GENSCAN 1.0	Date run:  5-Nov-116	Time: 19:44:31

Sequence gi568815591f:66841866_67053372 : 211507 bp : 45.34% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -    253    248    6                               1.05
 1.06 Term -   3273   2622  652  2  1   28   54   415 0.116  25.61
 1.05 Intr -  37618  37566   53  1  2   89   50    68 0.013   0.81
 1.04 Intr -  38577  38460  118  2  1   30  123    51 0.235   3.27
 1.03 Intr -  64702  64610   93  0  0   71   76    52 0.092   1.38
 1.02 Intr -  66969  66728  242  0  2  114   69    98 0.883   6.85
 1.01 Init -  67178  67041  138  2  0   87  108    56 0.707   7.66
 1.00 Prom -  68251  68212   40                              -6.56

 2.00 Prom +  68977  69016   40                              -5.46
 2.01 Init +  72716  72961  246  1  0   86   12   385 0.055  28.30
 2.02 Intr +  99983 100159  177  1  0   95   65   291 0.923  27.62
 2.03 Intr + 103111 103396  286  0  1   79   85   183 0.992  14.01
 2.04 Intr + 106679 106829  151  0  1   71   75   143 0.848  10.52
 2.05 Intr + 109087 109270  184  1  1  109   95   181 0.986  20.69
 2.06 Intr + 111361 111504  144  0  0  103  105    27 0.975   6.38
 2.07 Term + 113637 113657   21  2  0  124   31    16 0.597  -2.19
 2.08 PlyA + 114263 114268    6                               1.05

 3.06 PlyA - 114668 114663    6                               1.05
 3.05 Term - 116316 116227   90  0  0   52   51    73 0.697  -2.28
 3.04 Intr - 116726 116574  153  2  0   95   52   133 0.796  10.67
 3.03 Intr - 128828 128790   39  2  0   81   80    33 0.026   0.22
 3.02 Intr - 129212 129177   36  2  0   95   87    11 0.040   0.16
 3.01 Init - 132833 132753   81  2  0   76   77    30 0.233   1.67
 3.00 Prom - 133471 133432   40                              -0.76

 4.08 PlyA - 134729 134724    6                               1.05
 4.07 Term - 146634 146506  129  0  0   79   47   187 0.999  11.88
 4.06 Intr - 149436 149272  165  0  0   17   60   192 0.992   9.46
 4.05 Intr - 151552 151352  201  1  0   51  109   200 0.999  17.88
 4.04 Intr - 152476 152347  130  0  1   32   94   107 0.948   6.40
 4.03 Intr - 153557 153425  133  0  1   34   67   244 0.932  16.60
 4.02 Intr - 155104 154888  217  1  1   96   78   196 0.696  17.48
 4.01 Init - 156244 156233   12  1  0   49  100    -8 0.418  -3.42
 4.00 Prom - 156612 156573   40                              -3.76

 5.00 Prom + 160578 160617   40                              -6.36
 5.01 Init + 164865 164876   12  2  0  114   68     3 0.494   1.27
 5.02 Intr + 167718 167819  102  2  0   75   73   117 0.996   9.27
 5.03 Intr + 172502 172696  195  1  0   60  100   182 0.999  16.21
 5.04 Intr + 175988 176278  291  1  0  105   59   247 0.974  20.83
 5.05 Intr + 183035 183157  123  1  0   64   81   176 0.976  15.28
 5.06 Term + 183339 183368   30  2  0   73   47    22 0.637  -5.55
 5.07 PlyA + 183520 183525    6                               1.05

 6.04 PlyA - 183619 183614    6                               1.05
 6.03 Term - 190436 190398   39  2  0  125   42    22 0.404  -1.51
 6.02 Intr - 208605 208558   48  0  0  129  116   -24 0.865   3.38
 6.01 Intr - 210041 209898  144  2  0   38  115   131 0.977  11.28

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  72716  73078  363  1  0   86   37   364 0.941  27.18
S.002 Term -  79975  79704  272  2  2    6   48   146 0.926  -1.95
S.003 Init -  80088  80004   85  0  1   77   83    67 0.879   6.08


