GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:00:53

Sequence gi568815581r:48860884_49067232 : 206349 bp : 47.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1393   1421   29  2  2  121  131    -8 0.931   4.63
 1.02 Term +   1955   2122  168  1  0  114   48   115 0.980   7.98
 1.03 PlyA +   2934   2939    6                               1.05

 2.00 Prom +   4655   4694   40                              -5.16
 2.01 Init +  10668  10680   13  2  1  110   95     8 0.824   3.40
 2.02 Intr +  20237  20437  201  0  0  114   72   167 0.981  16.96
 2.03 Intr +  20816  20882   67  0  1   92   68    44 0.393   0.76
 2.04 Intr +  22463  22616  154  2  1   43  117    41 0.303   2.57
 2.05 Intr +  31747  31914  168  0  0  -13   31   187 0.116   3.04
 2.06 Intr +  32526  32573   48  2  0  103   95    -8 0.417   0.28
 2.07 Intr +  34273  34451  179  0  2  100  111   230 0.983  25.22
 2.08 Term +  34772  34886  115  2  1  116   54   138 0.812  11.24
 2.09 PlyA +  39204  39209    6                               1.05

 3.00 Prom +  40928  40967   40                              -5.46
 3.01 Init +  47621  47937  317  1  2  108   89   288 0.999  25.71
 3.02 Intr +  49925  49997   73  2  1   90   95    69 0.998   7.21
 3.03 Intr +  51951  52138  188  2  2   71   90   180 0.999  14.99
 3.04 Intr +  55193  55304  112  2  1   89  110    89 0.999  11.58
 3.05 Intr +  60277  60389  113  0  2   38   92    53 0.969  -0.12
 3.06 Intr +  61964  62054   91  2  1   97   90   138 0.952  14.90
 3.07 Term +  66081  66251  171  2  0  116   41   119 0.958   7.83
 3.08 PlyA +  68152  68157    6                               1.05

 4.15 PlyA -  69235  69230    6                               1.05
 4.14 Term -  69729  69592  138  0  0  152   42    69 0.999   6.66
 4.13 Intr -  70834  70760   75  1  0  106   72   110 0.983  10.91
 4.12 Intr -  72463  72322  142  0  1   47   69   222 0.692  16.56
 4.11 Intr -  75359  75287   73  0  1  114   39    19 0.853  -1.94
 4.10 Intr -  76241  76137  105  0  0   87   78   104 0.974   9.49
 4.09 Intr -  80179  80041  139  1  1  105   58   239 0.892  22.64
 4.08 Intr -  81674  81585   90  2  0   72   42   119 0.976   5.89
 4.07 Intr -  83092  83042   51  1  0  123  111    33 0.996   8.20
 4.06 Intr -  83955  83798  158  1  2   46   83    82 0.056   3.23
 4.05 Intr -  93528  93506   23  2  2   94   90    27 0.074   0.69
 4.04 Intr - 100104 100003  102  2  0   51   91   115 0.864   7.39
 4.03 Intr - 100936 100844   93  0  0   92  105    79 0.998   9.08
 4.02 Intr - 103597 103427  171  0  0  102   61   167 0.998  14.46
 4.01 Init - 106349 106264   86  2  2   73   91   196 0.999  16.69
 4.00 Prom - 109339 109300   40                              -5.46

 5.00 Prom + 119337 119376   40                              -3.46
 5.01 Init + 136863 137037  175  2  1  110  111   465 0.970  50.51
 5.02 Intr + 138226 138286   61  2  1   94   97    65 0.789   5.79
 5.03 Intr + 164735 164783   49  2  1  109  100    44 0.967   6.38
 5.04 Intr + 165583 165634   52  0  1   94  116    54 0.992   7.28
 5.05 Intr + 171027 171090   64  1  1  116   73    96 0.896   8.68
 5.06 Intr + 177285 177566  282  0  0   83   89   388 0.896  34.93
 5.07 Intr + 179074 179208  135  1  0   97  111   112 0.999  14.08
 5.08 Intr + 180495 180617  123  0  0   81   71   102 0.994   7.50
 5.09 Intr + 181359 181494  136  0  1   64   75   171 0.999  13.97
 5.10 Intr + 182545 182667  123  0  0  134   78    16 0.954   5.98
 5.11 Intr + 183084 183203  120  2  0   74   53   200 0.637  15.79
 5.12 Intr + 185007 185138  132  2  0   94  101   179 0.864  20.64
 5.13 Intr + 185377 185490  114  0  0  106   88   212 0.998  23.64
 5.14 Intr + 187680 187811  132  2  0   46   83    74 0.861   3.54
 5.15 Term + 188469 188561   93  2  0  106   47    95 0.888   5.03
 5.16 PlyA + 188881 188886    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  83851  83798   54  1  0   62   83    79 0.929   6.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:48860884_49067232|GENSCAN_predicted_peptide_1|65_aa
XIQESSSPSPLSIKKCPICKADDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHV
FCHSL

