Result of FASTA (omim) for
pF1KE2322
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2322, 1335 aa
1>>>pF1KE2322 1335 - 1335 aa - 1335 aa
Library: /omim/omim.rfq.tfa
65951994 residues in 93482 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3751+/-0.000436; mu= 13.9578+/- 0.027
mean_var=143.5082+/-29.598, 0's: 0 Z-trim(114.3): 41 B-trim: 0 in 0/55
Lambda= 0.107062
statistics sampled from 25125 (25166) to 25125 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.269), width: 16
Scan time: 8.170
The best scores are: opt bits E(93482)
NP_065812 (OMIM: 607130) regulatory-associated pro (1335) 9008 1404.5 0
NP_001156506 (OMIM: 607130) regulatory-associated (1177) 4501 708.3 8.8e-203
>>NP_065812 (OMIM: 607130) regulatory-associated protein (1335 aa)
initn: 9008 init1: 9008 opt: 9008 Z-score: 7523.8 bits: 1404.5 E(93482): 0
Smith-Waterman score: 9008; 100.0% identity (100.0% similar) in 1335 aa overlap (1-1335:1-1335)
10 20 30 40 50 60
pF1KE2 MESEMLQSPLLGLGEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MESEMLQSPLLGLGEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 QSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYIPLSIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 QSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYIPLSIY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 DLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 DLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 IQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 RLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 NCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 NCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 TMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 TMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 QSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 QSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 VIVNSYHTGQEACLQGNLIAICLEQLNDPHPLLRQWVAICLGRIWQNFDSARWCGVRDSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 VIVNSYHTGQEACLQGNLIAICLEQLNDPHPLLRQWVAICLGRIWQNFDSARWCGVRDSA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 HEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLVSDGSPMVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 HEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLVSDGSPMVR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 KELVVALSHLVVQYESNFCTVALQFIEEEKNYALPSPATTEGGSLTPVRDSPCTPRLRSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 KELVVALSHLVVQYESNFCTVALQFIEEEKNYALPSPATTEGGSLTPVRDSPCTPRLRSV
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 SSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 SSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILS
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 FETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 FETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYK
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE2 ATVNARPQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ATVNARPQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRD
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE2 LPSGRPGTTGPAGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATVQTGFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LPSGRPGTTGPAGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATVQTGFC
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE2 DWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 DWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLN
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE2 RNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQD
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE2 CSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 CSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMS
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE2 SGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRRMALS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 SGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRRMALS
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE2 ECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNVLQIVKGLTALD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNVLQIVKGLTALD
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE2 IHPQADLIACGSVNQFTAIYNSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 IHPQADLIACGSVNQFTAIYNSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGS
1270 1280 1290 1300 1310 1320
1330
pF1KE2 NDYYISVYSVEKRVR
:::::::::::::::
NP_065 NDYYISVYSVEKRVR
1330
>>NP_001156506 (OMIM: 607130) regulatory-associated prot (1177 aa)
initn: 4501 init1: 4501 opt: 4501 Z-score: 3762.3 bits: 708.3 E(93482): 8.8e-203
Smith-Waterman score: 7599; 88.2% identity (88.2% similar) in 1335 aa overlap (1-1335:1-1177)
10 20 30 40 50 60
pF1KE2 MESEMLQSPLLGLGEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MESEMLQSPLLGLGEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 QSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYIPLSIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYIPLSIY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 DLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 RLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 NCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 TMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 QSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILA
:::::::::::::::::::::::
NP_001 QSSARELRPLLVFIWAKILAVDS-------------------------------------
490 500
550 560 570 580 590 600
pF1KE2 VIVNSYHTGQEACLQGNLIAICLEQLNDPHPLLRQWVAICLGRIWQNFDSARWCGVRDSA
NP_001 ------------------------------------------------------------
610 620 630 640 650 660
pF1KE2 HEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLVSDGSPMVR
NP_001 ------------------------------------------------------------
670 680 690 700 710 720
pF1KE2 KELVVALSHLVVQYESNFCTVALQFIEEEKNYALPSPATTEGGSLTPVRDSPCTPRLRSV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 -ELVVALSHLVVQYESNFCTVALQFIEEEKNYALPSPATTEGGSLTPVRDSPCTPRLRSV
510 520 530 540 550 560
730 740 750 760 770 780
pF1KE2 SSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILS
570 580 590 600 610 620
790 800 810 820 830 840
pF1KE2 FETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYK
630 640 650 660 670 680
850 860 870 880 890 900
pF1KE2 ATVNARPQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATVNARPQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRD
690 700 710 720 730 740
910 920 930 940 950 960
pF1KE2 LPSGRPGTTGPAGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATVQTGFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPSGRPGTTGPAGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATVQTGFC
750 760 770 780 790 800
970 980 990 1000 1010 1020
pF1KE2 DWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLN
810 820 830 840 850 860
1030 1040 1050 1060 1070 1080
pF1KE2 RNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQD
870 880 890 900 910 920
1090 1100 1110 1120 1130 1140
pF1KE2 CSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMS
930 940 950 960 970 980
1150 1160 1170 1180 1190 1200
pF1KE2 SGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRRMALS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRRMALS
990 1000 1010 1020 1030 1040
1210 1220 1230 1240 1250 1260
pF1KE2 ECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNVLQIVKGLTALD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNVLQIVKGLTALD
1050 1060 1070 1080 1090 1100
1270 1280 1290 1300 1310 1320
pF1KE2 IHPQADLIACGSVNQFTAIYNSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IHPQADLIACGSVNQFTAIYNSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGS
1110 1120 1130 1140 1150 1160
1330
pF1KE2 NDYYISVYSVEKRVR
:::::::::::::::
NP_001 NDYYISVYSVEKRVR
1170
1335 residues in 1 query sequences
65951994 residues in 93482 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Jun 19 14:31:27 2019 done: Wed Jun 19 14:31:29 2019
Total Scan time: 8.170 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]