GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:54:36

Sequence gi568815580f:11751512_11952108 : 200597 bp : 44.71% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    923   1067  145  1  1   96   82   207 0.985  21.18
 1.02 Intr +   1342   1414   73  2  1   98   54    75 0.999   3.56
 1.03 Intr +   2117   2171   55  2  1   81   79   103 0.999   7.68
 1.04 Intr +   2315   2434  120  1  0   80  110   105 0.966  12.59
 1.05 Term +  21391  21438   48  0  0   69   43   104 0.058   1.30
 1.06 PlyA +  22114  22119    6                               1.05

 2.07 PlyA -  24370  24365    6                               1.05
 2.06 Term -  32879  32629  251  0  2   57   37   170 0.653   4.67
 2.05 Intr -  53985  52423 1563  1  0  -37  -36   637 0.089  27.94
 2.04 Intr -  55159  55029  131  0  2   72   43    92 0.628   3.44
 2.03 Intr -  59678  59564  115  0  1   -7  115   116 0.554   4.31
 2.02 Intr -  64605  64583   23  2  2   71  115   -10 0.036  -2.81
 2.01 Init -  70443  70334  110  0  2  113   85    47 0.107   4.70
 2.00 Prom -  80439  80400   40                              -4.26

 3.00 Prom +  94555  94594   40                              -5.56
 3.01 Init +  96391  96492  102  0  0   46   71    84 0.755   2.74
 3.02 Term +  99833 100600  768  1  0  110   49   836 0.879  75.31
 3.03 PlyA + 101165 101170    6                               1.05

 4.00 Prom + 104549 104588   40                              -6.86
 4.01 Init + 104807 104947  141  1  0   46  103    42 0.341   1.67
 4.02 Intr + 110834 110938  105  1  0   60   91    62 0.367   4.11
 4.03 Intr + 111130 111316  187  0  1   62   64    55 0.233  -0.24
 4.04 Intr + 117032 117152  121  0  1   71   61    71 0.010   2.25
 4.05 Intr + 120757 120887  131  1  2  116  107    88 0.999  13.84
 4.06 Intr + 125110 125177   68  2  2   77   99    82 0.913   6.82
 4.07 Term + 129478 129624  147  0  0   63   55   408 0.676  32.90
 4.08 PlyA + 130496 130501    6                              -0.45

 5.07 PlyA - 131993 131988    6                               1.05
 5.06 Term - 133116 132934  183  0  0  127   49    59 0.810   3.44
 5.05 Intr - 134287 134165  123  1  0   44   52    97 0.638   2.48
 5.04 Intr - 135110 134988  123  2  0   69   47    79 0.771   2.68
 5.03 Intr - 135514 135406  109  0  1  109   75   195 0.868  20.59
 5.02 Intr - 137979 137876  104  0  2  113   80    73 0.996   7.97
 5.01 Init - 142055 141957   99  2  0   50   75   148 0.698   8.33
 5.00 Prom - 147916 147877   40                              -3.96

 6.00 Prom + 148058 148097   40                              -3.56
 6.01 Init + 159358 159564  207  0  0   19   55   118 0.198   0.42
 6.02 Intr + 166302 166397   96  2  0   94   80    66 0.856   6.61
 6.03 Intr + 175850 175931   82  1  1    5  115    68 0.015   0.41
 6.04 Intr + 192888 192981   94  1  1   50   77    89 0.345   3.02
 6.05 Term + 196442 196607  166  2  1   90   49    61 0.277  -0.21
 6.06 PlyA + 197141 197146    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +   3706   3744   39  0  0  106   38    20 0.819  -4.01
S.002 Init -  32930  32915   16  2  1   92  116    -1 0.927   3.64
S.003 Init + 117076 117152   77  0  2   83   61    91 0.984   6.46


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580f:11751512_11952108|GENSCAN_predicted_peptide_1|146_aa
MGCLGGNSKTTEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVK
QMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKS
IAPITDFEYSQSLTSLSCEDSIAIEW

>gi568815580f:11751512_11952108|GENSCAN_predicted_CDS_1|441_bp
atggggtgtttgggcggcaacagcaagacgacggaagaccagggcgtcgatgaaaaagaa
cgacgcgaggccaacaaaaagatcgagaagcagttgcagaaagagcgcctggcttacaag
gctacccaccgcctgctgctcctgggggctggtgagtctgggaaaagcactatcgtcaaa
cagatgaggatcctgcacgtcaatgggtttaatcccgaggaaaagaaacagaaaattctg
gacatccggaaaaatgttaaagatgctatcgtgacaattgtttcagcaatgagtactata
atacctccagttccgctggccaaccctgaaaaccaatttcgatcagactacatcaagagc
atagcccctatcactgactttgaatattcccagtcccttacatccctgtcctgcgaagac
agcattgccatcgagtggtag

