GENSCAN 1.0	Date run:  7-Nov-116	Time: 16:49:37

Sequence gi568815584r:31382967_31583965 : 200999 bp : 39.59% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.16 Intr -    805    555  251  2  2  119   90   204 0.970  19.93
 1.15 Intr -   3609   3454  156  1  0   40   76    89 0.037   1.96
 1.14 Intr -   4409   4154  256  2  1   87   47    68 0.054  -1.31
 1.13 Intr -   6036   5879  158  1  2   47   47   191 0.047   9.71
 1.12 Intr -  11260  11086  175  1  1   40   99   151 0.803   9.99
 1.11 Intr -  12382  12233  150  1  0   21   93   108 0.933   4.04
 1.10 Intr -  15815  15707  109  1  1   70  107    49 0.991   4.37
 1.09 Intr -  17546  17335  212  2  2  102   87   179 0.996  15.99
 1.08 Intr -  37298  37186  113  0  2    8   96   103 0.006   2.28
 1.07 Intr -  44077  43919  159  2  0   79   89   145 0.108  12.74
 1.06 Intr -  62753  62669   85  2  1   63   69    98 0.111   3.87
 1.05 Intr -  65488  65214  275  2  2   84   36   132 0.224   3.93
 1.04 Intr -  69331  69191  141  2  0   94   67    43 0.804   2.20
 1.03 Intr -  70378  70309   70  1  1   70   71    69 0.837   1.24
 1.02 Intr -  74134  73967  168  1  0   74   41    73 0.283   0.42
 1.01 Init -  74427  74317  111  0  0   80   82   164 0.882  13.58
 1.00 Prom -  96562  96523   40                              -6.05

 2.02 PlyA -  96600  96595    6                               1.05
 2.01 Sngl - 100765  99998  768  1  0   60   37   260 0.840  13.92
 2.00 Prom - 108001 107962   40                              -8.55

 3.00 Prom + 108717 108756   40                              -5.75
 3.01 Init + 112472 113041  570  1  0   62   90   315 0.305  24.23
 3.02 Term + 138588 138674   87  2  0   81   49    83 0.026   0.38
 3.03 PlyA + 138821 138826    6                               1.05

 4.03 PlyA - 139885 139880    6                               1.05
 4.02 Term - 140523 140295  229  2  1  126   37   176 0.976  11.42
 4.01 Init - 144988 144864  125  1  2   23   46   159 0.665   4.89
 4.00 Prom - 152624 152585   40                              -0.85

 5.04 PlyA - 152639 152634    6                               1.05
 5.03 Term - 167081 166930  152  0  2   20   40   163 0.208   1.79
 5.02 Intr - 178591 178458  134  0  2   93   42   180 0.526  13.27
 5.01 Intr - 193874 193713  162  1  0   78   44    85 0.014   1.27

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -   3601   3454  148  1  1   73   76    93 0.884   6.90


