GENSCAN 1.0	Date run:  6-Nov-116	Time: 20:11:28

Sequence gi568815592f:15146540_15620248 : 473709 bp : 43.79% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1025   1073   49  1  1   89   89    40 0.450   3.31
 1.02 Intr +   2504   2576   73  0  1  103  100   -18 0.289  -0.64
 1.03 Intr +  13111  13207   97  1  1   78  105    89 0.833   9.61
 1.04 Intr +  87803  87940  138  1  0  123   29    52 0.154   3.46
 1.05 Term +  98388  98471   84  2  0   46   32   105 0.029  -1.65
 1.06 PlyA +  99906  99911    6                               1.05

 2.02 PlyA - 101063 101058    6                               1.05
 2.01 Sngl - 101759 101535  225  2  0   49   48   301 0.840  15.34
 2.00 Prom - 107343 107304   40                              -4.36

 3.04 PlyA - 108178 108173    6                               1.05
 3.03 Term - 122598 122525   74  1  2   72   44    94 0.658   1.47
 3.02 Intr - 128728 128531  198  2  0   70   76    65 0.592   2.82
 3.01 Init - 147273 147156  118  0  1   40   95    78 0.530   4.06
 3.00 Prom - 147959 147920   40                              -3.26

 4.03 PlyA - 149023 149018    6                               1.05
 4.02 Term - 167139 166928  212  1  2   83   49   121 0.933   5.16
 4.01 Init - 171194 171047  148  2  1  103   82    54 0.877   6.55
 4.00 Prom - 171723 171684   40                              -7.86

 5.00 Prom + 180931 180970   40                              -2.36
 5.01 Init + 190943 190951    9  1  0  111   90     0 0.590   3.00
 5.02 Intr + 192425 192610  186  1  0  -41   69   150 0.006   0.09
 5.03 Intr + 207522 207590   69  2  0   44   99    52 0.351   1.28
 5.04 Intr + 209168 209215   48  1  0   82   96    15 0.348   0.58
 5.05 Intr + 209569 209631   63  0  0  108   87    10 0.460   1.81
 5.06 Intr + 227578 227713  136  0  1  122  101    87 0.587  13.54
 5.07 Intr + 263685 263826  142  1  1   96   96   139 0.864  14.91
 5.08 Intr + 305467 305681  215  1  2  126   77    26 0.010   3.66
 5.09 Intr + 322003 322179  177  2  0   96   78   235 0.947  23.19
 5.10 Intr + 340768 341003  236  2  2  101  103   126 0.960  12.81
 5.11 Intr + 349593 350631 1039  2  1  118   82  1392 0.982 131.67
 5.12 Intr + 354368 354870  503  0  2   99   97  1015 0.986  96.20
 5.13 Intr + 357961 358053   93  0  0  109   78    33 0.948   4.56
 5.14 Intr + 360597 360715  119  2  2  108   76   155 0.999  15.56
 5.15 Intr + 360807 360877   71  0  2  132  107    40 0.996   9.13
 5.16 Intr + 361801 361915  115  2  1  107   97   -15 0.882   0.81
 5.17 Intr + 364757 364862  106  2  1   61   74   192 0.999  15.32
 5.18 Intr + 365669 365851  183  1  0   79  105   208 0.998  21.58
 5.19 Intr + 366376 366506  131  0  2   73   92    83 0.999   6.69
 5.20 Intr + 366700 366883  184  1  1   66   89   209 0.980  18.59
 5.21 Intr + 370622 370729  108  1  0  134   78   196 0.735  23.68
 5.22 Term + 373530 373712  183  2  0   88   49   116 0.978   5.24
 5.23 PlyA + 375070 375075    6                               1.05

