GENSCAN 1.0	Date run:  7-Nov-116	Time: 16:20:03

Sequence gi568815596f:73826911_74058247 : 231337 bp : 44.90% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2495   2600  106  2  1  114   69     0 0.402   0.92
 1.02 Intr +   3935   4149  215  1  2   95   76   153 0.834  12.31
 1.03 Intr +   9312   9518  207  0  0   31   81   103 0.653   2.09
 1.04 Intr +  17903  17978   76  2  1   56   98    51 0.911   2.42
 1.05 Intr +  18257  18352   96  1  0   92   86    99 0.984  10.31
 1.06 Intr +  20477  20843  367  1  1   64   86   337 0.940  25.82
 1.07 Intr +  22453  22577  125  2  2   95   58    74 0.993   5.40
 1.08 Intr +  23466  23603  138  2  0   92   77    97 0.573   9.66
 1.09 Intr +  30211  30399  189  0  0   77   80    40 0.614   1.88
 1.10 Term +  35293  35349   57  0  0  116   53   100 0.896   6.99
 1.11 PlyA +  35924  35929    6                               1.05

 2.00 Prom +  57284  57323   40                              -3.56
 2.01 Init +  74402  74527  126  1  0   66   96   136 0.989  12.36
 2.02 Intr +  75450  75578  129  2  0  120   65   143 0.994  16.09
 2.03 Intr +  81763  81873  111  0  0   89  110    77 0.946  10.58
 2.04 Intr +  82145  82229   85  1  1   84  109   104 0.971  11.49
 2.05 Intr +  86575  86736  162  2  0  108   68   276 0.997  27.55
 2.06 Intr +  87770  87961  192  0  0  116   73   273 0.999  28.06
 2.07 Intr +  89674  89855  182  2  2   66   98   263 0.999  24.69
 2.08 Term +  92522  92665  144  1  0  121   39   151 0.997  11.41
 2.09 PlyA +  95715  95720    6                               1.05

 3.00 Prom +  98868  98907   40                              -5.96
 3.01 Init + 100001 100142  142  1  1   72   87   149 0.964  13.76
 3.02 Intr + 107442 107507   66  1  0   61   89    38 0.284   0.08
 3.03 Intr + 112000 112112  113  2  2   50  106    44 0.507   2.50
 3.04 Intr + 119809 119996  188  0  2  101   98   115 0.934  12.29
 3.05 Intr + 123675 123822  148  0  1   90   92   100 0.996  10.84
 3.06 Intr + 130215 130330  116  2  2   36  100    70 0.845   2.25
 3.07 Intr + 131236 131335  100  1  1   63   59   126 0.922   7.31
 3.08 Term + 131800 131826   27  0  0  138   41    10 0.934  -0.63
 3.09 PlyA + 132017 132022    6                               1.05

 4.00 Prom + 137732 137771   40                              -1.56
 4.01 Init + 159216 159274   59  2  2   90   75   120 0.931   9.68
 4.02 Term + 159388 159847  460  1  1   62   43   356 0.185  23.06
 4.03 PlyA + 160349 160354    6                              -5.12

 5.06 PlyA - 160482 160477    6                               1.05
 5.05 Term - 161014 160674  341  2  2   86   43   179 0.147   7.90
 5.04 Intr - 166437 166360   78  1  0   58   99    60 0.268   3.62
 5.03 Intr - 172184 172074  111  0  0   63   44    78 0.312   1.25
 5.02 Intr - 173885 173835   51  0  0   66  105    48 0.205   3.18
 5.01 Init - 182022 181953   70  0  1   77   76    50 0.065   3.91
 5.00 Prom - 191807 191768   40                              -2.56

 6.00 Prom + 196983 197022   40                              -3.86
 6.01 Init + 204269 204385  117  1  0   96  109     9 0.410   4.00
 6.02 Intr + 219368 221501 2134  1  1  115  123  1311 0.848 124.64

