GENSCAN 1.0	Date run:  7-Nov-116	Time: 17:02:43

Sequence gi568815597r:110417255_110618787 : 201533 bp : 48.53% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  33963  34034   72  2  0   78   98    37 0.630   3.32
 1.02 Intr +  36707  36832  126  1  0  130   73   146 0.991  18.18
 1.03 Term +  38978  39097  120  1  0  107   48   123 0.996   8.67
 1.04 PlyA +  40082  40087    6                               1.05

 2.06 PlyA -  40791  40786    6                              -0.45
 2.05 Term -  41440  41135  306  1  0   66   43   131 0.484   1.52
 2.04 Intr -  46469  46307  163  1  1   81   99     2 0.203   0.58
 2.03 Intr -  47114  46946  169  0  1   64   69   137 0.489   8.40
 2.02 Intr -  49115  49017   99  0  0   54  109    78 0.715   6.58
 2.01 Init -  51440  51383   58  2  1   84   95    53 0.984   7.07
 2.00 Prom -  59369  59330   40                              -1.96

 3.00 Prom +  63451  63490   40                              -3.96
 3.01 Init +  63512  63573   62  1  2   72  109    33 0.984   4.68
 3.02 Intr +  65521  65671  151  1  1   92   76   152 0.995  14.56
 3.03 Intr +  66660  66777  118  2  1   97   72   144 0.976  13.74
 3.04 Intr +  67452  67690  239  1  2   -2  103   151 0.434   4.93
 3.05 Intr +  69602  69756  155  1  2   99   12   217 0.905  14.07
 3.06 Intr +  71248  71380  133  1  1   42   94   100 0.198   6.65
 3.07 Intr +  72120  72317  198  2  0  -85   78   317 0.837  12.95
 3.08 Intr +  72918  73016   99  2  0   19   80   189 0.999  11.51
 3.09 Term +  73780  73917  138  0  0  107   38   132 0.886   8.06
 3.10 PlyA +  73996  74001    6                               1.05

 4.04 PlyA -  76294  76289    6                              -0.45
 4.03 Term -  76986  76855  132  0  0   98   35    73 0.137   1.09
 4.02 Intr -  84561  84367  195  0  0   78   47    94 0.206   3.91
 4.01 Init -  87173  87072  102  2  0   64   50    56 0.085  -0.36
 4.00 Prom -  92947  92908   40                              -4.16

 5.13 PlyA -  94078  94073    6                               1.05
 5.12 Term - 101534  99998 1537  1  1   99   43  1872 0.069 173.75
 5.11 Intr - 113071 112952  120  0  0   76   47    73 0.019   1.61
 5.10 Intr - 116202 116142   61  1  1   85   64    67 0.022   1.79
 5.09 Intr - 131637 131563   75  1  0   26   95   127 0.159   6.69
 5.08 Intr - 132180 132102   79  0  1   45   75    49 0.087  -1.58
 5.07 Intr - 133971 133918   54  0  0   97   75    30 0.004   1.78
 5.06 Intr - 142338 142234  105  0  0   68   53    61 0.002   1.01
 5.05 Intr - 150113 149928  186  2  0   55   47   106 0.075   3.09
 5.04 Intr - 155453 155350  104  0  2    4   75   143 0.063   4.49
 5.03 Intr - 165100 164998  103  1  1   93   81    55 0.604   5.05
 5.02 Intr - 167320 167143  178  0  1   66   75    93 0.800   5.72
 5.01 Init - 167477 167449   29  2  2   78  106     8 0.636   0.70
 5.00 Prom - 176404 176365   40                              -4.86

 6.03 PlyA - 177747 177742    6                               1.05
 6.02 Term - 187468 186029 1440  1  0   87   38  1152 0.628 100.92
 6.01 Init - 190024 189710  315  1  0   94   32   172 0.097   9.55

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:110417255_110618787|GENSCAN_predicted_peptide_1|105_aa
MRGATRVSIMLLLVTVSDCAVITGACERDVQCGAGTCCAISLWLRGLRMCTPLGREGEEC
HPGSHKVPFFRKRKHHTCPCLPNLLCSRFPDGRYRCSMDLKNINF