 6.06 PlyA - 375366 375361    6                               1.05
 6.05 Term - 376680 376436  245  1  2  109   32   229 0.966  15.46
 6.04 Intr - 378130 377987  144  2  0   89   63   273 0.577  25.15
 6.03 Intr - 381636 381542   95  2  2   67   92    21 0.298   0.01
 6.02 Intr - 386856 386652  205  1  1  107   -5   316 0.170  22.46
 6.01 Init - 387218 387158   61  2  1   43   61    39 0.321  -1.89
 6.00 Prom - 389098 389059   40                              -4.26

 7.00 Prom + 397292 397331   40                              -5.06
 7.01 Init + 399444 399510   67  2  1   98   36    61 0.737   3.21
 7.02 Term + 405063 405268  206  1  2  117   36    75 0.249   2.73
 7.03 PlyA + 405633 405638    6                               1.05

 8.00 Prom + 407100 407139   40                              -4.46
 8.01 Init + 412507 412795  289  0  1   64  115   380 0.937  35.58
 8.02 Term + 420495 420523   29  1  2  108   54    25 0.617  -0.66
 8.03 PlyA + 421248 421253    6                               1.05

 9.00 Prom + 434093 434132   40                              -2.66
 9.01 Init + 434382 434478   97  2  1   67   81    94 0.910   7.07
 9.02 Intr + 458024 458042   19  0  1  108   99     4 0.177  -0.83
 9.03 Term + 464354 464504  151  2  1   29   48   197 0.858   7.18
 9.04 PlyA + 465706 465711    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 203088 202981  108  0  0   81   41    86 0.921   1.71
S.002 Init - 204081 204034   48  0  0   45   57    71 0.894   0.65
S.003 Init + 317080 317128   49  0  1   88   58    77 0.869   3.81


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:15146540_15620248|GENSCAN_predicted_peptide_1|146_aa
MGFHRVAQADLELLTSGFVPLGKISSYGKTSLAGERQEVRRQPFLAKAMDWNTYKWFFHV
DLGFLKHGVCVPKDKRIPGYLFWVKGCFGDTNSINWAPGLTFKNINSNTQSAKSITVTNH
ALYTDARRCPEVTPAARHKQQAPPIN

>gi568815592f:15146540_15620248|GENSCAN_predicted_CDS_1|441_bp
atggggtttcaccgtgttgcccaggctgatctcgaactcctgacctcaggcttcgtccct
ttagggaaaatctccagctatgggaaaacctccctagctggggagaggcaggaagtaaga
aggcaacccttcttagctaaggctatggattggaacacctacaagtggtttttccacgtg
gacctgggctttctcaaacatggtgtctgtgttccaaaggataagagaattccaggttac
ctgttttgggtcaaaggatgctttggagatacaaactctatcaactgggcccctggtctc
accttcaaaaatatcaattcaaacactcagagtgccaaaagcataactgtgaccaatcac
gctctgtacacagacgcgaggcgctgtcctgaggtgacaccggctgcacggcacaagcag
caggcgccgccgatcaactag

>gi568815592f:15146540_15620248|GENSCAN_predicted_peptide_2|74_aa
MPPIGRARAPARPAPAQPAATPAGRPFRSRLEDVGNTGSAPGALTRAVPPAAAASHGLAA
GRPDSETRSAERPQ

>gi568815592f:15146540_15620248|GENSCAN_predicted_CDS_2|225_bp
atgccccctataggccgcgcgcgcgcgcccgcccgcccagccccggcccagcctgccgcg
acccccgcgggccgtccctttcgcagccggctcgaggacgtcgggaacaccggctctgct
cccggtgcattaactcgtgccgtgcctcccgcagccgccgccagccacgggcttgcagcc
ggacgcccggactcggagacacgatccgctgaacgcccgcaataa

>gi568815592f:15146540_15620248|GENSCAN_predicted_peptide_3|129_aa
MTYPLKQNNKRAQIDSETGRHIPTESEKSGTGCEDSSSSGQDKVFQLIPVFATDPKSQLF
HVQEGFSTLEPEPRNILQGEIKQLFLLPTHLLHWSEVVTPSHRDGERGNYLTTGKHFEAT
KDMMVQHIF