>gi568815580f:11751512_11952108|GENSCAN_predicted_peptide_2|730_aa
MAWARSGHRATLDAGLASPEGGCALQGGGRPLCFSPWMGIAGFYGGSFGGFGCKEGTQEC
GVVAFGKCGKARISMVGQGSNTCLPQQEDVYVNIKVEGQLMGRNAGHTVSFFLRILFPLI
LTVPERDDEKLLNGYNVHYLGDGYTKNSDFTTTQYLHVPPKLHLYFTSTEYLHVPSKLHV
YLTTTQYLHVPFKLHLYFTTTQYLHVPLKLHLYFTTTQYLHVPLKLHLYFTTTQYLHVPL
KLHLYFTTTQYLHVPLKLHLYFTTQYLHVPLKLHLYFTTTQYLHVPFKLHLYFTTTQYLH
VPLKLHLYFTTTQYLRVPPKLHLYCTTTQYLRVPPKLHLYFTTTQYLRVPLKLHLYFTTT
QYLRVPLKLHLYFTTTQYLRVPLKPLLYFTTTQYLRVPSKPHLYFTTTQYLRVPSKPHLY
FTTTQYLRVPSKPHLYFTTTQYLRVPSKPHLYFTTTQYLRVPSKPHLYFTTTQYLRVPSK
PHLYFTTTQYLRVPSKPHLYFTTTQYLRVPSKPHLYFTTTQYLRVPSKPHLYFTTTQYLR
VPSKPHLYFTTTQYLRVPSKPHLYFTTTQYLRVPSKLHLYFTTTQYLRVPLKLLLYFTTT
QYLRVPNFTCTSPLHSISVFHSNCSCTSPLHSISVFHPNCTCTSPLHKNTVGCRNTCGHV
VGFIPHAEAMVDDKGDLEAVRLGVRPIRADTSPADLKTETQCSEVSRRATGSCQHWETKD
KYAGPHHEEA

>gi568815580f:11751512_11952108|GENSCAN_predicted_CDS_2|2193_bp
atggcctgggcgcgttctggccaccgggccacactggatgccggcctggcctcgccagag
ggcggatgtgcgctgcagggaggcgggaggcccttgtgcttcagcccttggatgggaatt
gcagggttttatggaggctcctttggcggctttgggtgcaaggaaggcacccaggaatgt
ggcgttgtggcttttgggaaatgtggcaaggcccggatttcaatggtggggcaggggagc
aacacatgcctccctcaacaggaggacgtctatgtgaatatcaaagtggaaggacagtta
atgggccgcaatgctgggcacacagtttctttcttccttcgaattctttttcctctaata
ctcactgttcctgagagggatgatgaaaaattacttaatgggtacaacgtacattatttg
ggtgatggatatactaaaaactcagacttcaccactacacaatatctccatgttccaccc
aagctgcacctgtactttaccagtacagaatacctccatgttccatccaaattgcacgtg
tacctcaccactacacagtatctccatgttccattcaaattgcacctgtacttcaccact
acacaatatctccatgttccactcaaactgcacctgtacttcaccactacacagtatctc
catgttccactcaaattgcacctgtacttcaccactacacagtatctccatgttccactc
aaattgcacctgtacttcaccactacacaatatctccatgttccactcaaattgcacctg
tacttcactacacagtatctccatgttccactcaaattgcacctgtacttcaccactaca
cagtatctccatgttccattcaaactgcatctgtacttcaccactacacagtatctccat
gttccactcaaactgcacctgtacttcaccactacacagtatctccgtgttccacccaaa
ctgcacctgtactgcaccactacacagtatctccgtgttccacccaaactgcacctgtac
ttcaccactacacagtatctccgtgttccactcaaactgcacctgtacttcaccactaca
cagtatctccgtgttccactcaaactgcacctgtacttcaccactacacagtatctccgt
gtcccactcaaaccgctcctgtacttcaccactacacagtatctccgtgttccatccaaa
ccgcacctgtacttcaccactacacagtatctccgtgttccatccaaaccgcacctgtac
ttcaccactacacagtatctccgtgttccatccaaaccgcacctgtacttcaccactaca
cagtatctccgtgttccatccaaaccgcacctgtacttcaccactacacagtatctccgt
gttccatccaaaccgcacctgtacttcaccactacacagtatctccgtgttccatccaaa
ccgcacctgtacttcaccactacacagtatctccgtgttccatccaaaccgcacctgtac
ttcaccactacacagtatctccgtgttccatccaaaccgcacctgtacttcaccactaca
cagtatctccgtgttccatccaaaccgcacctgtacttcaccactacacagtatctccgt
gttccatccaaaccgcacctgtacttcaccactacacagtatctccgtgttccatccaaa
ccgcacctgtacttcaccactacacagtatctccgtgttccatccaaactgcacctgtac
ttcaccactacacagtatctccgtgttccactcaaactgctcctgtacttcaccactaca
cagtatctccgtgttccaaacttcacctgtacttcaccactacacagtatctccgtgttc
cactcaaactgctcctgtacttcaccactacacagtatctccgtgttccatccaaactgc
acctgtacttcaccactacataagaacacagttggctgccgcaacacctgtggccacgtg
gttggtttcattccccatgctgaggccatggtggatgacaagggagacttagaagcagtc
agattaggggtaaggcccattagggcggacacctcgcctgctgacctgaagacagaaaca
caatgcagtgaagtctccagaagagcaacaggctcttgtcagcactgggagaccaaagac
aagtacgctggtccccaccatgaggaagcatag