>gi568815597r:110417255_110618787|GENSCAN_predicted_CDS_1|318_bp
atgagaggtgccacgcgagtctcaatcatgctcctcctagtaactgtgtctgactgtgct
gtgatcacaggggcctgtgagcgggatgtccagtgtggggcaggcacctgctgtgccatc
agcctgtggcttcgagggctgcggatgtgcaccccgctggggcgggaaggcgaggagtgc
caccccggcagccacaaggtccccttcttcaggaaacgcaagcaccacacctgtccttgc
ttgcccaacctgctgtgctccaggttcccggacggcaggtaccgctgctccatggacttg
aagaacatcaatttttag

>gi568815597r:110417255_110618787|GENSCAN_predicted_peptide_2|264_aa
MRLSDIGKGESPDDHRGQAAAKTLACQTSSPEIQIQWLWDAAQDPGYFTSTPASGELKHI
REKIVRSFLDILLVYLTEEIPPGNASVVCWLQHVGAIFIIAIVQMGKLRYTETNMSVTDA
QQSLSSRQGAETGKDLLDKRTINHILPVTWTKWSSQDPSTAPQGGSQFRKGSTKVHQAAV
NGTSRKAMNVKGQAMVKMESWTWKGTLYPGPEPETKGESDSRAARRSQVTTAGDNVRKRR
QKQKQKQTKKGPCGGLAWLKWVLE

>gi568815597r:110417255_110618787|GENSCAN_predicted_CDS_2|795_bp
atgaggctcagtgacattggcaagggtgaaagcccagatgaccacaggggccaggcagct
gctaaaactctagcttgccagacttcctctccagaaatccagatccagtggctctgggat
gcggcacaggaccctgggtacttcacaagcaccccagcttctggggaattgaagcacatc
cgagaaaagattgttcgttccttcctggacatcttattggtttacctcactgaagagatc
cctccaggtaatgctagtgtggtgtgctggttacaacacgtaggtgctatttttattatt
gccattgtacagatggggaaactgaggtacacagaaacaaatatgtctgtgactgacgcg
cagcagagtctatcgagtaggcagggggctgagacaggaaaggatcttttggacaaaagg
accataaatcatatccttcctgtgacctggaccaagtggtcttcccaagacccaagcact
gcccctcagggagggtcacaatttagaaagggctccacaaaagtccaccaggcagcagtc
aatggtacctcgagaaaagctatgaatgtcaaaggacaagccatggtcaaaatggaatcc
tggacgtggaagggaactttatatccaggacctgagcctgaaaccaagggagaaagcgac
tcaagggctgcaagaaggtcccaagtcaccacagcaggtgacaatgtccgtaaaaggaga
caaaaacaaaaacaaaaacaaacaaagaaaggaccctgtgggggcctggcctggcttaag
tgggtcctggagtaa

>gi568815597r:110417255_110618787|GENSCAN_predicted_peptide_3|430_aa
MRGLVVFLAVFALSEVNAITRVPLHKGKSLRRALKERRLLEDFLRNHHYAVSRKHSSSGV
VASESLTNYLDCQYFGKIYIGTLPQKFTLVFDTGSPDIWVPSVYCNSDACQRIASIEAIF
LQGLLRGSALAGTVSGEKILRAPLTLGLCFRKPPTLRSVQVLHPQNMGKSLSIQYGTGSM
RGLLGYDTVTDLVEVMILLQVSNIVDPHQTVGLSTQEPGDVFTYSEFDGILGLAYPSLAS
EYALRLGFRNDQGSMLTLRAIDLSYYTGSLHWIPMTARILAVHCGQEGPGEGGLDEAILH
TFGSVIIDGVVVACDGGCQAILDTGTSLLVGPGGNILNIQQAIGATAGQYNEFDIDCGRL
SSIPTAVFEIHGKKYPLPPSAYTSQDQGFCTSGFQGDYSSQQWILGNVFIWEYYSVFDRT
NNRVGLAKAV