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:66841866_67053372|GENSCAN_predicted_peptide_1|431_aa
MRPELPVMNWCFLTHLAIKWVVHSSIPSSDGGGIYVIGLQLVLKAQPEMMASWGVPYDQL
TEEEKTRGWFTGGSARYAGTTQKWTAAALQPLSGTSLMDSSEEKSFQWTELQAVHLVVHF
AWKEMARTSDSKFFRFGTQNGFLAPQLADSLLWNLVILNDRNPLHTAVAPGSLCILIKRQ
GSCSKTGGVYDATKQRSAATGKVDSKGTIPCVTDNQQHTEHGGEVAVTRHHSEDKTAQLQ
ALYRHSDDAEGLALLRRRGPAPVTSAKALPSDDREPRPSCGTNRNSRSGCRVVQKRACAD
AWPQPAGQCSQAPTRRPTPVSYKEELSHCLCYYYRRDFPACSVGRSKGLTLSEQALHTKR
LSPGGHKQKVGQKLLNGHCKPASSGCSRCRTLASPEAGYVRPPTPPPARDRGPRSVPRRP
APLILGRLGSL

>gi568815591f:66841866_67053372|GENSCAN_predicted_CDS_1|1296_bp
atgagacctgaactacctgtcatgaactggtgttttctgacccacctagccataaagtgg
gtcgtgcacagcagcattccatcatcagatggaggtggtatatatgtgatcgggctccag
ctggtcctgaaggcacaacctgaaatgatggcctcatggggagttccctatgatcagttg
acagaggaagagaagactaggggctggttcacaggtggttctgcacgatatgcaggcacc
acccaaaaatggacagctgcagcactacagcccctttctgggacatcccttatggacagc
agtgaagaaaaatctttccagtggacagaacttcaagcagtgcacctggttgtgcacttt
gcatggaaggaaatggccagaacatcggactccaagttcttcaggtttgggactcagaat
ggcttccttgctcctcagcttgcagacagcctattgtggaaccttgtgatcctaaatgac
cgaaatccactccatacagcagtggcccctggcagcctttgcattctcatcaagaggcag
ggtagctgttcaaagacaggtggtgtctatgatgcaactaagcagcgctcggcagccacg
gggaaagtggacagcaaagggaccattccctgtgtcactgataaccagcaacacacagaa
catggcggggaagtcgcggttaccaggcaccactctgaagacaaaacagcccagctccag
gcactgtaccgtcactctgacgacgcggaaggcctggcgctattgcgtcgccgagggccc
gcgcctgtgacgtcagcgaaggcgctccccagtgacgacagagagccacgcccctcatgt
ggaaccaatcggaactcgaggagcggctgccgggtcgtccagaagcgcgcatgcgcagac
gcgtggccacagccggccggtcagtgttcgcaggctccgacccggcggccaacaccagta
agctacaaggaggagctttcccactgcctgtgctactactaccggcgcgacttcccagcc
tgcagcgtagggcgcagcaagggcctgacgctgagcgagcaggcgctgcacaccaagcgg
ttgtcgcctggcgggcacaaacagaaggtcgggcagaagctccttaatggccactgcaag
ccggctagctccggctgcagccgttgccgcacactcgcctcacctgaggctgggtacgtg
cgccccccaacacctcctccagccagggaccggggaccccgcagcgtcccccgccgcccg
gcgccgctcatcctgggcaggctcggctccctctga

>gi568815591f:66841866_67053372|GENSCAN_predicted_peptide_2|402_aa
MAPAKKGGEKKKGHSAINEVVTREYTINIHKRIHEVGFKKRAPRALKEIQKYAMKEMGTL
DMHIDTRLNKAVWAKGISHTMSVELIRIMFSINPLENLKVYISSRPPLVVFMISVSAMAI
AFLTLGYFFKIKEIKSPEMAEDWNTFLLRFNDLDLCVSENETLKHLTNDTTTPESTMTSG
QARASTQSPQALEDSGPVNISVSITLTLDPLKPFGGYSRNVTHLYSTILGHQIGLSGREA
HEEINITFTLPTAWSSDDCALHGHCEQVVFTACMTLTASPGVFPVTVQPPHCVPDTYSNA
TLWYKIFTTARDANTKYAQDYNPFWCYKGAIGKVYHALNPKLTVIVPDDDRSLINLHLMH
TSYFLFVMVITMFCYAVIKGRPSKLRQSNPEFCPEKVALAEA