>gi568815580f:11751512_11952108|GENSCAN_predicted_peptide_3|289_aa
MEYKEWKKLRARVDADSDTTVVRDNSSKSNSNDKAPPLALGSDVTTCAAHSRNRKWDQNK
GAAAGSGLTLPSLPSARFSAGPPTQRSRPTMSNMEKHLFNLKFAAKELSRSAKKCDKEEK
AEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAVAARVQTAVTMGKVTK
SMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVD
MLLQEMADEAGLDLNMELPQGQTGSVGTSVASAEQDELSQRLARLRDQV

>gi568815580f:11751512_11952108|GENSCAN_predicted_CDS_3|870_bp
atggaatataaagaatggaaaaaacttagagccagggtagatgcagattcagataccacg
gtggtcagagataattcttccaaatccaactcgaatgacaaggctccgcctttggcgctg
ggctctgacgtcaccacctgcgccgctcacagtagaaacaggaagtgggaccaaaacaaa
ggagcggcggccgggagcggacttaccttaccttctctgccttcggcgcgcttctcagcc
gggccgccgacccaaaggagccgtccgactatgtctaacatggagaaacacctgttcaac
ctgaagttcgcggccaaagaactgagtaggagtgccaaaaaatgcgataaggaggaaaag
gccgaaaaggccaaaattaaaaaggccattcagaagggcaacatggaagttgcgaggata
cacgccgaaaatgccatccgccagaagaaccaggcggtgaatttcttgagaatgagtgcg
cgagtcgatgcagtggctgccagggtccagacggcggtgacgatgggcaaggtgaccaag
tcgatggctggtgtggttaagtcgatggatgcgacattgaagaccatgaatctggagaag
atttctgctttgatggacaaattcgagcaccagtttgagactctggacgtccagacgcag
caaatggaagacacgatgagcagcacgacgacgctcaccactccccagaaccaagtggat
atgctgctccaggaaatggcagatgaggcgggcctcgacctcaacatggagctgccgcag
ggccagaccggctccgtgggcacgagcgtggcttcggcggagcaggatgaactgtctcag
agactggcccgccttcgggatcaagtgtga

>gi568815580f:11751512_11952108|GENSCAN_predicted_peptide_4|299_aa
MSVIVSVSGPGVVPPTVGSLHCIANVCLAWVVTPDSASSFLMTADRQGKVGREQASTLAG
FLCSFLERIDSVSLVDYTPTDQHLVIIKIASMQMSLSADKEYAVPFPPGAVLRKAKSLLP
GFINYAHSVCGPGPGGSHITVNFPDVTAIIYVAACSSYNMVIREDNNTNRLRESLDLFES
IWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATPDAGEDPKVT
RAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL

>gi568815580f:11751512_11952108|GENSCAN_predicted_CDS_4|900_bp
atgtctgtcatagtgtcagtctctgggcctggtgtggtgcctcccacagtgggctccttg
cactgcatagcaaacgtgtgcctggcctgggtggtcactcctgatagtgcctcgagcttt
ctgatgacagcagacaggcaggggaaagtgggcagagaacaggcctcaacccttgctggc
tttctttgcagcttcctggaaagaatcgacagcgtcagcttggttgactacacacccaca
gaccagcacttagtgattatcaaaattgccagcatgcaaatgagtttatctgcagataag
gaatatgccgttccttttcctcctggagctgtcctcaggaaagcgaagtctttacttcct
ggcttcataaactatgcccattctgtttgtggccctgggcctggggggtcccatatcaca
gtgaactttccagatgtcacagctatcatttacgtcgcagcctgcagtagctacaacatg
gtgattcgagaagataacaacaccaacaggctgagagagtccctggatctttttgaaagc
atctggaacaacaggtggttacggaccatttctatcatcttgttcttgaacaaacaagat
atgctggcagaaaaagtcttggcagggaaatcaaaaattgaagactatttcccagaatat
gcaaattatactgttcctgaagacgcaacaccagatgcaggagaagatcccaaagttaca
agagccaagttctttatccgggacctgtttttgaggatcagcacggccaccggtgacggc
aaacattactgctacccgcacttcacctgcgccgtggacacagagaacatccgcagggtg
ttcaacgactgccgcgacatcatccagcggatgcacctcaagcagtatgagctcttgtga

>gi568815580f:11751512_11952108|GENSCAN_predicted_peptide_5|246_aa
MERAFQTALWLLQPEVVFILGDIFDEGKWSTPEAWADDVERFQKMFRHPSHVQLKVVAGN
HDIGFHYDFVMVNSVALNGDGCGICSETEAELIEVSHRLNCSREHYPLYRRSDANCSGED
AAPAEERDIPFKENYDVLSREASQKPRLVLSGHTHSACEVHHGGRVPELSVPSFSWRNRN
NPSFIMGSITPTDYTLSKCYLPREDVVLIIYCGVVGFLVVLTLTHFGLLASPFLSGLNLL
GKRKTR

>gi568815580f:11751512_11952108|GENSCAN_predicted_CDS_5|741_bp
atggagagagcgttccagacagctctgtggttgctgcagccggaagtcgtcttcatcctg
ggggatatctttgatgaagggaagtggagcacccctgaggcctgggcggatgatgtggag
cggtttcagaaaatgttcagacacccaagtcatgtacagctgaaggtagttgctggaaac
catgacattggcttccattatgactttgtgatggtcaacagcgtggcgctgaacggggat
ggctgtggcatctgctctgaaacagaagcagagctcattgaagtttctcacagactgaac
tgctcccgagagcattatcctctgtatcggagaagtgatgctaactgttctggggaagac
gctgctcctgcagaggaaagggacatcccatttaaggagaactatgacgtgctttcacgg
gaggcatcacaaaagccgcgcctggttctcagtggccacacgcacagcgcctgcgaggtg
caccacgggggccgagtccccgagctcagcgtcccatctttcagttggaggaacagaaac
aaccccagtttcatcatgggtagcatcacgcccacagactacaccctctccaagtgctac
ctcccacgtgaggatgtggttttgatcatctactgtggagtggtgggcttccttgtggtc
ctcacactcactcactttgggcttctagcctcaccttttctttctggtttgaacttgctc
ggaaagcgtaagacaagatga

>gi568815580f:11751512_11952108|GENSCAN_predicted_peptide_6|214_aa
MRIGKRRNTGRKFREIQPDKDVAAGADSGDGGRGHKPRNATGGLSRWKRQGMNDPADAQV
SCHHLSFSPVLRRSNLPKEEHLRRNDIKDVQSYHQKNNEGQNSGKAVLTLTVYYRVQMNN
QMKKYPGQVFPSAVHINADGNLMKDSEQNHPAKSLPKRLRPPLMPAAGLDLARGPAPPPL
SLDSPGRRPRDRLGSAGKTLQPELEPGPTCPAPS

>gi568815580f:11751512_11952108|GENSCAN_predicted_CDS_6|645_bp
atgagaattggaaagagacgtaacactggaaggaagttcagagagattcaacctgacaag
gatgtggccgctggtgctgactccggagatggaggaaggggccacaagcccaggaatgcc
acaggtggcctctcaaggtggaaaaggcaaggaatgaatgatcctgcagatgctcaggtg
tcctgccatcacctgagttttagcccagtgttaaggagaagtaacctgcctaaggaggag
cacttgagaagaaatgacatcaaagatgtacaaagttatcatcagaaaaacaatgaaggc
cagaactcaggaaaagctgtgcttactcttaccgtttattatagagtacaaatgaacaac
cagatgaagaagtacccaggacaagtatttccatctgctgtccatatcaatgctgacggc
aacctcatgaaagactctgagcagaaccaccctgctaagtcactcccaaagagactgagg
ccccccctgatgccagctgcgggcctggacctagcccggggccctgcccctccgcccctc
tcgctggacagcccaggccggcgcccgagggataggctcgggagcgcggggaagacgctg
cagccggagctggagccagggcccacctgtccagcgccgtcctga