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 126344 126445  102  1  0  -11   44   225 0.950   6.48
S.002 Term + 183518 183636  119  0  2   99   48   103 0.883   6.10
S.003 Init + 217704 217845  142  2  1   69   97    90 0.871   6.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:73826911_74058247|GENSCAN_predicted_peptide_1|525_aa
XCCIPFLELLNQVVTGAASWPWEVVPFLTHKNLSQENLVLMSDHGDVSLPPEDRVRALSQ
LGSAVEVNEDIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITRETESVVSSQGL
ARRRNLRMGAGVEEVRRLPRQEQQLLQGSPAGQQAASGGSRQPPPPLHPVVPALPSRLFI
EKLPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEYTEYNEEKKKEAEE
LARNMAIQQELEKEKQRVAQQKQQQLEQEQFHAFEEMIRNQELEKERLKIVQEFGKVDPG
LGGPLVPDLEKPSLDVFPTLTVSSIQPSDCHTTVRPAKPPVVDRSLKPGALSNSESIPTI
DGLRHVVVPGRLCPQFLQLASANTARGVETCGILCGKLMRNEFTITHVLIPKQSAGSDYC
NTENEEELFLIQDQQGLITLGWIHWSLSFNTVEQYLSPMMPQMEGLSSVPGSSPYPTCLM
ARCLDAFSHQGSAPTVLHPTRNSRTHQSCSHVTVVDRAVTITDLR

>gi568815596f:73826911_74058247|GENSCAN_predicted_CDS_1|1578_bp
nnatgctgcatcccctttttggaattgctcaaccaggtggtaaccggcgccgcttcctgg
ccttgggaggtggttcctttcttaacccacaagaacctctcccaagagaacttggtcctg
atgtctgaccatggagatgtgagcctcccgcccgaagaccgggtgagggctctctcccag
ctgggtagtgcggtagaggtgaatgaagacattccaccccgtcggtacttccgctctgga
gttgagattatccgaatggcatccatttactctgaggaaggcaacattgaacatgccttc
atcctctataacaagtatatcacgagggagactgaatcagttgtgagcagccaagggctg
gcccgtcgtcggaacctccgaatgggggctggggtggaggaggtgaggcgattgccgagg
caggagcagcagctgttgcagggctctcctgcaggccagcaggcagcatctggaggctcc
cggcagcctccccctcccctccaccccgtggtgcccgcgctgccctcaaggctctttatt
gagaaactaccaaaacatcgagattacaaatctgctgtcattcctgaaaagaaagacaca
gtaaagaaattaaaggagattgcatttcccaaagcagaagagctgaaggcagagctgtta
aaacgatataccaaagaatatacagaatataatgaagaaaagaagaaggaagcagaggaa
ttggcccggaacatggccatccagcaagagctggaaaaggaaaaacagagggtagcacaa
cagaagcagcagcaattggaacaggaacagttccatgccttcgaggagatgatccggaac
caggagctagaaaaagagcgactgaaaattgtacaggagtttgggaaggtagaccctggc
ctaggtggcccgctagtgcctgacttggagaagccctccttagatgtgttccccacctta
acagtctcatccatacagccttcagactgtcacacaactgtaaggccagctaagccacct
gtggtggacaggtccttgaaacctggagcactgagcaactcagaaagtattcccacaatc
gatggattgcgccatgtggtggtgcctgggcggctgtgcccacagtttctccagttagcc
agtgccaacactgcccggggagtggagacatgtggaattctctgtggaaaactgatgagg
aatgaatttaccattacccatgttctcatccccaagcaaagtgctgggtctgattactgc
aacacagagaacgaagaagaacttttcctcatacaggatcagcagggcctcatcacactg
ggctggattcattggtctttgagttttaacactgtggaacagtatctttccccgatgatg
ccccagatggaaggtttgagttctgtccctgggtcctctccataccctacctgtttaatg
gcccgatgtcttgatgccttctcgcatcaaggctctgcgcctacagtccttcatccaacc
aggaattccagaacccatcagagctgcagccacgtgactgttgtggacagagcagtgacc
atcacagaccttcgatga

>gi568815596f:73826911_74058247|GENSCAN_predicted_peptide_2|376_aa
MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKM
TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD
LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS
YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
PEYDEAGPSIVHRKCF

