GENSCAN 1.0	Date run:  6-Nov-116	Time: 20:13:46

Sequence gi568815590f:37930574_38157264 : 226691 bp : 46.80% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 PlyA -   1026   1021    6                               1.05
 1.10 Term -   3913   3720  194  2  2   26   34   194 0.999   5.38
 1.09 Intr -   4642   4500  143  0  2   93   65   136 0.989  11.80
 1.08 Intr -   5296   5131  166  2  1   62   91   104 0.925   7.12
 1.07 Intr -   6297   6147  151  0  1  126   56    46 0.916   4.94
 1.06 Intr -   6813   6704  110  1  2   60   65   105 0.846   5.40
 1.05 Intr -   7176   7065  112  0  1   83   96    53 0.881   5.55
 1.04 Intr -   8261   8127  135  2  0   57   76   110 0.132   7.46
 1.03 Intr -  18215  18113  103  1  1   86   46    47 0.038   0.48
 1.02 Intr -  34011  33880  132  2  0   80   62    75 0.730   3.86
 1.01 Init -  35896  34692 1205  1  2   75   77  1603 0.921 148.44
 1.00 Prom -  43068  43029   40                              -3.76

 2.00 Prom +  45149  45188   40                              -2.86
 2.01 Init +  45983  46042   60  1  0   52   53   102 0.665   4.35
 2.02 Term +  51723  51890  168  2  0   28   47   141 0.594   1.88
 2.03 PlyA +  51950  51955    6                               1.05

 3.04 PlyA -  52966  52961    6                               1.05
 3.03 Term -  53274  53138  137  1  2   49   44   151 0.490   4.98
 3.02 Intr -  70833  70717  117  1  0   62   92    38 0.122   2.04
 3.01 Init -  71344  71293   52  1  1   63  110    34 0.189   4.44
 3.00 Prom -  89339  89300   40                              -1.96

 4.00 Prom +  94519  94558   40                              -4.26
 4.01 Init + 100001 100145  145  1  1   79   80   211 0.648  19.54
 4.02 Intr + 126508 126687  180  2  0  147  101   228 0.999  29.84
 4.03 Intr + 132558 132571   14  1  2   74   99     0 0.002  -5.80
 4.04 Intr + 141986 142090  105  1  0  116   45   107 0.392   9.61
 4.05 Intr + 142475 142523   49  1  1   82  101    56 0.352   4.55
 4.06 Term + 148384 148502  119  2  2  -24   45   123 0.050  -4.50
 4.07 PlyA + 148661 148666    6                               1.05

 5.06 PlyA - 148700 148695    6                               1.05
 5.05 Term - 154428 154267  162  0  0   26   33   137 0.067  -0.06
 5.04 Intr - 157483 157302  182  2  2   41   69   124 0.201   5.39
 5.03 Intr - 159162 158762  401  2  2   83   81   170 0.222   9.95
 5.02 Intr - 167687 167497  191  2  2   29  110    47 0.001  -0.62
 5.01 Init - 170538 170536    3  0  0   97   81     0 0.003   0.20
 5.00 Prom - 171837 171798   40                              -6.16

 6.00 Prom + 172636 172675   40                              -4.96
 6.01 Init + 174978 175165  188  2  2  104   94   111 0.875   9.84
 6.02 Intr + 175805 175871   67  2  1   70   94    57 0.931   3.41
 6.03 Intr + 176448 176593  146  2  2   57   80   132 0.876   8.38
 6.04 Intr + 179806 179894   89  1  2   70   71    47 0.885   0.81
 6.05 Intr + 180166 180260   95  2  2   93   75    72 0.929   6.08
 6.06 Intr + 184332 184427   96  2  0   61   88    88 0.987   6.31
 6.07 Intr + 186077 186152   76  1  1   80  115    43 0.999   5.29
 6.08 Intr + 188697 188790   94  1  1   67   59   140 0.985   8.02
 6.09 Intr + 190359 190576  218  0  2  106   87   115 0.997  11.35
 6.10 Intr + 197718 197885  168  1  0   87   87   152 0.979  14.92
 6.11 Intr + 198185 198378  194  0  2   74  113   144 0.998  14.71
 6.12 Intr + 202881 202973   93  2  0   73  105    48 0.960   5.16
 6.13 Intr + 205095 205193   99  2  0   71  100    26 0.822   2.41
 6.14 Term + 208391 208498  108  1  0  107   47    61 0.964   2.41
 6.15 PlyA + 209108 209113    6                               1.05

 7.08 PlyA - 211195 211190    6                               1.05
 7.07 Term - 213813 213700  114  0  0   64   49   162 0.951   8.47
 7.06 Intr - 214742 214649   94  1  1   90   67    27 0.460   0.77
 7.05 Intr - 215574 215390  185  0  2   50   90   236 0.995  18.59
 7.04 Intr - 215874 215716  159  0  0  104  105   313 0.849  34.78
 7.03 Intr - 217754 217627  128  0  2   58  111   143 0.998  14.00
 7.02 Intr - 218181 218068  114  1  0   72  123    80 0.350  10.32
 7.01 Init - 220245 220182   64  0  1   68   84    55 0.272   4.41

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 163182 163317  136  2  1   59   38   121 0.811   4.50