>gi568815597r:110417255_110618787|GENSCAN_predicted_CDS_3|1293_bp
atgaggggccttgtggtattccttgcagtctttgctctctctgaggtcaatgccatcacc
agggttcctctgcacaaagggaagtcgctgaggagggccctgaaggagcgcaggctcctg
gaggacttcctgaggaatcaccattatgcagtcagcaggaagcactccagctctggggtg
gtggccagcgagtctctgaccaactacctggattgtcagtactttgggaagatctacatc
gggacccttccccagaagttcaccttggtgtttgatacaggctccccggatatctgggtg
ccctctgtctactgcaacagtgatgcctgtcagagaattgccagtattgaggccatattc
ttacaaggcctgctgaggggttcggccctggctggcaccgtgagtggtgagaagattcta
agggccccactaactctgggtctgtgtttcagaaaaccaccaacgcttcgatccgtccaa
gtcctccacccacagaacatgggcaagtccctgtccatccagtatggcacaggcagcatg
cggggcttgctgggctatgacactgtcaccgacctagtggaggtcatgattctcttgcag
gtctccaacattgtggacccccaccagactgtgggtctgagcacccaggaacctggcgac
gtcttcacctactccgagtttgatgggatcctggggctggcctatccctctcttgcctct
gagtacgcgctgcgccttggtttcaggaatgaccaggggagcatgctcacgctgagggcc
attgatctgtcgtactacacaggctccctgcactggatacccatgactgcaagaatactg
gcagttcactgtggacaggaaggacctggggagggagggctggatgaggccatcttgcat
acctttggaagtgtcatcattgacggcgtggtggtggcctgtgacggtggctgtcaggcc
atcctggacaccggcacctccctgctggtggggcctggcggcaacatcctcaacatccag
caggccattggagccactgcgggccagtacaatgagtttgacatcgactgcgggcgcctg
agcagcattcccacggctgtcttcgagatccacggcaagaagtaccccctgccaccctcc
gcctataccagccaggaccagggcttctgcaccagtggtttccagggtgactatagttcc
cagcagtggatcctggggaatgtcttcatctgggagtattacagtgtctttgacaggacc
aataaccgtgtggggctggcgaaggctgtctga

>gi568815597r:110417255_110618787|GENSCAN_predicted_peptide_4|142_aa
MFPGLAAATPQWNPPPPMGIEGTPPQSCPMTVAEQARESTSKTESTGFANQTHCFGVFYL
LQASHKIQSTLKTRGLHKGMLTRKQGLLEAILEGYQPQGVGPLHKQTTDVLVAPSQSLLI
HHLAQPSEGLTTETNVDPVPEP

>gi568815597r:110417255_110618787|GENSCAN_predicted_CDS_4|429_bp
atgttccctggcttagcagcagcgactcctcagtggaacccaccaccgcccatgggcata
gagggcaccccaccacagagctgtcctatgacggtggcagagcaagcaagagagagtaca
agcaagacagaatccacgggctttgcaaaccaaacgcattgctttggtgtcttctatttg
ttacaagcaagtcacaaaatccagtccacactcaagacgagagggttacacaagggcatg
ctgaccaggaagcagggattactggaggccattttggaaggttatcaaccacagggggta
ggccctcttcataagcaaaccacggatgtgctggtggccccttcccaaagcctcctcatt
caccacctggcacagccctcagaaggcctgaccacagagaccaatgtggaccccgtccca
gaaccataa

>gi568815597r:110417255_110618787|GENSCAN_predicted_peptide_5|876_aa
MERNLSKSTNLMELRSFSVLPACQQFPQASHDLLKWSHPIYKTVWGFAYTQQGPRKCDRP
MFFPVLQMQHSFKQGLNVQPSDPHASWTTLAQGEKSGLQGYLEEQLINTDSPCEISAILR
EEETTVNPYYIYKLCTFQSEGQLQVLCSKVQYKVNSCNPKEKVSQNPWSISTTLTQGMRI
SPPQDVKRCQAQKVMDSPEYAEEGQIFPEQEFPKPDADLHSAMRSGVTDPPPSHKIPCRG
EHISGSPVSHIKQTTGGRVKAKAFKGVQNSSSNVTTIGRGQLVLKALTKAVHEKKTRPGY
CQTPAGTDTTVPTSGSSAALASGASRWAEAHRKLFSARQGPVTEETRKAMPDLISQSRKV
SYEQGMDVCGWKEMEVALVNFDNSDEIQEEPGYATDFDSTSPKGRPGGSSFSNGKILISE
STNHETAFSKLPGDYADPPGPEPVVLNEGNQRVIINIAGLRFETQLRTLSQFPETLLGDR
EKRMQFFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPANVPIDIFADEISFYELGSEA
MDQFREDEGFIKDPETLLPTNDIHRQFWLLFEYPESSSAARAVAVVSVLVVVISITIFCL
ETLPEFREDRELKVVRDPNLNMSKTVLSQTMFTDPFFMVESTCIVWFTFELVLRFVVCPS
KTDFFRNIMNIIDIISIIPYFATLITELVQETEPSAQQNMSLAILRIIRLVRVFRIFKLS
RHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEVDEPESHFSSIPDGFWWA
VVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENEEKQN
IPGEIERILNSVGSRMGSTDSLNKTNGGCSTEKSRK