>gi568815592f:15146540_15620248|GENSCAN_predicted_CDS_3|390_bp
atgacatacccacttaagcagaacaacaaaagagcacaaattgattctgaaacagggaga
cacattcccacagaaagtgagaaatccggcacaggctgtgaggactcttcatcttctggt
caggacaaagttttccagctcattcctgtctttgctactgaccccaagagccaactgttc
catgttcaagagggtttctccactcttgaacctgagcccagaaacattttgcaaggagag
atcaaacagctcttcctgctgcccacacaccttctccactggtccgaggttgtcacccca
agtcacagagatggagaaaggggcaactacctcaccactggcaagcattttgaggccacc
aaagacatgatggttcagcacatcttttga

>gi568815592f:15146540_15620248|GENSCAN_predicted_peptide_4|119_aa
MAFSEIQNSQQEKLQLKLKKDTSEPAPPRRKRVPSGSGLWTHQLHGKHSDLQVKTLMPQE
TYTISESVRHTANSTVLSRTACCRGTNSLRRCEQQPWLGSVLAADFPEKLALFKMGSHQ

>gi568815592f:15146540_15620248|GENSCAN_predicted_CDS_4|360_bp
atggcattttctgagattcaaaattctcaacaagagaaactccaactaaaactcaaaaaa
gatacttcagaaccagcacctccgagacgcaagagggtaccttctggcagtggactatgg
acccatcagttacacggcaagcattcagatttgcaagtcaaaacactaatgccacaagaa
acatacaccatttctgaatctgtacggcacactgcaaattccacagtgctctcaaggaca
gcatgctgccgcggcaccaacagcctgcgtagatgtgaacagcaaccctggctcggctca
gtgttggcagcagacttcccagaaaagctggcactcttcaaaatgggaagtcaccagtga

>gi568815592f:15146540_15620248|GENSCAN_predicted_peptide_5|1371_aa
MGETLTNTEKQAALQAAERFGDELYVTYSIREGGKHYPTGRAVLMDDLKWDPSDEVEDGK
RRHFQVYLSKRDFAAGIDQGSSDEKSIQAETILVPRSPEEVGPQLCFQGSSTLPHEIFFT
AEYPIDDSDGIPWSEERVVRKVLYLSLKEFKNSQKRQHAEGIAGSLKTVNGLLGNDQSKG
LGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQSQPNSPSTTPV
KIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGKTLQPSAEVYVESTCSPALPNSMVY
FGSSQDEEEVEEEDDETEDVKTATNNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSTREK
EPVQKHKSKEATPAKEKHSDHRADSRREQASANHPAAAPSTGSSAKGLAATHHHPPLHRS
AQDLRKQVSKVNGVTRMSSLGAGVTSAKKMREVRPSPSKTVKYTATVTKGAVTYTKAKRE
LVKDTKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGPAVNGLKVSGRLNP
KSCTKEVGGRQLREGLQLREGLRNSKRRLEEAHQAEKPQSPPKKMKGAAGPAEGPGKKAP
AERGLLNGHVKKEVPERSLERNRPKRATAGKSTPGRQAHGKADSASCENRSTSQPESVHK
PQDSGKAEKGGGKAGWAAMDEIPVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPPPDW
RPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLKSQGITMDELPLIGGCELDL
ACFFRLINEMGGMQQVTDLKKWNKLADMLRIPRTAQDRLAKLQEAYCQYLLSYDSLSPEE
HRRLEKEVLMEKEILEKRKGPLEGHTENDHHKFHPLPRFEPKNGLIHGVAPRNGFRSKLK
EVGQAQLKTGRRRLFAQEKEVVKEEEEDKGVLNDFHKCIYKGRSVSLTTFYRTARNIMSM
CFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVL
PNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAE
EENKLEDVVHTLLQANGTPGLQMLESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPGSF
VSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENG
PTLSTISALLDELRDTELRQRRQLFEAGLHSSARYGSHDGSSTVADGKKKPRKWLQLETS
ERRCQICQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEEQIISLVNQ
ICGKVSGKNGSIENCLSKPTPKRGPRKRATVDVPPSRLSASSSSKSASSSS