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:31382967_31583965|GENSCAN_predicted_peptide_1|863_aa
MAEGSRIPQARALLQQCLHARLQIRPADGDVAAQWVEHHRSPAPVVAPERKSVSPFLGGP
QVFETEFGELQALLSQTPCSSWSMLVGGKLVGQVQRGLVIYVCFFKGADKELLPKMEPLT
EAVDDTVYTRCGSHQTWTTQVYIIIMEEFALAMCALPCGNKNRFNTLLNVKLSETENGKH
VSILDLPGNILIIPQATLGGRLKGRNMQYHSNSGKEEGFELYSQFVTLCEKEVAANSKCA
EARVVVEHGTYGNRQLFWPKVLKESSTDILSSQYMYDEDSAVERTFWQANMDEQTKDFVL
IPFSPTFIDSPQTPPSHFLKSATDSIMQNLLSLATAGLESAEKGLTGAQGRLINSVVRSS
SWTTGKSGFTCAQQNDVREKQKTLVEQLLSLLNSSPGPPTRKLLAKNLAILYSIGDTFSV
HEAIDKCNDLIRSKDDSPSYLPTKLAAVVCLGSLYKKLGRILGNTFTDTVGNILKAMKSA
ESQGRYEIMLSLQNILNGLGAAAAPCHRDVYKAARSCLTDRSMAVRCAAAKCLLELQNEA
IFMWSTDLDSVATLCFKSFEGSNYDVRISVSKLLGIILAKAVISKHPGTASRQSIRRVSL
EEVLELLGTGFLRGSSGFLRASGDMLKGTSSVSRDVRVGVTQAYVVFVSTLGGAWLEKNF
AAFFSHILSLASPSHPKATQTQIDAVCCRRCVSFILRTTIGGLLGEKAQLAAVKDICQAI
WKLKKVMDAVMSDGNLETRLGSTDVAASQHMLVCALQELGNLIHNLGTTAAPLLQDSSTG
LLDSILSVILHPSISVRLAAAWCLHCIAVALPSYLTPLLDRCLERLTGHKSSPEAVTGFS
FAVAALLGAVKHCPLGIPHGKGK

>gi568815584r:31382967_31583965|GENSCAN_predicted_CDS_1|2589_bp
atggctgagggtagccggattcctcaggcccgggcgctcctacagcagtgcctgcacgcc
cggctgcaaattcgcccagccgatggggacgtcgcggcccagtgggtggagcatcaccgt
tccccagcgccagttgtagcacccgagaggaagagcgtgtctcccttcttggggggacca
caggtatttgaaactgagttcggtgaacttcaggccttactgtctcagaccccttgcagc
tcgtggtctatgctggtcgggggcaagcttgtaggtcaggtccaaagaggactggtgatc
tacgtgtgctttttcaagggagctgataaagaacttcttcccaaaatggagcccctaaca
gaggcagtagatgacactgtatatacaagatgtgggtctcatcaaacctggacaactcaa
gtttatatcattattatggaagaatttgcattagccatgtgtgcacttccttgtggaaat
aagaatagatttaatacactgttaaatgtgaaattaagtgagacagaaaatggcaagcat
gtctctatattggatctacctggcaacattcttattatccctcaagctacccttggagga
agactaaaaggaagaaacatgcaatatcactctaactctggaaaagaagaagggtttgaa
ctttactctcaatttgtgactctatgtgaaaaagaagtagctgctaatagcaagtgtgct
gaagctagggttgtagtggaacatggcacttatgggaacaggcagctcttctggcccaag
gtgctcaaagaatcttcaacagatattttatcttcacagtatatgtatgatgaggatagc
gctgtggaaaggactttctggcaggcaaacatggatgagcagaccaaggactttgtttta
attccgtttagcccgacttttattgattccccacaaacaccaccttcccacttcttaaag
tctgctacagattccattatgcagaacctgctgtccctggccactgcagggctggagtcc
gccgagaaggggctgactggggcacagggtcggctgataaacagcgtggtccgttcttcc
tcctggactacgggaaagtctggcttcacctgtgcacaacagaatgatgtaagggagaaa
cagaagactcttgttgaacagctcctgtctttgttgaacagctccccagggcctcctacc
cgcaaactgcttgctaagaatctagccatactttatagtattggagacacattctccgtt
catgaagcaatcgataaatgtaatgatcttattcgtagcaaagatgattctccaagttat
cttcccactaagcttgctgctgtggtatgtttgggttccttgtacaagaagttgggtaga
atactgggtaacacctttactgatacagtggggaatattcttaaagctatgaagagtgca
gagtctcaaggccgatatgagattatgctaagtctgcaaaatatattgaatggactagga
gctgccgctgcaccttgtcacagggatgtttataaagctgctagatcctgcttgacagat
agatccatggctgttcgttgtgctgctgcaaagtgtctccttgaacttcagaatgaagcc
atctttatgtggagtacggacctggacagtgtggccacactgtgttttaagtcctttgaa
ggttccaattatgatgtgcggatttctgtttcaaagttactaggcataatattagctaaa
gctgtaatttctaaacatccaggaacagcctcacgtcaaagcattcgcagagtatctttg
gaggaagttctggaattactaggaacagggtttctacgtgggagttcaggattccttcga
gccagtggagatatgctgaaaggaaccagttcagtcagtagggatgttcgagttggagtt
actcaggcttatgtggtatttgtttcaacactaggaggagcttggctagagaaaaatttt
gctgcctttttttctcatatcctaagccttgcgtcaccgtcacaccctaaagccacccaa
actcagatcgatgccgtctgctgtcgccgttgtgtttcatttattcttcgaactactata
ggtggtcttcttggagaaaaggctcagcttgctgctgtaaaggatatttgccaggccatc
tggaagctaaagaaagttatggatgccgtaatgagtgatggtaatttggaaacccggctt
ggttccacagatgtagccgctagccaacatatgctggtttgtgctttacaagaacttgga
aatctcatacacaatcttggcaccacagcggcacctttgctacaggattcaagtacaggt
ctccttgacagtatcttgtcagttattcttcatcctagcatttctgttcgactagcagca
gcttggtgtttacactgcattgccgtggcattaccctcctacctaacaccactcttggat
cgttgccttgaacggcttactggacataagtcttcacctgaagcagtgactggcttcagt
tttgctgtagcagctttgttgggagcagtaaaacattgtcctttaggaattcctcatgga
aaaggcaag

