GENSCAN 1.0	Date run:  5-Nov-116	Time: 19:30:36

Sequence gi568815595r:87159897_87376462 : 216566 bp : 35.61% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -   4152   4147    6                               1.05
 1.04 Term -  30404  30187  218  0  2   47   48   176 0.812   5.82
 1.03 Intr -  34725  34656   70  0  1   77  110    23 0.939   1.24
 1.02 Intr -  36432  36205  228  0  0   74   37   104 0.467   1.04
 1.01 Init -  41356  41288   69  1  0   48  116    87 0.502   8.60
 1.00 Prom -  43746  43707   40                              -6.85

 2.00 Prom +  48521  48560   40                              -7.25
 2.01 Init +  59414  59493   80  1  2   80   49   107 0.749   6.58
 2.02 Intr +  60587  60692  106  2  1   59   68    13 0.365  -4.30
 2.03 Intr +  66745  66872  128  0  2   77   99    58 0.678   4.36
 2.04 Intr +  67265  67439  175  2  1   66   33   206 0.253  11.92
 2.05 Intr +  67909  68120  212  0  2   66   52   169 0.189   7.89
 2.06 Intr +  73695  73777   83  0  2   88  103    30 0.549   2.86
 2.07 Intr +  80803  80894   92  2  2   70  119   120 0.998  12.09
 2.08 Intr +  85818  86012  195  2  0  111  106   137 0.957  16.49
 2.09 Intr +  89979  90081  103  2  1   -4   80   103 0.772  -0.87
 2.10 Intr +  93508  93614  107  2  2   82   86   218 0.995  20.01
 2.11 Term +  93816  93926  111  2  0   52   38   176 0.998   6.58
 2.12 PlyA +  94791  94796    6                               1.05

 3.07 PlyA -  95585  95580    6                               1.05
 3.06 Term - 100208  99998  211  1  1   51   44   218 0.943   9.48
 3.05 Intr - 101437 101377   61  2  1   71   61    59 0.962  -1.63
 3.04 Intr - 102339 102175  165  1  0   95   64   140 0.996  11.31
 3.03 Intr - 104616 104392  225  1  0   99   77   197 0.980  16.73
 3.02 Intr - 113600 113451  150  0  0   42  110    41 0.602   0.91
 3.01 Init - 116566 116425  142  1  1   52   84    88 0.891   5.14
 3.00 Prom - 116727 116688   40                              -3.35

 4.00 Prom + 125161 125200   40                              -2.75
 4.01 Sngl + 163372 164082  711  0  0   86   36   926 0.997  83.17
 4.02 PlyA + 165021 165026    6                               1.05

 5.03 PlyA - 165149 165144    6                               1.05
 5.02 Term - 183456 181985 1472  1  2   43   36   534 0.108  33.50
 5.01 Init - 184245 183579  667  0  1   49  -33   261 0.140   5.52
 5.00 Prom - 184337 184298   40                              -6.15

 6.02 PlyA - 184506 184501    6                               1.05
 6.01 Sngl - 185714 185385  330  2  0   88   44   320 0.903  23.37
 6.00 Prom - 210254 210215   40                              -3.35


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:87159897_87376462|GENSCAN_predicted_peptide_1|194_aa
MMKTDENQKDWPQVPELFGGLEKVGIECLCFSRCTVQAVSESTILESGGRWPSFTTPPGP
APVGTLHVGSSPTFPLCTALAEVFHEGSVPSADFCLYIQRSKVERLSQRSTGIGVLSSLQ
TAVFVGYTRISCGLYEVGWVYSDGLRAYTLPEQSITSNINLLQQAGEKTKSKVVIVYISR
ENLKKDFETNNEKM

>gi568815595r:87159897_87376462|GENSCAN_predicted_CDS_1|585_bp
atgatgaaaactgatgaaaatcaaaaagattggccacaagttccagagctgtttggaggt
ctagagaaggttggcattgagtgtctgtgcttttccagatgcacagtgcaagctgtcagt
gaatctaccattctggagtctggaggacggtggccctctttcacaactccaccaggccct
gccccagtggggactctgcatgtgggctccagccccacatttcccttatgcactgcccta
gcagaggttttccatgagggctctgtcccttcagcagacttctgtctgtatatccagaga
tccaaagttgaaagactttcacaaagaagcacaggaattggagtcttatcttcattgcaa
actgcagtatttgtaggttacacaaggatcagctgtggcttatatgaagtcggttgggtt
tattctgatggtttacgagcttatactctgccagagcagtcaataacaagtaatataaac
ttgctacagcaagctggagagaaaacaaaaagcaaagttgttattgtctacatttcaaga
gaaaacctgaagaaagattttgaaacgaacaatgagaaaatgtga