>gi568815592f:15146540_15620248|GENSCAN_predicted_CDS_5|4116_bp
atgggggagaccttgacgaacactgagaagcaggctgctctgcaagcagcagagagattt
ggggatgagctttacgtcacatacagcatcagggaagggggcaaacattatccaactgga
agagcagtactaatggatgaccttaaatgggatcccagtgacgaggtggaagacgggaag
cggagacactttcaggtgtatctaagtaaaagggattttgcagctgggattgatcaagga
tcatcagacgagaagagtatccaggctgaaacgattctcgtgcctcggtctccagaggag
gtgggaccacagctatgttttcaaggttcatccacgctgccccatgaaatcttttttacg
gctgaatatcctattgatgacagtgatgggattccgtggtcagaagaacgggtggtacgt
aaagtcctttatttgtctctgaaggagttcaagaattcccagaagaggcagcatgcggaa
ggcattgctgggagcctgaaaactgtgaatgggctccttggtaatgaccagtctaaggga
ttaggaccagcatcagaacagtcagagaatgaaaaggacgatgcatcccaagtgtcctcc
actagcaacgatgttagttcttcagattttgaagaagggccgtcgaggaaaaggcccagg
ctgcaagcacaaaggaagtttgctcagtctcagccgaatagtcccagcacaactccagta
aagatagtggagccattgctaccccctccagctactcagatatcagacctctctaaaagg
aagcctaagacagaagattttcttacctttctctgccttcgaggtaagactttgcaacca
tcggcggaggtctacgtggaatctacatgttctcctgcgctgcccaacagcatggtgtat
tttggaagctctcaggatgaggaggaagtcgaggaggaagatgatgagacagaagacgtc
aaaacagccaccaacaatgcttcatcttcatgccagtcgacccccaggaaaggaaaaacc
cacaaacatgttcacaacgggcatgttttcaatggttccagcaggtcaacacgggagaag
gaacctgttcaaaaacacaaaagcaaagaggccactcccgcaaaggagaagcacagcgat
caccgggctgacagccgccgggagcaggcttcagctaaccaccccgcagcggccccctcc
acgggttcctcggccaaggggcttgctgccacccatcaccacccccctctgcatcggtcg
gctcaggacttacggaaacaggtttctaaggtaaacggagtcactcgaatgtcatctctg
ggtgcaggtgtaaccagtgccaaaaagatgcgcgaggtcagaccttcaccatccaaaact
gtgaagtacactgccacggtgacgaagggggctgtcacatacaccaaagccaagagagaa
ctggtcaaggacaccaaacccaatcaccacaagcccagttccgctgtcaaccacacaatc
tcagggaaaactgaaagtagcaatgcaaaaacccgcaaacaggtgctatccctcgggggg
gcgtccaagtccactgggcccgccgtcaatggcctcaaggtcagtggcaggttgaaccca
aagtcatgcactaaggaggtgggggggcggcagctgcgggagggcctgcagctgcgggag
gggctgcggaactccaagaggagactggaagaggcacaccaggcggagaagccgcagtcg
ccccccaagaagatgaaaggggcggctggccccgccgaaggccctggcaagaaggccccg
gccgagagaggtctgctgaacggacacgtgaagaaggaagtgccggagcgcagtctggag
aggaatcggccgaagcgggccacggccgggaagagcacgccaggcagacaagcacatggc
aaggcggacagcgcctcctgtgaaaatcgttctacctcgcaaccggagtccgtgcacaag
ccgcaggactcgggcaaggccgagaagggcggcggcaaggccgggtgggcggccatggac