>gi568815591f:66841866_67053372|GENSCAN_predicted_CDS_2|1209_bp
atggctcccgcaaagaagggtggtgagaagaaaaagggccattctgccatcaacgaggtg
gtgacccgagaatacaccatcaacattcacaagcgcatccatgaagtgggcttcaagaag
cgtgcccctcgggcactcaaagaaattcagaaatatgccatgaaggagatgggaactcta
gacatgcacattgataccaggctcaacaaagctgtctgggccaaaggaatatcccatacc
atgtctgtggagctgatcagaataatgttcagcatcaaccccctggagaacctgaaggtg
tacatcagcagtcggcctcccctggtggtcttcatgatcagcgtaagcgccatggccata
gctttcctgaccctgggctacttcttcaaaatcaaggagattaaatccccagaaatggca
gaggattggaatacttttctgctacggttcaatgatttggacttgtgtgtatcagagaat
gaaaccctcaagcatctcacaaacgacaccacaactccggaaagtacaatgaccagcggg
caggcccgagcttccacccagtccccccaggccctggaggactcgggcccggtgaatatc
tcagtctcaatcaccctaaccctggacccactgaaacccttcggagggtattcccgcaac
gtcacccatctgtactcaaccatcttagggcatcagattggactttcaggcagggaagcc
cacgaggagataaacatcaccttcaccctgcctacagcgtggagctcagatgactgcgcc
ctccacggtcactgtgagcaggtggtattcacagcctgcatgaccctcacggccagccct
ggggtgttccccgtcactgtacagccaccgcactgtgttcctgacacgtacagcaacgcc
acgctctggtacaagatcttcacaactgccagagatgccaacacaaaatacgcccaagat
tacaatcctttctggtgttataagggggccattggaaaagtctatcatgctttaaatccc
aagcttacagtgattgttccagatgatgaccgttcattaataaatttgcatctcatgcac
accagttacttcctctttgtgatggtgataacaatgttttgctatgctgttatcaagggc
agacctagcaaattgcgtcagagcaatcctgaattttgtcccgagaaggtggctttggct
gaagcctaa

>gi568815591f:66841866_67053372|GENSCAN_predicted_peptide_3|132_aa
MPRDQTYVRLQPSKICRRFSQTLVVLLPCRRASSPSAMIVLALPMGARNCSWKTPIRLEE
EDAEQINSDVLFCKAHMHILQTRKINLEVNAITDQLLTIMQQESEMPEGELVLLHGAALN
SKRTPSVAHFES

>gi568815591f:66841866_67053372|GENSCAN_predicted_CDS_3|399_bp
atgccgagagatcaaacgtacgtaagacttcagcccagcaagatctgccgcagattttct
caaaccctggtggtccttttgccatgcagacgtgcctcttcgccttctgccatgattgta
ctggcattaccaatgggggctcgaaactgcagctggaaaacacccatccggctggaggaa
gaagacgcggagcaaataaattcagatgttttattctgtaaagcacatatgcacatactt
caaacacggaaaattaatctggaagtgaatgccataacagatcagctactgaccatcatg
cagcaagagtccgagatgcctgagggtgagctggtgctcctgcacggggccgccctgaac
agcaagcgcactccgtctgttgcacacttcgaatcctga

>gi568815591f:66841866_67053372|GENSCAN_predicted_peptide_4|328_aa
MILKSRQETRISDLDSPMIRTGTARRTELPRRVSGVPSACRPVGSHDTARPVLIGSEDEE
VGPEESPELRERKPVPAAMSIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSG
VEKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHT
QLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLK
EKMKIERAHMRLRFILPVNEGKKLKEKLKPLIKVIESEDYGQQLEIVCLIDPGCFREIDE
LIKKETKGKGSLEVLNLKDVEEGDEKFE