>gi568815581r:48860884_49067232|GENSCAN_predicted_CDS_1|198_bp
ngtatccaagaaagttcttcccccagcccgctctccatcaagaaatgccctatctgcaaa
gcagatgatatttgtgatcacaccttggagcaacagcagatgcagcccctttgtttcaat
tgtccaatttgtgacaagatcttcccagctacagagaagcagatctttgaagaccacgtg
ttctgccactctctctga

>gi568815581r:48860884_49067232|GENSCAN_predicted_peptide_2|314_aa
MPGLDRDAGTQHRTWAHFIQIMKVEETAASKCNWPAVTQLHDSKVEFLLPHWVLCGQQQA
TCHHQEARHLTGILSSPSTGCETLRKSLNDALAGLCSSEPSLRYMTLTNQSVARKRNGQH
SLQALPLCELLTHRTSQRRNTGPKPESPASIRMEAGIATKLLWRERKQLRKANKSGESMT
STNGDAGILRPMRMEKVQDTWTEKMQTAGALFISPALPSYSNFPLQVARREFQTSVVSRD
IDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMG
LFCLMVAFLILFAM

>gi568815581r:48860884_49067232|GENSCAN_predicted_CDS_2|945_bp
atgcctggcctagaccgagacgcgggcacccagcaccgcacctgggcccacttcatccag
atcatgaaggtggaggagactgcagccagcaagtgcaactggccagcagtcacacagctc
catgactccaaggttgagttcctgctgcctcactgggtcctctgtggccagcaacaagcc
acgtgtcaccaccaagaggcccgacatcttacaggaatcctgtcttcaccatcaactggc
tgcgagaccttgagaaagtcacttaatgatgcactggctgggctatgctctagtgaaccc
agcctaagatacatgacgcttactaaccagtcagtagcaaggaaacggaatggccagcac
tcgcttcaggctctgcctctgtgtgagttgctgacacacagaacatcgcagaggaggaac
accgggcccaaaccggaaagccccgcctctatccgcatggaggcgggaattgccacgaag
ctcctgtggagggagaggaagcagctgcggaaagccaataagagtggggaatcgatgacg
tcaaccaatggggacgcggggatattacggccaatgagaatggagaaggtccaggacacg
tggactgaaaaaatgcagaccgccggggcattattcatttctccagctctgccttcctac
agcaacttcccactccaggtggccagacgggagttccagaccagtgttgtctcccgggac
attgacacagcagccaagtttattggtgctggggcagccacagttggtgtggctggttca
ggggctggcattggaaccgtgtttggcagcttgatcattggctatgccaggaacccgtct
ctcaagcagcagctcttctcctatgccattcttggctttgccctgtctgaggccatgggg
cttttctgtttgatggtcgccttcctcatcctcttcgccatgtga

>gi568815581r:48860884_49067232|GENSCAN_predicted_peptide_3|354_aa
MAESPTEEAATAGAGAAGPGASSVAGVVGVSGSGGGFGPPFLPDVWAAAAAAGGAGGPGS
GLAPLPGLPPSAAAHGAALLSHWDPTLSSDWDGERTAPQCLLRIKRDIMSIYKEPPPGMF
VVPDTVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPN
FYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERHPGDSKNY
NECIRHETIRVAVCDMMEGKCPCPEPLRGVMEKSFLEYYDFYEVACKDRLHLQGQTMQDP
FGEKRGHFDYQSLLMRLGLIRQKVLERLHNENAEMDSDSSSSGTETDLHGSLRV