gagatccccgtcctcaggccctccgccaaggagttccacgatccgctcatctacatcgag
tcggtccgcgctcaggtggagaagttcgggatgtgcagggtgatcccccctccggactgg
cggcccgagtgcaagctcaacgatgagatgcggtttgtcacgcagattcagcacatccac
aagctgggccggcgctggggccccaacgtgcagcggctggcctgcatcaagaagcacctc
aaatctcagggcatcaccatggacgagctcccgctcatagggggctgtgagctcgacctg
gcctgctttttccggctgattaatgagatgggcggcatgcagcaagtgactgacctcaaa
aaatggaacaaactagcagacatgctgcgcatccccagaactgcccaggaccggctggcc
aagctgcaggaggcctactgccagtacctactctcctacgactccctgtccccagaggag
caccggcggctggagaaggaggtgctgatggagaaggagatcctggagaagcgcaagggg
ccgctggaaggccacacagagaacgaccaccacaagttccaccctctgccccgcttcgag
cccaagaatgggctcatccacggcgtggcccccaggaacggcttccgcagcaagctcaag
gaggtgggccaggcccagttgaagactggccggcggcgactcttcgctcaggaaaaagaa
gtggtcaaggaagaggaggaggacaaaggcgtcctcaatgacttccacaagtgcatctat
aagggaaggtctgtttctctaacaactttttatcgaacagcgaggaatatcatgagcatg
tgtttcagcaaggagcctgccccagccgaaatcgagcaagagtactggaggctagtggaa
gagaaggactgccacgtggcagtgcactgcggcaaggtggacaccaacactcacggcagt
ggattcccagtaggaaaatcagaacccttttcgaggcatggatggaacctcaccgtcctc
cccaataacacagggtccatcctgcgtcacctcggtgctgtgcctggagtgactattccc
tggctaaatattggcatggtcttttctacctcatgctggtctcgagaccaaaatcacctt
ccatacattgactacttacacactggtgctgactgcatttggtattgcattcctgctgag
gaggagaacaagctggaagatgtggtccacaccctgctgcaagccaatggcaccccaggg
ctgcagatgctggaaagcaacgtcatgatctccccggaggtgctgtgcaaagaggggatc
aaggtgcacaggaccgtgcagcagagtggccagtttgtcgtctgcttcccgggatccttt
gtgtccaaagtgtgctgtgggtacagcgtgtctgaaaccgtgcactttgctaccacccag
tggacaagtatgggctttgagaccgccaaggaaatgaagcgtcgccatatagctaagcca
ttctccatggagaagttactctaccagattgcacaagcagaagcaaaaaaagaaaacggt
cccactctcagtaccatctcagccctcctggatgagctcagggatacagagctgcggcag
cgcaggcagctgttcgaggctggcctccactcctccgcacgctatggcagccacgatggc
agcagcacggtggcggacgggaagaaaaagcctcgaaagtggctgcagttggagacgtca
gagaggaggtgtcagatctgccagcacctgtgctacctgtccatggtggtacaagagaac
gaaaacgtcgtgttctgtctggagtgtgctctgcgccacgtggagaaacagaagtcctgc
cgagggctgaagttgatgtaccgctacgatgaggaacagattatcagtctggtcaatcag
atctgcggcaaagtgtctggtaaaaacggcagcattgagaactgtctcagtaaacccaca
ccaaaaagaggtccccgcaagagagcgacagtggacgtgcccccctcccgtctgtcagcc
tccagttcatccaaaagtgcttcgagctcatcatga