>gi568815596f:73826911_74058247|GENSCAN_predicted_CDS_2|1131_bp
atgtgtgaagaggagaccaccgcgctcgtgtgtgacaatggctctggcctgtgcaaggca
ggcttcgcaggagatgatgccccccgggctgtcttcccctccattgtgggccgccctcgc
caccagggtgtgatggtgggaatgggccagaaagacagctatgtgggggatgaggctcag
agcaagcgagggatcctaactctcaaataccccattgaacacggcatcatcaccaactgg
gatgacatggagaagatctggcaccactccttctacaatgagctgcgtgtagcacctgaa
gagcaccccaccctgctcacagaggctcccctaaatcccaaggccaacagggaaaagatg
acccagatcatgtttgaaaccttcaatgtccctgccatgtacgtcgccattcaagctgtg
ctctccctctatgcctctggccgcacgacaggcatcgtcctggattcaggtgatggcgtc
acccacaatgtccccatctatgaaggctatgccctgccccatgccatcatgcgcctggac
ttggctggccgtgacctcacggactacctcatgaagatcctcacagagagaggctattcc
tttgtgaccacagctgagagagaaattgtgcgagacatcaaggagaagctgtgctatgtg
gccctggattttgagaatgagatggccacagcagcttcctcttcctccctggagaagagc
tatgagctgccagatgggcaggttatcaccattggcaatgagcgcttccgctgccctgag
accctcttccagccttcctttattggcatggagtccgctggaattcatgagacaacctac
aattccatcatgaagtgtgacattgacatccgtaaggacttatatgccaacaatgtcctc
tctgggggcaccaccatgtaccctggcattgctgacaggatgcagaaggagatcacagcc
ctggcccccagcaccatgaagatcaagattattgctcccccagagcggaagtactcagtc
tggatcgggggctctatcctggcctctctctccaccttccagcagatgtggatcagcaag
cctgagtatgatgaggcagggccctccattgtccacaggaagtgcttctaa

>gi568815596f:73826911_74058247|GENSCAN_predicted_peptide_3|299_aa
MAAGRLFLSRLRAPFSSMAKSPLEGVSSSRGLHAGRGPRRLSIEGNIGCGNITTENTGGQ
GPKGRFDAASVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGTQKACTAQSLGNLLDM
MYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFEN
GSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKGIELAY
LEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVNDDFSEEVTKQEDLMREVNTFVKNL

>gi568815596f:73826911_74058247|GENSCAN_predicted_CDS_3|900_bp
atggccgcgggccgcctctttctaagtcggcttcgagcacccttcagttccatggccaag
agcccactcgagggcgtttcctcctccagaggcctgcacgcggggcgcgggccccgaagg
ctctccatcgaaggcaacattggttgtggcaatataacaacagagaacactggtggccag
ggtcctaagggaaggtttgatgctgcttctgtgggaaagtccacgtttgtgaagttactc
acgaaaacttacccagaatggcacgtagctacagaacctgtagcaacatggcagaatatc
caggctgctggcacccaaaaagcctgcactgcccaaagtcttggaaacttgctggatatg
atgtaccgggagccagcacgatggtcctacacattccagacattttcctttttgagccgc
ctgaaagtacagctggagcccttccctgagaaactcttacaggccaggaagccagtacag
atctttgagaggtctgtgtacagtgacaggtatatctttgcaaagaatctttttgaaaat
ggttccctcagtgacatcgagtggcatatctatcaggactggcattcttttctcctgtgg
gagtttgccagccggatcacattacatggcttcatctacctccaggcttctccccaggtt
tgtttgaagagactgtaccagagggccagggaggaggagaaaggaattgagctggcctat
ctagagcagctgcatggccaacacgaagcctggcttattcacaagacaacgaagctccac
tttgaggctctgatgaacattccagtgctggtgttggatgtcaatgatgatttttctgag
gaagtaaccaaacaagaagacctcatgagagaggtaaacacctttgtaaagaatctgtaa

>gi568815596f:73826911_74058247|GENSCAN_predicted_peptide_4|172_aa
MIPFLRAAAGVLPQILGPSRLLTVLGEKDLLVAFGGGRKRLWFCPSTYDPTSGSIMSQFQ
VPLAVQPDLPGLYDFPQRQVMVGSFPGSGLSMAGSESQLRGGGDGRKKRKRCGTCEPCRR
LENCGACTSCTNRRTHQICKLRKCEVLKKKVGLLKEVSRPLLGYPVPSSRAR

