Result of FASTA (ccds) for pF1KE2322
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2322, 1335 aa
  1>>>pF1KE2322     1335 - 1335 aa - 1335 aa
Library: human.CCDS.faa
  18921897 residues in 33420 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.8145+/-0.00112; mu= 10.7180+/- 0.067
 mean_var=125.4528+/-25.481, 0's: 0 Z-trim(106.3): 26  B-trim: 0 in 0/50
 Lambda= 0.114508
 statistics sampled from 9029 (9043) to 9029 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.617), E-opt: 0.2 (0.271), width:  16
 Scan time:  2.510

The best scores are:                                      opt bits E(33420)
CCDS11773.1 RPTOR gene_id:57521|Hs109|chr17        (1335) 9008 1500.5       0
CCDS54175.1 RPTOR gene_id:57521|Hs109|chr17        (1177) 4501 756.0 1.4e-217


>>CCDS11773.1 RPTOR gene_id:57521|Hs109|chr17             (1335 aa)
 initn: 9008 init1: 9008 opt: 9008  Z-score: 8042.9  bits: 1500.5 E(33420):    0
Smith-Waterman score: 9008; 100.0% identity (100.0% similar) in 1335 aa overlap (1-1335:1-1335)

               10        20        30        40        50        60
pF1KE2 MESEMLQSPLLGLGEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MESEMLQSPLLGLGEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 ALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 QSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYIPLSIY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYIPLSIY
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 DLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 IQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 RLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSY
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 NCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 NCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE2 TMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE2 QSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILA
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE2 VIVNSYHTGQEACLQGNLIAICLEQLNDPHPLLRQWVAICLGRIWQNFDSARWCGVRDSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VIVNSYHTGQEACLQGNLIAICLEQLNDPHPLLRQWVAICLGRIWQNFDSARWCGVRDSA
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE2 HEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLVSDGSPMVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 HEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLVSDGSPMVR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KE2 KELVVALSHLVVQYESNFCTVALQFIEEEKNYALPSPATTEGGSLTPVRDSPCTPRLRSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KELVVALSHLVVQYESNFCTVALQFIEEEKNYALPSPATTEGGSLTPVRDSPCTPRLRSV
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KE2 SSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILS
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KE2 FETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYK
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KE2 ATVNARPQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ATVNARPQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRD
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KE2 LPSGRPGTTGPAGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATVQTGFC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LPSGRPGTTGPAGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATVQTGFC
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KE2 DWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLN
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KE2 RNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQD
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KE2 CSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 CSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMS
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KE2 SGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRRMALS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRRMALS
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KE2 ECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNVLQIVKGLTALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNVLQIVKGLTALD
             1210      1220      1230      1240      1250      1260

             1270      1280      1290      1300      1310      1320
pF1KE2 IHPQADLIACGSVNQFTAIYNSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IHPQADLIACGSVNQFTAIYNSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGS
             1270      1280      1290      1300      1310      1320

             1330     
pF1KE2 NDYYISVYSVEKRVR
       :::::::::::::::
CCDS11 NDYYISVYSVEKRVR
             1330     

>>CCDS54175.1 RPTOR gene_id:57521|Hs109|chr17             (1177 aa)
 initn: 4501 init1: 4501 opt: 4501  Z-score: 4019.8  bits: 756.0 E(33420): 1.4e-217
Smith-Waterman score: 7599; 88.2% identity (88.2% similar) in 1335 aa overlap (1-1335:1-1177)

               10        20        30        40        50        60
pF1KE2 MESEMLQSPLLGLGEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MESEMLQSPLLGLGEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 ALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 QSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYIPLSIY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYIPLSIY
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 DLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 IQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 RLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSY
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 NCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE2 TMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE2 QSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILA
       :::::::::::::::::::::::                                     
CCDS54 QSSARELRPLLVFIWAKILAVDS-------------------------------------
              490       500                                        

              550       560       570       580       590       600
pF1KE2 VIVNSYHTGQEACLQGNLIAICLEQLNDPHPLLRQWVAICLGRIWQNFDSARWCGVRDSA
                                                                   
CCDS54 ------------------------------------------------------------
                                                                   

              610       620       630       640       650       660
pF1KE2 HEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLVSDGSPMVR
                                                                   
CCDS54 ------------------------------------------------------------
                                                                   

              670       680       690       700       710       720
pF1KE2 KELVVALSHLVVQYESNFCTVALQFIEEEKNYALPSPATTEGGSLTPVRDSPCTPRLRSV
        :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 -ELVVALSHLVVQYESNFCTVALQFIEEEKNYALPSPATTEGGSLTPVRDSPCTPRLRSV
            510       520       530       540       550       560  

              730       740       750       760       770       780
pF1KE2 SSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILS
            570       580       590       600       610       620  

              790       800       810       820       830       840
pF1KE2 FETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 FETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYK
            630       640       650       660       670       680  

              850       860       870       880       890       900
pF1KE2 ATVNARPQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ATVNARPQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRD
            690       700       710       720       730       740  

              910       920       930       940       950       960
pF1KE2 LPSGRPGTTGPAGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATVQTGFC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LPSGRPGTTGPAGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATVQTGFC
            750       760       770       780       790       800  

              970       980       990      1000      1010      1020
pF1KE2 DWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLN
            810       820       830       840       850       860  

             1030      1040      1050      1060      1070      1080
pF1KE2 RNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQD
            870       880       890       900       910       920  

             1090      1100      1110      1120      1130      1140
pF1KE2 CSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 CSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMS
            930       940       950       960       970       980  

             1150      1160      1170      1180      1190      1200
pF1KE2 SGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRRMALS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRRMALS
            990      1000      1010      1020      1030      1040  

             1210      1220      1230      1240      1250      1260
pF1KE2 ECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNVLQIVKGLTALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNVLQIVKGLTALD
           1050      1060      1070      1080      1090      1100  

             1270      1280      1290      1300      1310      1320
pF1KE2 IHPQADLIACGSVNQFTAIYNSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IHPQADLIACGSVNQFTAIYNSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGS
           1110      1120      1130      1140      1150      1160  

             1330     
pF1KE2 NDYYISVYSVEKRVR
       :::::::::::::::
CCDS54 NDYYISVYSVEKRVR
           1170       




1335 residues in 1 query   sequences
18921897 residues in 33420 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Jun 19 14:31:27 2019 done: Wed Jun 19 14:31:27 2019
 Total Scan time:  2.510 Total Display time:  0.080

Function used was FASTA [36.3.4 Apr, 2011]
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