>gi568815592f:15146540_15620248|GENSCAN_predicted_peptide_6|249_aa
MEQQTPLELVEGRPEKLVLEAELDAEHAQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQY
LSTGYLQIAERRGEWGLGLLVWGLTGCAGCHDSSWGLVRWYKCYSFKFVDEPCLQFERNC
KPIGSMSSMEVNVDMLEQMDLMDISDQEALDVFLNSGGEENTVLSPALGPESSTCQNEIT
LQVPNPSELRAKPPSSSSTCTDSATRDISEGGESPVVQSDEEEVQVDTALATSHTDREAT
PDGGEDSDS

>gi568815592f:15146540_15620248|GENSCAN_predicted_CDS_6|750_bp
atggagcagcagactccactggagttagtagaaggacgacctgagaagctggtcttggaa
gctgaactagatgcagagcacgcccagaaggtcctggaaatggagcacacccagcaaatg
aagctgaaggagcggcagaagttttttgaggaagccttccagcaggacatggagcagtac
ctgtccactggctacctgcagattgcagagcggcgaggcgagtgggggctggggctgctg
gtgtggggactcaccggctgtgcgggttgccatgactcttcttggggtcttgtccgttgg
tataagtgttacagtttcaagtttgttgacgaaccttgtctacagtttgagcggaattgc
aagcccataggcagcatgtcatccatggaagtgaacgtggacatgctggagcagatggac
ctgatggacatatcggaccaggaggccctggacgtcttcctgaactctggaggagaagag
aacactgtgctgtcccccgccttagggcctgaatccagtacctgtcagaatgagattacc
ctccaggttccaaatccctcagaattaagagccaagccaccttcttcttcctccacctgc
accgactcggccacccgggacatcagtgagggtggggagtcccccgttgttcagtccgat
gaggaggaagttcaggtggacactgccctggccacatcacacactgacagagaggccact
ccggatggtggtgaggacagcgactcttaa

>gi568815592f:15146540_15620248|GENSCAN_predicted_peptide_7|90_aa
MHPGGLRFPIARRVELAEYGSEGQGDPGSLSSTLPHSWYLSIATTHLPPIVPLDATFLES
KHCVFQHGSFSACHGVGARQQSDEGTGSNH

>gi568815592f:15146540_15620248|GENSCAN_predicted_CDS_7|273_bp
atgcaccctggaggcctcagatttcccatcgccaggagggtggagctggctgaatatgga
tcggaaggccagggagacccaggctctctttcctccacgctcccacatagctggtacctc
tccattgctaccacacacttgccccctatagttccactggatgccacgttcctcgagagc
aagcactgtgtctttcaacatggaagctttagtgcctgtcatggagttggcgctcggcaa
cagtctgatgaaggtactggtagcaatcactaa

>gi568815592f:15146540_15620248|GENSCAN_predicted_peptide_8|105_aa
MGHKAVETTRNIHNAFGAGTANELTVQWWFKKFCKGDKSLEDEEHGGQPSEVDNDQLKAI
VKADPLTTTREVAKELNINHSVVIQHLKQIGRVKKHDPPNPEEFN

>gi568815592f:15146540_15620248|GENSCAN_predicted_CDS_8|318_bp
atgggtcataaagcagtggagacaactcgcaacatccacaatgcatttggcgcaggaact
gctaatgaactgacagtgcaatggtggttcaagaagttttgcaaaggagacaagagcctt
gaagatgaggagcacggtggccagccatcagaagttgacaacgaccagttgaaagcgatc
gtcaaggctgatcctcttacaactacacgagaagttgccaaagagctcaacatcaaccat
tctgtggtcattcagcatttgaagcaaattggaagggtaaaaaagcatgaccctcccaat
cctgaagagtttaactga

>gi568815592f:15146540_15620248|GENSCAN_predicted_peptide_9|88_aa
MGLDKNDQENKASTISYHEKKRSRNYNSEALEACQSLGSKVQGEAASADVKAAAAYPEDL
ATITDEGGYAKQQIVNRQNRLLLEEDDT

>gi568815592f:15146540_15620248|GENSCAN_predicted_CDS_9|267_bp
atgggtctagacaagaatgaccaggagaataaagcatctacaatcagctaccacgaaaag
aaaaggtcaaggaactacaactctgaagccttagaagcttgccagtctcttggcagcaaa
gtgcaaggtgaagcagcaagtgctgatgtaaaagctgcagcagcttatccagaagatcta
gctacgataactgatgaaggtggctatgctaaacagcagattgtcaacagacaaaataga
cttttattggaagaagatgacacctag