>gi568815591f:66841866_67053372|GENSCAN_predicted_CDS_4|987_bp
atgatattaaagagccgacaggagactaggatctcggacctggatagcccgatgattcgc
actggtaccgcgagacgcaccgagctacctcgccgcgttagcggcgtaccgagtgcctgc
agacctgtgggcagccatgacactgccaggccggtcctgattggttcagaggacgaagag
gtgggcccagaggaaagcccagagctccgggaaaggaagccagtgcccgccgcgatgtcg
atcttcacccccaccaaccagatccgcctaaccaatgtggccgtggtacggatgaagcgt
gccgggaagcgcttcgaaatcgcctgctacaaaaacaaggtcgtcggctggcggagcggc
gtggaaaaagacctcgatgaagttctgcagacccactcagtgtttgtaaatgtttctaaa
ggtcaggttgccaaaaaggaagatctcatcagtgcgtttggaacagatgaccaaactgaa
atctgtaagcagattttgactaaaggagaagttcaagtatcagataaagaaagacacaca
caactggagcagatgtttagggacattgcaactattgtggcagacaaatgtgtgaatcct
gaaacaaagagaccatacaccgtgatccttattgagagagccatgaaggacatccactat
tcggtgaaaaccaacaagagtacaaaacagcaggctttggaagtgataaagcagttaaaa
gagaaaatgaagatagaacgtgctcacatgaggcttcggttcatccttccagtcaatgaa
ggcaagaagctgaaagaaaagctcaagccactgatcaaggtcatagaaagtgaagattat
ggccaacagttagaaatcgtatgtctgattgacccgggctgcttccgagaaattgatgag
ctaataaaaaaggaaactaaaggcaaaggttctttggaagtactcaatctgaaagatgta
gaagaaggagatgagaaatttgaatga

>gi568815591f:66841866_67053372|GENSCAN_predicted_peptide_5|250_aa
MPGQGFATVLAEAVTSLDLPVAIINLKEYDPDDHLIEEVTSKNVCVFLVATYTDGLPTES
AEWFCKWLEEASIDFRFGKTYLKGMRYAVFGLGNSAYASHFNKVGKNVDKWLWMLGAHRV
MSRGEGDCDVVKSKHGSIEADFRAWKTKFISQLQALQKGERKKSCGGHCKKGKCESHQHG
SEEREEGSHEQDELHHRDTEEEEPFESSSEEEFGGEDHQSLNSIVDVEDLGKIMDHVKKE
KACESQLIRG

>gi568815591f:66841866_67053372|GENSCAN_predicted_CDS_5|753_bp
atgcccggccagggattcgcaacagttcttgctgaagcagttacatccctggatctgcct
gtggccattattaatctaaaagaatatgatccagatgatcatctgatagaagaggtgact
agtaaaaatgtctgtgtcttcctggttgcgacatacactgacggcctaccaactgaaagt
gcagagtggttctgcaaatggttagaggaagcatccattgattttcgatttggcaaaact
tacctgaagggtatgagatatgcggtatttggcctgggaaattctgcctatgctagccac
ttcaacaaggttggcaaaaatgttgacaagtggctctggatgcttggcgcgcatcgtgtg
atgagtcgaggggagggcgactgcgacgtggttaaaagcaagcacggcagcattgaggcc
gacttcagagcatggaagaccaagttcatctcccagctgcaggcacttcagaaaggggag
agaaagaagtcctgtggcggccactgcaagaaaggcaaatgtgaatctcaccaacatggc
tcagaggagagggaggaaggatctcatgagcaggatgaattgcatcatagagacaccgag
gaggaagaaccctttgagagctccagtgaagaagagtttggtggtgaggaccatcagagc
ctaaattccattgttgatgttgaagatttgggcaaaattatggatcatgtgaagaaagaa
aaggcctgtgaaagtcagctcatcagaggataa

>gi568815591f:66841866_67053372|GENSCAN_predicted_peptide_6|76_aa
QKITELEDTVIENEGKVKPFSDIRKLKEFTTNKPALQEMFKKSLESPQETNIITHSCNYN
LLNKLLPNPTEIQNSS

>gi568815591f:66841866_67053372|GENSCAN_predicted_CDS_6|231_bp
caaaaaattactgaacttgaagacacagtgatagaaaatgaaggcaaagtaaagccattt
tcagatatacgaaagctgaaagaattcaccaccaacaaacctgcactacaagagatgttc
aaaaagtccttggagtcgccacaggaaactaatattattactcattcatgcaactataac
ctccttaataagctgctcccaaaccctacggagatccaaaacagcagctaa