>gi568815597r:110417255_110618787|GENSCAN_predicted_CDS_5|2631_bp
atggaaaggaacttgtccaagagcacaaacctcatggagctgaggagcttctcagtgcta
cccgcctgccagcagttccctcaagcttcccacgatcttctgaaatggagccatcctatt
tacaaaacggtgtggggattcgcctacacgcagcagggaccccgaaagtgtgatcgcccc
atgttctttccagttctacagatgcagcactcatttaagcaaggattgaatgttcagccc
tcagatcctcatgcttcctggaccaccttagctcaaggggagaagtctggcctccaaggc
taccttgaagagcaactaatcaacactgactcgccctgtgaaatctcagccatcctcaga
gaggaagaaacaactgtgaacccctattacatctacaagctgtgcaccttccagtcagaa
ggacagcttcaggtcctttgcagcaaagtccagtacaaagtgaactcatgcaaccccaaa
gagaaggtctcccagaacccctggtcaatttccactaccctcacccaagggatgagaatt
tctccaccacaagatgttaaaagatgtcaggctcagaaagtcatggattcaccagagtat
gcagaagaaggccagatttttccagaacaagagttccctaaacctgatgcagatctgcac
tcagccatgcgctctggggtgacagatcctccaccctctcacaagatcccctgccgagga
gagcacatctcaggatcacctgtcagccacatcaagcagacaacaggaggcagggtaaag
gctaaggccttcaagggggtccagaacagcagcagcaatgtaacgactatagggagaggg
cagcttgtgctgaaggctcttaccaaggctgtccacgagaagaagacccgtccaggctac
tgtcagaccccagctggaactgacactacagtgcccaccagcggcagctcagctgccctg
gcatctggagccagcaggtgggcggaggcccatcgtaaactcttcagtgccaggcagggg
ccagtcactgaggagaccaggaaagcgatgcctgacttgatcagccagtcacgcaaggtc
tcctatgagcagggaatggatgtgtgtggctggaaagaaatggaggttgcgctggtcaat
tttgataattcagatgaaatccaagaagagccaggctatgccacagacttcgactcaacc
agcccaaaaggccggcctgggggcagctccttctccaacgggaagatcctcatcagcgaa
agcaccaaccatgagacggccttctccaagcttccgggagactatgctgaccccccaggg
cctgagccagtggtcctaaatgaaggaaaccagcgggtgatcatcaacattgctgggctg
agatttgagacccagctcagaacccttagtcagttcccagagactctcctgggagaccgg
gaaaaaaggatgcagttctttgactccatgagaaatgagtatttctttgatcggaaccgg
cccagttttgatggaatcctatattattaccaatctggtgggaaaattcggcgcccagcc
aatgttcccattgatatctttgctgatgaaatctccttctatgagctgggtagtgaggcc
atggaccagttccgggaggatgaaggcttcatcaaagaccctgaaacactgctacccacc
aatgacatccaccgtcagttctggctcctctttgagtaccctgaaagttccagcgctgcc
cgtgctgtggccgtggtctcggtgttggttgtggtcatctccatcaccatcttctgcctg
gagacactgccagagttccgggaggatagggagctaaaggtggtcagagaccccaatctc
aacatgagcaagacagtcctctcccagaccatgttcaccgaccctttcttcatggtggag
tctacctgcatcgtgtggttcaccttcgagctggtgctccggttcgtggtctgccccagc
aagactgacttcttcaggaacatcatgaacatcattgacatcatctccattatcccctac
tttgcaactctcatcacagagctagtccaggagacagagccgagtgcccaacagaacatg
tccctggccatcctgaggatcatccgcctggtgagggtcttccgcatcttcaagctctcg
cgccactccaaggggctgcagatcctcgggcaaacactgaaggcgtccatgcgggagttg
gggttgctcatcttctttctcttcattggagtcatcctcttctccagtgcagtctacttt
gctgaggtggatgagccagagtcccatttctctagcattcctgatggcttctggtgggca
gtggtcaccatgacaactgtaggctatggggacatgtgcccgaccaccccaggggggaag
attgtgggcactctgtgtgccattgcaggggtcctcaccattgccctccctgtgcctgtc
attgtctccaacttcaattacttctaccaccgggagactgagaatgaagaaaagcagaac
atcccaggagaaattgaaagaatcctcaacagtgtaggctcaagaatgggcagcacagac
tctcttaataagaccaatggtggctgttccacagagaagtctaggaaatga

