GENSCAN 1.0	Date run:  7-Nov-116	Time: 15:56:34

Sequence gi568815586f:119094850_119295391 : 200542 bp : 44.69% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7387   7533  147  1  0  111   94    56 0.118   7.85
 1.02 Intr +  19429  19515   87  1  0  109   94    85 0.977  10.29
 1.03 Intr +  22088  22159   72  2  0   93   72    80 0.754   5.42
 1.04 Intr +  24856  25062  207  1  0  -35   82   160 0.420   1.29
 1.05 Intr +  25401  25427   27  0  0  142  110    13 0.786   6.13
 1.06 Intr +  30532  30630   99  1  0  111   91    32 0.716   5.03
 1.07 Intr +  35829  35985  157  0  1   98   86    52 0.158   6.01
 1.08 Intr +  50442  50836  395  2  2  133   86   151 0.167  12.85
 1.09 Intr +  56168  56371  204  2  0   84  113    61 0.046   6.52
 1.10 Intr +  58711  58800   90  1  0   90   86    43 0.046   3.41
 1.11 Intr +  59394  59534  141  0  0  106   94   123 0.997  14.17
 1.12 Term +  61646  61949  304  2  1  128   42   239 0.994  17.94
 1.13 PlyA +  63323  63328    6                               1.05

 2.00 Prom +  72565  72604   40                              -4.26
 2.01 Init +  84464  84830  367  1  1  121  119   166 0.970  20.19
 2.02 Intr +  92176  92239   64  2  1  123  100    68 0.835   9.28
 2.03 Term +  98850  99009  160  0  1   76   50   142 0.720   6.61
 2.04 PlyA +  99294  99299    6                              -3.44

 3.00 Prom +  99536  99575   40                              -5.76
 3.01 Init + 100001 100713  713  1  2   97   -2   576 0.469  43.88
 3.02 Intr + 118828 118892   65  1  2   93   96    30 0.061   2.66
 3.03 Intr + 122897 122995   99  0  0   84   93     4 0.062   0.58
 3.04 Intr + 137867 138003  137  0  2   68   85    55 0.289   3.49
 3.05 Term + 138894 138947   54  2  0  117   37    37 0.274  -0.94
 3.06 PlyA + 141510 141515    6                               1.05

 4.00 Prom + 142162 142201   40                              -2.96
 4.01 Init + 157756 157867  112  0  1   71   68    81 0.132   4.86
 4.02 Intr + 170392 170519  128  2  2   87   77    21 0.010   1.30
 4.03 Intr + 172409 172541  133  1  1  115   55    33 0.037   2.92
 4.04 Intr + 191694 191838  145  1  1   55  109   115 0.054   9.64
 4.05 Intr + 196385 196574  190  2  1   75  101    52 0.023   4.79
 4.06 Intr + 199166 199199   34  1  1   83  113     3 0.008   0.10

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  11744  11259  486  2  0   60   39   210 0.930   9.37
S.002 Init +  55881  55928   48  2  0   91   80    30 0.865   3.47
S.003 Intr +  56168  56335  168  1  0   84   86   133 0.940  12.84


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:119094850_119295391|GENSCAN_predicted_peptide_1|643_aa
XTEPQNNPVVPAQDGPSEKLGQHLATEPLGTNSWERDKTCRELGATRGHSASHDKDLTPP
PSSRGKKKKKKSTRKKRRRSSSYSPSPVKKKKKKSSKKHKRRSKSSTCGSWLSHDDDGDD
EDEEEEECTTREREDEMENGGGERQKTLSTFSLSSLIQDRFTDSFGGGLEHRSFSKKRRH
RSRSRPRKSHRHRHHRCPSRSQSSESRPSSCESRHRGRSPEEGQKSRRRHSRRCSKTLCK
DSPEAQSSRPPSQPLQMLGYLSARGVCIMTVNISWLFRNSPWAQRSAVSNGSFCFQITGS
GSAADLFTKTASPLTTSRGRSQEYDSGNDTSSPPSTQTSSARSRGQEKGSPSGGLSKSRE
LNSGNTSDSGNSFTTSSPQNKGAMLENLSPTSRGRESRGFQSPCLECAEVKKSSLVPSTA
RSSPMKGCSRSSSYASTRSSSHSSRSPNPRASPRYTQSRSTSSEKSYSSKSGKRSPPSRS
SRSRRSPSYSRYSPSRERDPKYSEKDSQQRERERARRRRRSYSPMRKRRRDSPSHLEARR
ITSARKRPIPYYRPSPSSSGSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSS
SSSSRSPSPGSRSRSRSRSRSRSRSRSQSRSYSSADSYSSTRR