>gi568815595r:87159897_87376462|GENSCAN_predicted_peptide_2|463_aa
MDNDSKGQHIRVNNVNSDLNKHMEDVRRTALERLTPMIQSPPTSSLPQHMGIMGATIQDE
IWARTLNKKCSIKKLPFVLETPPTLDTGSPETHAGSSESGAGGGSSRLAPLPTPGAGGTG
SRRREESGRGFKLRSAQAPHNAQAPPRSDFSKKCVSSRSPELRQDPERFEEASWPLSVNK
LGNLMDFLLVSSASIVALQLGDILLVGIHTGNWQSRNGEGGDNRLQLGNEVGSGTIRICP
VLLPVSQCPLFPLTLAVTELADVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMA
KIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQ
AVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEI
GIEISGKMAKAPSAARSLPSASTSKATISDEEIERQLKALGVD

>gi568815595r:87159897_87376462|GENSCAN_predicted_CDS_2|1392_bp
atggacaatgatagcaaaggacagcatattcgtgtcaataatgtcaacagtgaccttaat
aaacatatggaagatgttaggagaacagcactggaaagactcacccccatgattcaatca
cctcccaccagctccctcccacaacacatgggaattatgggagctacaattcaagatgag
atttgggcaagaaccttaaacaaaaagtgtagcattaaaaaacttcccttcgtcctcgag
acccccccaactctagacactggatccccggagacccacgctgggtcgtcggagtctgga
gccgggggcggcagctccagactcgccccgctgccaactcccggtgcaggaggaactggc
agccgcagacgtgaggaaagcggccgcggcttcaaactccgtagtgcgcaggcgccacac
aacgcgcaggcgccgcctagaagtgacttctccaaaaagtgtgttagttcccggtcacct
gagctccggcaggatcctgagcgtttcgaggaggctagctggcccttgagtgtcaataaa
cttggaaatctgatggatttcttgttggtttcctctgcttcgattgttgctcttcagttg
ggcgatatactacttgtaggcatccatacaggaaactggcagtctcggaatggggaggga
ggggataacaggctccagttaggaaatgaagttgggtctggcacaatcaggatttgtcca
gtgctgttaccagtgtcacagtgcccactattcccactgacactagctgttacagagctt
gcagatgtaataaaggaacagaatcgagagttacgaggtacacagagggctataatcaga
gatcgagcagctttagagaaacaagaaaaacagctggaattagaaattaagaaaatggcc
aagattggtaataaggaagcttgcaaagttttagccaaacaacttgtgcatctacggaaa
cagaagacgagaacttttgctgtaagttcaaaagttacttctatgtctacacaaacaaaa
gtgatgaattcccaaatgaagatggctggagcaatgtctactacagcaaaaacaatgcag
gcagttaacaagaagatggatccacaaaagacattacaaacaatgcagaatttccagaag
gaaaacatgaaaatggaaatgactgaagaaatgatcaatgatacacttgatgacatcttt
gacggttctgatgacgaagaagaaagccaggatattgtgaatcaagttcttgatgaaatt
ggaattgaaatttctggaaagatggccaaagctccatcagctgctcgaagcttaccatct
gcctctacttcaaaggctacaatctcagatgaagagattgaacggcaactcaaggcttta
ggagtagattag

>gi568815595r:87159897_87376462|GENSCAN_predicted_peptide_3|317_aa
MSCQAFTSADTFIPLNSDASATLPLIMHHSAAECLPVSNHATNVMSTVPSILSLIQTPKC
LCTHFSVTTLGNTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHTLSHGFPPIH
QPLLAEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVRRIKLGYTQTNVG
EALAAVHGSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEKVGANERK
RKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVKT
SLNQSLFSISKEHLECR