>gi568815597r:110417255_110618787|GENSCAN_predicted_peptide_6|584_aa
MEAPVPIRKGKSVSGRCAARAAFPARLRRPEGLRGTRRRSLQRSRLGLSPRRQALADHCR
LLGRSQTGEIKGNLHPAQEECTEWARDPLGFAWRGAEGTERSWWVDTYDPEADHECCERV
VINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSG
GRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEY
PESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQS
TSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELA
EKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFL
FIGVILFSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCA
IAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSCPKIPSSPDLKKSRSASTISK
SDYMEIQEGVNNSNEDFREENLKTANCTLANTNYVNITKMLTDV

>gi568815597r:110417255_110618787|GENSCAN_predicted_CDS_6|1755_bp
atggaggccccggtgcccatccggaagggtaaatccgtgtcggggcgttgcgcggcgcgt
gctgccttccctgcccggctgcggcgcccagaggggctgcggggcacccggcggcgcagc
ctgcagcgcagcaggcttgggctgagtccgcggcggcaagcccttgccgaccactgccgt
ctgctcggcaggtcccagaccggggagatcaaggggaacttgcaccctgctcaagaagag
tgcacagaatgggctcgggaccctctggggtttgcgtggcgcggggcggagggcacggag
aggagctggtgggtggacacctatgacccagaggcagaccacgagtgctgtgagagggtg
gtgatcaacatctcagggctgcggtttgagacccagctaaagaccttagcccagtttcca
gagaccctcttaggggacccaaagaaacgaatgaggtactttgaccccctccgaaatgag
tactttttcgatcggaaccgccctagctttgatgccattttgtactactaccagtcaggg
ggccgattgaggcgacctgtgaatgtgcccttagatatattctctgaagaaattcggttt
tatgagctgggagaagaagcgatggagatgtttcgggaagatgaaggctacatcaaggag
gaagagcgtcctctgcctgaaaatgagtttcagagacaagtgtggcttctctttgaatac
ccagagagctcagggcctgccaggattatagctattgtgtctgtcatggtgattctgatc
tcaattgtcagcttctgtctggaaacattgcccatcttccgggatgagaatgaagacatg
catggtagtggggtgaccttccacacctattccaacagcaccatcgggtaccagcagtcc
acttccttcacagaccctttcttcattgtagagacactctgcatcatctggttctccttt
gaattcttggtgaggttctttgcctgtcccagcaaagccggcttcttcaccaacatcatg
aacatcattgacattgtggccatcatcccctacttcatcaccctggggacagagttggct
gagaagccagaggacgctcagcaaggccagcaggccatgtcactggccatcctccgtgtc
atccggttggtaagagtctttaggattttcaagttgtccagacactccaaaggtctccag
attctaggtcagaccctcaaagccagcatgagagaattgggcctcctgatattctttctc
ttcataggggtcatccttttctctagtgctgtgtattttgcagaggccgatgagcgagag
tcccagttccccagcatcccagatgccttctggtgggcagtcgtctccatgacaactgta
ggctatggagacatggttccgactaccattgggggaaagatagtgggttccctatgtgcg
attgcaggtgtgttaactattgccttaccggtccctgtcattgtgtccaatttcaactac
ttctaccaccgggagacagagggagaggaacaggcccaatacttgcaagtgacaagctgt
ccaaagatcccatcctcccctgacctaaagaaaagtagaagtgcctctaccattagtaag
tctgattacatggagatccaggagggtgtaaataacagtaatgaggactttagagaggaa
aacttgaaaacagccaactgtaccttggctaacacaaactatgtgaatattaccaaaatg
ttaactgatgtctga