>gi568815596f:73826911_74058247|GENSCAN_predicted_CDS_4|519_bp
atgatcccttttctgagggctgctgctggtgtcctcccccagatcctgggccccagcaga
ctcttgactgttctaggcgagaaggacctgttggtggcctttggaggtggcaggaaacga
ctgtggttctgccccagcacctatgaccccacctctggcagcatcatgagccagtttcag
gtgcccctggccgtccagccggacctgccaggcctttatgacttccctcagcgccaggtg
atggtagggagcttcccggggtctgggctctccatggctgggagtgagtcccaactccga
gggggtggagatggtcgaaagaaacggaaacggtgtggtacttgtgagccctgccggcgg
ctggaaaactgtggcgcttgcactagctgtaccaaccgccgcacgcaccagatctgcaaa
ctgcgaaaatgtgaggtgctgaagaaaaaagtagggcttctcaaggaggtaagccggccc
ttgctgggctaccctgttccttcctcgagggcacggtga

>gi568815596f:73826911_74058247|GENSCAN_predicted_peptide_5|216_aa
MPGGGVEKSNYLSTKGVKVPGLGGQRKDFAMLTYLPVNTAGLYFKALFKPCFLQEAFSDY
TSLLPTNGASNISHLTPGDANAAGPLSSKVEVRLWNIQVSQDSATGPAPPARCEALHSAV
RETQSTGCQPNASHRDPSPQKQAAPSPAGRGFESHQVQLFHFPQGKDRPREGARVVWALG
QMNGRARGSSKTAQASVSVQRQFYCLERPQRLHRSS

>gi568815596f:73826911_74058247|GENSCAN_predicted_CDS_5|651_bp
atgcctggaggcggggttgagaaatccaattacttaagcaccaagggcgtaaaagttcca
ggcctcggagggcaacggaaggacttcgcgatgttaacttacttgcctgtcaacacagct
gggctttacttcaaagctctgtttaagccctgcttcctccaggaagccttctctgattat
accagtcttctgccaaccaacggcgcttctaacatttctcatctgacccctggtgatgcc
aatgctgctggtccactgagcagcaaggtggaagtgaggctgtggaacatacaggtgtct
caggactcagccacgggaccagccccaccagctcgctgtgaggctctgcactcagcggtc
agggaaacccagagcacgggctgccagcccaacgccagccacagggacccgagtcctcag
aagcaagcagctcccagcccagctggaagaggctttgaaagccatcaagtacaactcttc
cacttcccccaaggaaaagacaggcccagagagggggcccgagttgtctgggcccttgga
caaatgaatggcagagccagggggagctcgaagacagcgcaggcctccgtctctgtccag
cgccagttctactgcctggagcgacctcagcggctacaccgctcctcctaa

>gi568815596f:73826911_74058247|GENSCAN_predicted_peptide_6|751_aa
MESSEGRRVENSSVEGTEEEKENGGGPVTGRVTETQGGQTGSELSPVDGPVPGQMDSGPV
YHGDSRQLSASGVPVNGAREPAGPSLLGTGGPWRVDQKPDWEAAPGPAHTARLEDAHDLV
AFSAVAEAVSSYGALSTRLYETFNREMSREAGNNSRGPRPGPEGCSAGSEDLDTLQTALA
LARHGMKPPNCNCDGPECPDYLEWLEGKIKSVVMEGGEERPRLPGPLPPGEAGLPAPSTR
PLLSSEVPQISPQEGLPLSQSALSIAKEKNISLQTAIAIEALTQLSSALPQPSHSTPQAS
CPLPEALSPPAPFRSPQSYLRAPSWPVVPPEEHSSFAPDSSAFPPATPRTEFPEAWGTDT
PPATPRSSWPMPRPSPDPMAELEQLLGSASDYIQSVFKRPEALPTKPKVKVEAPSSSPAP
APSPVLQREAPTPSSEPDTHQKAQTALQQHLHHKRSLFLEQVHDTSFPAPSEPSAPGWWP
PPSSPVPRLPDRPPKEKKKKLPTPAGGPVGTEKAAPGIKPSVRKPIQIKKSRPREAQPLF
PPVRQIVLEGLRSPASQEVQAHPPAPLPASQGSAVPLPPEPSLALFAPSPSRDSLLPPTQ
EMRSPSPMTALQPGSTGPLPPADDKLEELIRQFEAEFGDSFGLPGPPSVPIQDPENQQTC
LPAPESPFATRSPKQIKIESSGAVTVLSTTCFHSEEGGQEATPTKAENPLTPTLSGFLES
PLKYLDTPTKSLLDTPAKRAQAEFPTCDCVX