>gi568815595r:87159897_87376462|GENSCAN_predicted_CDS_3|954_bp
atgagttgccaagcttttacttcggctgatacctttatacctctgaattctgacgcctct
gcaactctgcctctgataatgcatcacagtgctgccgagtgtctaccagtctccaaccat
gccaccaatgtgatgtctacagtcccatctattttgtctttgatccaaactcctaaatgt
ttgtgcacacatttctcggtgacaacgttgggaaacacagcaacaggacttcattattct
gttccttcctgtcattatggaaaccagccatcaacctatggagtgatggcaggtagttta
accccttgtctttataaatttcctgaccacaccttgagtcatggatttcctcctatacac
cagcctcttctggcagaggaccccacagctgctgatttcaagcaggaactcaggcggaaa
agtaaattggtggaagagccaatagacatggattctccagaaatcagagaacttgaaaag
tttgccaatgaatttaaagtgagacgaattaaattaggatacacccagacaaatgttggg
gaggccctggcagctgtgcatggctctgaattcagtcaaacaacaatctgccgatttgaa
aatctgcagctcagctttaaaaatgcatgcaaactgaaagcaatattatccaaatggctg
gaggaagctgagcaagtaggagctttgtacaatgaaaaagtgggagcaaatgaaaggaaa
agaaaacgaagaacaactataagcattgctgctaaagatgctctggagagacactttgga
gaacagaataaaccttcttctcaagagatcatgaggatggctgaagaactgaatctggag
aaagaagtagtaagagtttggttttgcaaccggaggcagagagaaaaacgggtgaaaaca
agtctgaatcagagtttattttctatttctaaggaacatcttgagtgcagataa

>gi568815595r:87159897_87376462|GENSCAN_predicted_peptide_4|236_aa
MSIRVTQKFYKVFTSGPRAFSSNSYTSGPGVHISFSSFSRVGSSSFWDGLGRGCDGASSK
GGITAVTVNQSLLSPLNLQVDPNIQAMCTQEKEQIKTLNNKFASFIDKVWLLEQQNKMLE
TKWSLLQQQKMTLSNMHSMLQSYINNLQRQLETLGQENLKLGAELGSMQGLVEGFKNKYK
DKINKRTEMENEFVLIKKVVDDAYMNKAELESHLEGLTDEINFLRQLYEEEIRELS

>gi568815595r:87159897_87376462|GENSCAN_predicted_CDS_4|711_bp
atgtccatcagggtgacccagaagttctacaaggtgttcacctctggcccccgggccttc
agcagcaactcctacacaagtgggcctggtgtccacatcagtttctcaagcttctcccga
gtgggcagcagcagcttctgggatggcctgggcagaggctgtgatggggccagcagcaag
ggaggcatcacagctgtcacagtcaaccagagcctgctgagcccccttaacctgcaggtg
gaccccaacatccaggccatgtgcacccaggagaaggagcagatcaagaccctcaacaac
aagtttgcctccttcattgacaaggtatggttgctggagcagcagaacaagatgctggag
acgaagtggagccttctgcagcagcagaagatgactctgagtaacatgcacagcatgtta
cagagctacatcaacaaccttcagcggcagctggagactctgggtcaggagaacctgaag
ctgggggcagagcttggcagcatgcaggggctagtggagggcttcaagaacaaatataag
gataagatcaataagcgtacagagatggagaatgaatttgtcctcatcaagaaggttgta
gatgacgcttacatgaacaaggcagagctggagtctcacctggaagggctgactgatgag
atcaacttcctcaggcagctgtatgaagaggagatccgggagctgtcctag

>gi568815595r:87159897_87376462|GENSCAN_predicted_peptide_5|712_aa
MGDFNTPLSILDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYS
KIDHILGSKALLSKCKGKEIITNYLSDHSAIKLELRIKNLTQNHSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFMALNAHKRKQERSKIDTLTSQLK
EQEKQEQTYSKDSRRQEITKIRAELKEIETQKPSKKFMNPGAEIQTTIREYYEHLYANKL
ENLEEMDKFLDTYTLPRLNQEEVESLNRPITGAEIVAIINSLPTKKSPGPDGFTAEFYQR
YKEELVPFLLKLFQSIEKEGILPNSFYEASVILIPKPGRDTTKKENFRPISLMNIDAKIL
NKILANRIQQHIKKLIHHDQVGFIPAMQGWFNTRKSINVIQHINKTKDKNHMIISIDAEK
AFHKIQQPFMLKTLNKLGIHGMYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPL
SPLLFNIVLEVLARAIRQEKEINGIQLRKEEVKLSLFAGDMIVYLENPIVSAQNLLKLIS
NFSKVSGYKINVQKSQAFLYTNNRQTESQIMSALPFTIASKRIQYLGIQLTKDVKELFKE
NYKPLLEEIKEGTNRWKNTPCSWVGRINIMNMAILPKVIYRFNAISIKLPMTFFIELEKT
TLKFIWNHKRDRIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQTEI

>gi568815595r:87159897_87376462|GENSCAN_predicted_CDS_5|2139_bp
atgggagattttaacaccccactgtcaatattagacagatcaacgagacagaaagtcaac
aaggatacccaggaattgaactcagctctgcaccaagcagacctaatagacatctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatacttggaagtaaagctctcctcagcaaatgtaagggaaaagaaatt
ataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctc
actcaaaaccactcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaca
acataccagaatctctgggacgcattcaaagcagtgtgtagagggaaatttatggcacta
aatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaa
gaacaagaaaagcaagagcaaacatattcaaaagatagcagaaggcaagaaataactaaa
atcagagcagaactgaaggaaatagagacacaaaaaccctccaaaaaattcatgaatcca
ggagctgaaatacaaactaccatcagagaatactatgaacacctctacgcaaataaacta
gaaaatctagaagaaatggataaattcctcgacacatacaccctcccaagactaaaccag
gaagaagttgaatctctgaatagaccaataacaggagctgaaattgtggcaataatcaat
agcttaccaaccaaaaagagtccaggaccagatggcttcacagccgaattctaccagagg
tacaaggaggaactggtaccattccttctgaaactattccaatcaatagaaaaagaggga
atcctccctaactcattttatgaggccagcgtcatcctgataccaaagccgggcagagac
acaaccaaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatcctc
aataaaatactggcaaaccgaatccagcagcacatcaaaaagcttatccaccatgatcaa
gtgggcttcatccctgcgatgcaaggttggttcaatacacgcaaatcaataaatgtaatc
cagcatataaacaaaaccaaagacaaaaaccacatgattatctcaatagatgcagaaaag
gcctttcacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtattcat
gggatgtatctcaaaataataagagctatctatgacaaacccacagccaatatcatactg
aatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccctctc
tcaccactcctattcaacatagtgttggaagttctggccagggcaattaggcaggagaag
gaaataaacggtattcaattaagaaaagaggaagtcaaattgtccctgtttgctggcgac
atgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcttatac
accaacaacagacaaacagagagccaaatcatgagtgcactcccattcacaattgcttca
aagagaatacaatacctaggaatccaacttacaaaggatgtgaaggagctcttcaaggag
aactacaaaccactgctcgaggaaataaaagagggtacaaacagatggaagaacactcca
tgctcatgggtaggaagaatcaatatcatgaatatggccatactgcccaaggtaatttac
agattcaatgccatctccatcaagctaccaatgacattcttcatagaattggaaaaaact
actttaaagttcatatggaaccataaaagagaccggatcgccaagtcaattctaagccaa
aagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagta
accaaaacagcatggtactggtaccaaacagagatatag

>gi568815595r:87159897_87376462|GENSCAN_predicted_peptide_6|109_aa
MGKKKSQKTGNSKKQSASPPPKERSSSPATEQSWMENDFHELREEDFRRSNYSELLEDIQ
TKGKEVENFEKSLEECIIRITNTEKCLKELMELKTKARELREECRSLRS

>gi568815595r:87159897_87376462|GENSCAN_predicted_CDS_6|330_bp
atggggaaaaaaaagagccaaaaaactggaaactctaaaaagcagagtgcctctcctcct
ccaaaggaacgcagttcctcaccagcaacggaacaaagctggatggagaatgactttcac
gagctgagagaagaagacttcagacgatcaaattactccgagctactggaggacattcaa
accaaaggcaaagaagttgaaaactttgaaaaaagtttagaagaatgtataattagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaacta
cgtgaagaatgcagaagcctcaggagctga