>gi568815586f:119094850_119295391|GENSCAN_predicted_CDS_1|1932_bp
nngacagagccccagaataaccccgttgtcccagctcaggatggaccctcagaaaagctg
ggtcagcatctggccaccgagcccttgggcaccaacagttgggagagagacaagacctgt
cgggaactgggtgccaccagaggacacagtgcctctcatgacaaagacttgacaccacca
ccttcctccaggggaaagaagaaaaagaagaaatccactcggaagaagagaaggaggtcc
tcatcctatagcccatcgcctgtcaagaaaaagaagaagaaaagttccaagaaacacaag
cgacgcagtaagagttccacatgtggaagctggctgtctcatgatgatgacggtgatgat
gaggatgaggaggaggaggaatgcacaacaagggagagagaagatgagatggagaatgga
ggaggggaaaggcagaagactctctctacgttctccttatccagcctcatccaggacaga
tttactgacagttttgggggaggattggagcaccggtcattctccaagaagagaaggcac
agatctcgaagccggccccgaaagtctcaccgccaccgccatcaccgctgcccctcgcgg
tcccagagctcggagtcccgcccctcaagctgtgagagcaggcaccgcggccggtcccct
gaggaagggcagaagtcccgccgaaggcactcccgccgctgctccaagaccctctgcaag
gacagccctgaggcccagtccagtcgcccgcccagtcaacccctccagatgcttggctac
ctgtcagccaggggtgtatgcatcatgacggtaaacatttcttggttatttagaaacagc
ccatgggcccagcgctcagcagtgtccaacgggtctttttgctttcagatcactgggtcg
gggtctgctgctgacctctttaccaaaacagccagcccgctcaccacctcgcgaggacgt
tcccaggagtacgactcaggaaatgacacgtcctcgccaccctccacgcaaaccagctca
gccaggtctcggggccaggagaaggggagccccagtgggggcttgagcaagagccgggag
ctcaacagtggcaacacctctgattcagggaactccttcaccacctcctcaccccagaac
aagggggccatgttggagaatctctcccccaccagcaggggcagagagtcaaggggattt
cagtcaccgtgtctggaatgtgccgaagtgaagaagtccagtttggtcccatccacagcc
cggagctcacccatgaaagggtgttcccgcagctcctcctatgccagcacccgatcctcc
agtcactcgtcccgatccccaaatcccagggcttcccccaggtacacccaaagccgatcc
acctcttctgaaaaaagctattcctccaagtctggcaagaggagcccgcccagcagaagc
tctaggtcccgccgcagccctagctactcccgctacagccccagcagggagcgggatccc
aaatacagtgagaaggactcgcagcagcgggagcgcgagcgagcgcgtcggagacgtcgg
tcctactcgcctatgagaaagcgccggagagactccccgagccacctggaggcccggagg
ataaccagtgcccggaaacgccccatcccctactatcggcccagcccctcctcatccggc
agcctcagcagcacctcctcctggtacagcagcagcagtagccgctcggccagccgcagc
tactcccggagccggagtcggagccggagccggagacggagccggacccgcacgagcagc
agctctagctcccgcagccctagtccgggctcccgcagccggagccggagcaggagccgg
agccggagccggagcaggagccagagccggagctacagctcagcagacagctactccagc
acgaggcgctaa

>gi568815586f:119094850_119295391|GENSCAN_predicted_peptide_2|196_aa
MADGQMPFSCHYPSRLRRDPFRDSPLSSRLLDDGFGMDPFPDDLTASWPDWALPRLSSAW
PGTLRSGMVPRGPTATARFGVPAEGRTPPPFPGEPWKVCVNVHSFKPEELMVKTKDGYVE
VSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLSPEGLLIIEAPQVPPYSTFGES
SFNNELPQDSQEVTCT

>gi568815586f:119094850_119295391|GENSCAN_predicted_CDS_2|591_bp
atggctgacggtcagatgcccttctcctgccactacccaagccgcctgcgccgagacccc
ttccgggactctcccctctcctctcgcctgctggatgatggctttggcatggaccccttc
ccagacgacttgacagcctcttggcccgactgggctctgcctcgtctctcctccgcctgg
ccaggcaccctaaggtcgggcatggtgccccggggccccactgccaccgccaggtttggg
gtgcctgccgagggcaggacccccccacccttccctggggagccctggaaagtgtgtgtg
aatgtgcacagcttcaagccagaggagttgatggtgaagaccaaagatggatacgtggag
gtgtctggcaaacatgaagagaaacagcaagaaggtggcattgtttctaagaacttcaca
aagaaaatccagcttcctgcagaggtggatcctgtgacagtatttgcctcactttcccca
gagggtctgctgatcatcgaagctccccaggtccctccttactcaacatttggagagagc
agtttcaacaacgagcttccccaggacagccaggaagtcacctgtacctga