>gi568815596f:73826911_74058247|GENSCAN_predicted_CDS_6|2253_bp
atggagagcagtgagggcaggagagtggagaacagctctgttgaggggacggaggaggaa
aaggagaatggaggaggaccagtaaccggcagggtcacggaaacccagggtgggcagaca
ggctcagagctcagcccagttgatggacctgttccaggtcagatggactcagggccagtg
taccatggggactcacggcagctaagcgcctcaggggtgccggtcaatggtgctagagag
cccgctggacccagtctgctggggactgggggtccttggcgggtagaccaaaagcccgac
tgggaggctgccccaggcccagctcatactgctcgcctggaagatgcccacgatctggtg
gccttttcggctgtggccgaagctgtgtcctcttatggggcccttagcacccggctctat
gaaaccttcaaccgtgagatgagtcgtgaggctgggaacaacagcaggggaccccggcca
gggcctgagggctgctctgctggcagcgaagaccttgacacactgcagacggccctggcc
ctcgcgcggcatggtatgaaaccacccaactgcaactgcgatggcccagaatgccctgac
tacctcgagtggctggaggggaagatcaagtctgtggtcatggaaggaggggaggagcgg
cccaggctcccagggcctctgcctcctggtgaggccggcctcccagcaccaagcaccagg
ccactcctcagctcagaggtgccccagatctctccccaagagggcctgcccctgtcccag
agtgccctgagcattgccaaggaaaaaaacatcagcttgcagaccgccattgccattgag
gccctcacacagctctcctctgccctcccgcagccttctcattccaccccccaggcttct
tgcccccttcctgaggccttgtcacctcctgcccctttcagatctccccagtcttacctc
cgggctccctcatggcctgtggttcctcctgaagagcactcatcttttgctcctgatagc
tctgccttccctccagcaactcctagaactgagttccctgaagcctggggcactgacacc
cctccagcaacgccccggagctcctggcccatgcctcgcccaagccccgatcccatggct
gaactggagcagttgttgggcagcgccagtgattacatccagtcagtattcaagcggcct
gaggccctgcctaccaagcccaaggtcaaggtggaggcaccctcttcctccccggccccg
gccccatcccctgtacttcagagggaggctcccacgccatcctcggagcccgacacccac
cagaaggcccagaccgccctgcagcagcacctccaccacaagcgcagcctcttcctagaa
caggtgcacgacacctccttccctgctccttcagagccttctgctcctggctggtggccc
ccaccaagttcacctgtcccacggcttccagacagaccacccaaggagaagaagaagaag
ctcccaacaccagctggaggtcccgtgggaacggagaaagctgcccctgggatcaagccc
agtgtccgaaagcccattcagatcaagaagtccaggccccgggaagcacagcccctcttc
ccacctgtccgacagattgtcctggaagggcttaggtccccagcctcccaggaagtgcag
gctcatccaccggcccctctgcctgcctcacagggctctgctgtgcccctgcccccagaa
ccttctcttgcgctatttgcacctagtccctccagggacagcctgctgccccctactcag
gaaatgaggtcccccagccccatgacagccttgcagccaggctccactggccctcttccc
cctgccgatgacaagctggaagagctcatccggcagtttgaggctgaatttggagatagc
tttgggcttcccggccccccttctgtgcccattcaggaccccgagaaccagcaaacatgt
ctcccagcccctgagagcccctttgctacccgttcccccaagcaaatcaagattgagtct
tcgggggctgtgactgtgctctcaaccacctgcttccattcagaggagggaggacaggag
gccacacccaccaaggctgagaacccactcacacccaccctcagtggcttcttggagtca
cctcttaagtacctggacacacccaccaagagtctgctggacacacctgccaagagagcc
caggccgagttccccacctgcgattgcgtcgnn