>gi568815581r:48860884_49067232|GENSCAN_predicted_CDS_3|1065_bp
atggcggagagtccgactgaggaggcggcaacggcgggcgccggggcggcgggccccggg
gcgagcagcgttgctggtgttgttggcgttagcggcagcggcggcgggttcgggccgcct
ttcctgccggatgtgtgggcggcggcggcggcagcgggcggggccgggggcccggggagc
ggcctggctccgctgcccgggctcccgccctcagccgctgcccacggggccgcgctgctt
agccactgggaccccacgctcagctccgactgggacggcgagcgcaccgcgccgcagtgt
ctactccggatcaagcgggatatcatgtccatttataaggagcctcctccaggaatgttc
gttgtacctgatactgttgacatgactaagattcatgcattgatcacaggcccatttgac
actccttatgaagggggtttcttcctgttcgtgtttcggtgtccgcccgactatcccatc
cacccacctcgggtcaaactgatgacaacgggcaataacacagtgaggtttaaccccaac
ttctaccgcaatgggaaagtctgcttgagtattctaggtacatggactggacctgcctgg
agcccagcccagagcatctcctcagtgctcatctctatccagtccctgatgactgagaac
ccctatcacaatgagcccggctttgaacaggagagacatccaggagacagcaaaaactat
aatgaatgtatccggcacgagaccatcagagttgcagtctgtgacatgatggaaggaaag
tgtccctgtcctgaacccctacgaggggtgatggagaagtcctttctggagtattacgac
ttctacgaggtggcctgcaaagatcgcctgcaccttcaaggccaaactatgcaggaccct
tttggagagaagcggggccactttgactaccagtccctcttgatgcgcctgggactgata
cgtcagaaagtgctggagaggctccataatgagaatgcagaaatggactctgatagcagt
tcatctgggacagagacagaccttcatgggagcctgagggtttag

>gi568815581r:48860884_49067232|GENSCAN_predicted_peptide_4|481_aa
MVATKTFALLLLSLFLAVGLGEKKEGHFSALPSLPVGSHAKVSSPQPRGPRYAEGTFISD
YSIAMDKIHQQDFVNWLLAQKGKKNDWKHNITQREARALELASQANRKEEEAVEPQSSPA
KNPSDEDLLRDLLIQELLACLLDQTNLCRLRLRNRRERDDARLGLPPWGAGGGVRDVETR
GPGSRAARGPRVGMHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQPFPSLYVLRVYP
VIVIGEEVEEAVKQENGAMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGV
DPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQ
DVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSE
IKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFTDLYSQEITAEEAREAL
P

>gi568815581r:48860884_49067232|GENSCAN_predicted_CDS_4|1446_bp
atggtggccacgaagacctttgctctgctgctgctgtccctgttcctggcagtgggacta
ggagagaagaaagagggtcacttcagcgctctcccctccctgcctgttggatctcatgct
aaggtgagcagccctcaacctcgaggccccaggtacgcggaagggactttcatcagtgac
tacagtattgccatggacaagattcaccaacaagactttgtgaactggctgctggcccaa
aaggggaagaagaatgactggaaacacaacatcacccagagggaggctcgggcgctggag
ctggccagtcaagctaataggaaggaggaggaggcagtggagccacagagctccccagcc
aagaaccccagcgatgaagatttgctgcgggacttgctgattcaagagctgttggcctgc
ttgctggatcagacaaacctctgcaggctcaggctgaggaaccgtcgtgaaagagatgac
gcgcggctcgggcttccgccttggggagccggcggcggagtccgggacgtggagacccgg
ggtcccggcagccgggcggcccgcgggcccagggtggggatgcaccgccgcggggtggga
gctggcgccatcgccaagaagaaacttgcagaggccaagtataaggagcgagggacggtc
ttggctgaggaccagctagcccagcccttcccttctctgtacgtgctccgagtttaccca
gtgattgtgattggggaagaagtggaggaagccgttaagcaggaaaatggggctatgtca
aagcagttggacatgttcaagaccaacctggaggaatttgccagcaaacacaagcaggag
atccggaagaatcctgagttccgtgtgcagttccaggacatgtgtgcaaccattggcgtg
gatccgctggcctctggaaaaggattttggtctgagatgctgggcgtgggggacttctat
tacgaactaggtgtccaaattatcgaagtgtgcctggcgctgaagcatcggaatggaggt
ctgataactttggaggaactacatcaacaggtgttgaagggaaggggcaagttcgcccag
gatgtcagtcaagatgacctgatcagagccatcaagaaactaaaggcacttggcactggc
ttcggcatcatccctgtgggcggcacttacctcattcagtctgttccagctgagctcaat
atggatcacaccgtggtgctgcagctggcagagaagaatggctacgtgactgtcagtgag
atcaaagccagtcttaaatgggagaccgagcgagcgcggcaagtgctggaacacctgctg
aaggaagggttggcgtggctggacttacaggccccaggggaggcccactactggctgcca
gctctcttcactgacctctactcccaggagattacagctgaggaggccagagaagccctc
ccctga