>gi568815586f:119094850_119295391|GENSCAN_predicted_peptide_3|355_aa
MPKGGRKGGHKGWARQYRSPEEIDVQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS
DESEDEEDDYQQNRKGVEGLFNIENPNQVAQTTKKVTQLYLDGPKELSRREREEIEKQKA
KERYMKMHLAGKTEQAKADLARWPSSGNSGRRLPGRRKRKGKQKMMPHCQENECSRSPCI
SNRDPWEEMPGTWAALPGPLLCLAHPVPWRRRNSPSWPGAPHGLGPPLHFGTEIVWGMEH
NTTGSKLKQTRDEGTSKQAAISSYTRGSQDRLHNHQCTCHWIIHTYFPPLPDSHPHGFHV
VLALSHFMSVITYQGTALLNVGSASNAYISSTTNRHSHNFEFELFYLWLLCRGKE

>gi568815586f:119094850_119295391|GENSCAN_predicted_CDS_3|1068_bp
atgcctaaaggagggagaaagggaggccacaaaggctgggcgaggcagtataggagccct
gaggagatcgacgtacagctgcaggctgagaagcagaaggccagggaagaagaggagcaa
aaagaaggtggagatggggctgcaggtgaccccaaaaaggagaagaaatctctagactca
gatgagagtgaggatgaagaagatgactaccagcaaaaccgcaaaggcgttgaagggctc
ttcaacatcgagaaccccaaccaggtggcacagacaaccaaaaaggtcacacaactgtat
ctggatgggccaaaggagctttcgaggagagaacgagaagagattgagaagcagaaggca
aaagagcgttacatgaaaatgcacttggccgggaagacagagcaagccaaggctgacctg
gcccgctggccatcatccggaaacagcgggaggaggctgcccggaagaaggaagaggaaa
ggaaagcaaaagatgatgccacattgtcaggaaaacgaatgcagtcgctctccctgtata
agtaaccgcgacccatgggaggagatgccggggacctgggccgcgctgccaggacctctg
ctgtgtctcgcccaccctgtgccctggcgccgccgcaacagcccctcgtggccaggagcc
ccccatggcctggggcctcctcttcattttggcacagaaattgtttgggggatggaacat
aatacaactggatctaagcttaagcaaacacgtgatgagggaacaagtaaacaggcagct
atctcctcttatacccggggctcccaagacagactgcataaccatcaatgcacctgtcac
tggatcatccacacctacttccctcccttaccagactctcatcctcatgggttccatgtt
gttcttgctctctcccatttcatgtccgtaatcacttaccaaggcacagccctgctgaat
gtaggttcagcatccaatgcttacataagcagcaccaccaaccggcacagtcacaacttt
gagtttgaactgttctacctctggcttctttgtcgtggaaaagaataa

>gi568815586f:119094850_119295391|GENSCAN_predicted_peptide_4|248_aa
MDIAVITVSSVVTVSSLQVTSLVEDMDPEEENRTAGCLIIIASKPQRDTISCQSEWLASK
TKKITDVDEVAEKREGLYLLVRMLCIPAAPAPAVAKRSQGTAQAIASEGASPKSWQLSCG
VGPAGITSKVMGDAENFTHGQRKLQLIKALPMDSGENSEGAFSHSTESRLFTRSAAALDS
HRSTNPIVNCTCEGSRLHAPYENLVPDDLSPSPITPRSDCLVVGKQTQGSHGLCIMDLTQ
GLGNTTEX

>gi568815586f:119094850_119295391|GENSCAN_predicted_CDS_4|744_bp
atggacattgctgttatcacagtgagctcagtggtgacagtgtcatcactccaagtgact
tcactggttgaagacatggatccagaagaggagaacaggacagccggatgcttgataata
attgcctcaaaaccacaacgagataccatctcatgccagtcagaatggctagcatcaaaa
actaaaaaaataacagatgttgatgaggttgcagagaaaagagaaggcttatacctgttg
gtcaggatgctctgcatcccagctgctccagctccagctgtggctaaaaggagccaaggt
acagctcaggccattgcttcagagggtgcaagccccaagtcttggcagctttcatgtggt
gttgggcctgcaggaatcaccagcaaagtgatgggggatgctgaaaattttacccacggg
cagaggaagcttcaactcatcaaagccttgccaatggacagtggagaaaacagtgagggt
gccttctcacactcaacagagtcccgcttattcaccagatcagccgcagcattagattct
catagaagcacaaaccctattgtgaactgcacatgcgagggatctaggttgcatgctcct
tatgagaatctagtgccggatgatctgtcaccatctcccatcacccccagatcagactgt
ctagttgtaggaaaacaaactcagggctcccacggactctgcattatggacctaacccaa
ggcctgggtaatacaacagaagnn