>gi568815584r:31382967_31583965|GENSCAN_predicted_peptide_2|255_aa
MILPFMATSQLQDNHWNFGTALCKVFNGTLSLGMFTSVFFLSAIGLDRYLLTLHPVWSQQ
HRTPRWASSIVLGVWISAAALSIPYLIFRETHHDRKGKVTCQNNYAVSTNWESKEMQASR
QWIHVACFISRFLLGFLLPFFIIIFCYERVASKVKERSLFKSSKPFKVMMTAIISFFVCW
MPYHIHQGLLLTTNQSLLLELTLILTVLTTSFNTIFSPTLYLFVGENFKKVFKKSILALF
ESTFSEDSSVERTQT

>gi568815584r:31382967_31583965|GENSCAN_predicted_CDS_2|768_bp
atgattctgccatttatggccacctcccaacttcaagacaatcactggaactttggaact
gccttgtgcaaggtcttcaatggcactttgtctctggggatgttcacctctgttttcttc
ctttcggccatcggtcttgatcgttaccttctcactcttcacccagtgtggtcccagcag
caccgaaccccgcgctgggcttccagcattgtcctgggagtctggatttcagccgctgcc
ctcagcatcccctatttgattttcagagagacacatcatgaccgtaaaggaaaggtgact
tgccaaaataactatgctgtgtctactaactgggaaagcaaggagatgcaagcatcaagg
cagtggattcatgtggcctgtttcatcagccgcttcttgctgggctttcttctgcctttc
ttcatcatcatcttttgttatgaaagagtagccagcaaggtgaaagagaggagcctgttt
aaatccagcaagcccttcaaagttatgatgactgccattatctctttctttgtgtgttgg
atgccctaccatatacaccagggcttacttctcactacgaaccagtcactacttttagag
ttgactttgatacttacagtgctaaccacttctttcaatactatcttttctcccacactc
tacttatttgttggggagaatttcaaaaaggtcttcaagaagtccattcttgctctgttt
gagtcaacatttagtgaagattcttctgtagaaaggacacaaacctaa