>gi568815581r:48860884_49067232|GENSCAN_predicted_peptide_5|596_aa
MNKLYIGNLNESVTPADLEKVFAEHKISYSGQFLVKSGYAFVDCPDEHWAMKAIETFSGK
VELQGKRLEIEHSVPKKQRSRKIQIRNIPPQLRWEVLDSLLAQYGTVENCEQVNTESETA
VVNVTYSNREQTRQAIMKLNGHQLENHALKVSYIPDEQIAQGPENGRRGGFGSRGQPRQG
SPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA
EKAISVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLK
KVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAMSL
QSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAI
IGKKGQHIKQLSRFASASIKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGK
GGKTVNELQNLTAAEVVVPRDQTPDENDQVIVKIIGHFYASQTYYSFSWGIKMKRGFVMM
SSKLRPSTTGVPKPRATDWYRATQQEMAQRKIRDILAQVKQQHQKGQSNQAQARRK

>gi568815581r:48860884_49067232|GENSCAN_predicted_CDS_5|1791_bp
atgaacaagctttacatcggcaacctcaacgagagcgtgacccccgcggacttggagaaa
gtgtttgcggagcacaagatctcctacagcggccagttcttggtcaaatccggctacgcc
ttcgtggactgcccggacgagcactgggcgatgaaggccatcgaaactttctccgggaaa
gtagaattacaaggaaaacgcttagagattgaacattcggtgcccaaaaaacaaaggagc
cggaaaattcaaatccgaaatattccaccccagctccgatgggaagtactggacagcctg
ctggctcagtatggtacagtagagaactgtgagcaagtgaacaccgagagtgagacggca
gtggtgaatgtcacctattccaaccgggagcagaccaggcaagccatcatgaagctgaat
ggccaccagttggagaaccatgccctgaaggtctcctacatccccgatgagcagatagca
cagggacctgagaatgggcgccgagggggctttggctctcggggtcagccccgccagggc
tcacctgtggcagcgggggccccagccaagcagcagcaagtggacatcccccttcggctc
ctggtgcccacccagtatgtgggtgccattattggcaaggagggggccaccatccgcaac
atcacaaaacagacccagtccaagatagacgtgcataggaaggagaacgcaggtgcagct
gaaaaagccatcagtgtgcactccacccctgagggctgctcctccgcttgtaagatgatc
ttggagattatgcataaagaggctaaggacaccaaaacggctgacgaggttcccctgaag
atcctggcccataataactttgtagggcgtctcattggcaaggaaggacggaacctgaag
aaggtagagcaagataccgagacaaaaatcaccatctcctcgttgcaagaccttaccctt
tacaaccctgagaggaccatcactgtgaagggggccatcgagaattgttgcagggccgag
caggaaataatgaagaaagttcgggaggcctatgagaatgatgtggctgccatgagcctg
cagtctcacctgatccctggcctgaacctggctgctgtaggtcttttcccagcttcatcc
agcgcagtcccgccgcctcccagcagcgttactggggctgctccctatagctcctttatg
caggctcccgagcaggagatggtgcaggtgtttatccccgcccaggcagtgggcgccatc
atcggcaagaaggggcagcacatcaaacagctctcccggtttgccagcgcctccatcaag
gctcagggaagaatctatggcaaactcaaggaggagaacttctttggtcccaaggaggaa
gtgaagctggagacccacatacgtgtgccagcatcagcagctggccgggtcattggcaaa
ggtggaaaaacggtgaacgagttgcagaatttgacggcagctgaggtggtagtaccaaga
gaccagacccctgatgagaacgaccaggtcatcgtgaaaatcatcggacatttctatgcc
agtcagacatattattccttttcctggggtattaaaatgaagcgtggatttgtgatgatg
tcttctaagttacgaccctctacaacaggagtccccaaaccccgggccacggactggtac
cgggccacacagcaggagatggctcaacggaagatccgagacatcctggcccaggttaag
cagcagcatcagaagggacagagtaaccaggcccaggcacggaggaagtga