>gi568815584r:31382967_31583965|GENSCAN_predicted_peptide_3|218_aa
MRKTQHKNAENSINQNASSPPNDSNSSPARAQNGTENEFDKLAEVGFRRWVITNSSELKE
HVLTQCKETKSLDKRLQELLTRKASFGRHRARCRKFFFIPQWRLEPQQDRTVHSSGKQAE
AREPSGLTHINELMELRNTAREIREAYTGINSRTDQAEERISEIEDQLNEIKRENKIREK
RMKRNEQSLQGKASFDELGSGVTPGSIANGNQWQSQLP

>gi568815584r:31382967_31583965|GENSCAN_predicted_CDS_3|657_bp
atgaggaaaacccagcacaaaaatgctgaaaattccataaaccagaatgcttcttctcct
ccaaatgatagcaactcctctccagcaagggcacaaaatgggacggagaatgagtttgac
aaattggcagaagtaggcttcagaaggtgggtaataacaaactcctctgagctaaaagag
catgttctaacccaatgcaaggaaactaagagccttgataaaagattacaagaactgcta
actagaaaagccagttttggcagacaccgagctcgctgcaggaagttttttttcataccc
caatggcgcctggaaccccagcaagacagaactgttcactcttctggaaagcaggctgaa
gccagggagccaagtggtctcactcacataaatgaactgatggaactgagaaacacagca
agagaaattcgtgaagcatacacaggtatcaatagccgaactgatcaagcggaagaaagg
atatcagagattgaagatcaacttaatgaaataaagcgtgaaaacaagattagagaaaaa
agaatgaaaaggaatgaacaaagcctccaggggaaggcgtcatttgacgagcttgggtca
ggtgtcacccctggatcaatcgccaatggcaatcaatggcaatcacagttaccttga

>gi568815584r:31382967_31583965|GENSCAN_predicted_peptide_4|117_aa
MHGGKATGGHSEKVATCKPGREPLEETNPASTLVLDFQPPELYLLNKYKAHVPVTLIVLS
QNGIIKGTQSKNKQEFKNKASPLLVLSEHQEESTQFTSTLLKIPFYAVPSTVLTHPR

>gi568815584r:31382967_31583965|GENSCAN_predicted_CDS_4|354_bp
atgcacggaggaaaggccacaggaggacacagtgagaaggtggccacctgcaagccagga
agagagcccttagaagaaaccaatccagctagcaccttggtcttggacttccagcctcca
gaactatatttactaaataaatataaagctcatgtacctgtgacccttatagttctatcc
cagaatggcatcatcaaaggcacacagtccaagaacaaacaggagttcaaaaataaagca
agtcctttacttgtgttgtccgaacaccaagaagaaagcacacagttcacatcaacactt
cttaaaatccctttctatgctgtcccatccactgtcctcacacatccccggtag

>gi568815584r:31382967_31583965|GENSCAN_predicted_peptide_5|149_aa
XAATKLVSEKPPDKLPMKSPFFTWNRKQDHVLGIRKLELDRGPDKSGNDLEEHLCTTDLA
PTNHRSASPKRGSGPATSPERHPTKKQQTLPNPHDAERCSWAMEVRPSKKKKREKKEKEE
EEEEEQEEEEKEEKEERKRGRRRRRKRRS

>gi568815584r:31382967_31583965|GENSCAN_predicted_CDS_5|450_bp
nnggcagctaccaaacttgtgagtgaaaagcctccagataagttaccaatgaaaagtcca
tttttcacatggaataggaagcaagaccatgtgctaggaataaggaaattggaattggat
agaggacctgataaaagtgggaacgatttagaagagcatctgtgcaccacggacctggcg
cccacaaaccatcgctcggcttcccccaagcggggcagtggccccgccaccagcccggag
cgacaccccaccaaaaagcagcagacgctgccaaatccccatgacgcggaacgctgctcc
tgggcaatggaagtgagaccgtcaaaaaaaaaaaagagggagaagaaggagaaggaggag
gaggaagaggaggagcaggaggaggaagagaaggaggagaaggaggagaggaagagagga
agaaggagaaggagaaagagaagaagttga