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:37930574_38157264|GENSCAN_predicted_peptide_1|816_aa
MAPWPHENSSLAPWPDLPTLAPNTANTSGLPGVPWEAALAGALLALAVLATVGGNLLVIV
AIAWTPRLQTMTNVFVTSLAAADLVMGLLVVPPAATLALTGHWPLGATGCELWTSVDVLC
VTASIETLCALAVDRYLAVTNPLRYGALVTKRCARTAVVLVWVVSAAVSFAPIMSQWWRV
GADAEAQRCHSNPRCCAFASNMPYVLLSSSVSFYLPLLVMLFVYARVFVVATRQLRLLRG
ELGRFPPEESPPAPSRSLAPAPVGTCAPPEGVPACGRRPARLLPLREHRALCTLGLIMGT
FTLCWLPFFLANVLRALGGPSLVPGPAFLALNWLGYANSAFNPLIYCRSPDFRSAFRRLL
CRCGRRLPPEPCAAARPALFPSGVPAARSSPAQPRLCQRLDGPGSDLKAGLVPPHPPPKP
SASVLGFLKGLTAVEVRIHFRYEVQLLLALYTTGGHGPIKTHLAATHRGSSYTEAIPFGL
KTRLQISQDPSLNYEYLPTMGLKSFIQASLALLFGKHSQAIVENRVGGVHTVGDSGAFQL
GVQFLRAWHKDARIVYIISSQKELHGLVFQDMGFTVYEYSVWDPKKLCMDPDILLNVVES
KQIFPFFDIPCQGLYTSDLEEDTRILQYFVSQGFEFFCSQSLSKNFGIYDEGVGMLVVVA
VNNQQLLCVLSQLEGLAQALWLNPPNTGARVITSILCNPALLGEWKQSLKEVVENIMLTK
EKVKEKLQLLGTPGSWGHITEQSGTHGYLGLNSQQVEYLVRKKHIYIPKNGQINFSCINA
NNINYITEGINEAVLLTESSEMCLPKEKKTLIGIKL

>gi568815590f:37930574_38157264|GENSCAN_predicted_CDS_1|2451_bp
atggctccgtggcctcacgagaacagctctcttgccccatggccggacctccccaccctg
gcgcccaataccgccaacaccagtgggctgccaggggttccgtgggaggcggccctagcc
ggggccctgctggcgctggcggtgctggccaccgtgggaggcaacctgctggtcatcgtg
gccatcgcctggactccgagactccagaccatgaccaacgtgttcgtgacttcgctggcc
gcagccgacctggtgatgggactcctggtggtgccgccggcggccaccttggcgctgact
ggccactggccgttgggcgccactggctgcgagctgtggacctcggtggacgtgctgtgt
gtgaccgccagcatcgaaaccctgtgcgccctggccgtggaccgctacctggctgtgacc
aacccgctgcgttacggcgcactggtcaccaagcgctgcgcccggacagctgtggtcctg
gtgtgggtcgtgtcggccgcggtgtcgtttgcgcccatcatgagccagtggtggcgcgta
ggggccgacgccgaggcgcagcgctgccactccaacccgcgctgctgtgccttcgcctcc
aacatgccctacgtgctgctgtcctcctccgtctccttctaccttcctcttctcgtgatg
ctcttcgtctacgcgcgggttttcgtggtggctacgcgccagctgcgcttgctgcgcggg
gagctgggccgctttccgcccgaggagtctccgccggcgccgtcgcgctctctggccccg
gccccggtggggacgtgcgctccgcccgaaggggtgcccgcctgcggccggcggcccgcg
cgcctcctgcctctccgggaacaccgggccctgtgcaccttgggtctcatcatgggcacc
ttcactctctgctggttgcccttctttctggccaacgtgctgcgcgccctggggggcccc
tctctagtcccgggcccggctttccttgccctgaactggctaggttatgccaattctgcc
ttcaacccgctcatctactgccgcagcccggactttcgcagcgccttccgccgtcttctg
tgccgctgcggccgtcgcctgcctccggagccctgcgccgccgcccgcccggccctcttc
ccctcgggcgttcctgcggcccggagcagcccagcgcagcccaggctttgccaacggctc
gacggacctggctcggacttgaaggcagggctagtgcccccccacccgccccccaagccc
tcggcctcagttctgggttttctcaaaggtttgacagctgtggaggtgagaatccacttc
cggtatgaagtacagttactgttggctctgtacaccactggaggacatgggcccatcaaa
acacacctggctgcaacacacagaggcagtagctacacagaagccataccttttggcctg
aagactcgactacagatttcacaggatccctccctgaattatgagtacttgcccaccatg
ggcctgaaatcattcatccaggcctctctagcactcctctttggaaagcacagccaagcc
attgtggagaacagggtagggggtgtacacactgttggtgacagtggtgccttccagctt
ggcgtccagtttctcagagcttggcataaggatgctcgtatagtttacatcatctcttct
caaaaagaactgcatggactcgtcttccaggacatgggctttacagtttatgaatactct
gtctgggaccccaagaagctatgcatggaccccgacatactcctcaatgtggtggagagc
aagcagatattcccattttttgatattccctgtcaaggtttatacaccagtgacttggaa
gaagatactagaatcttacaatactttgtgtctcaaggctttgagttcttctgcagccag
tctctgtccaagaattttggcatttatgatgaaggagtggggatgctagtggtggtggca
gtcaacaaccagcagctgctgtgtgtcctctcccagctggaaggattagcccaggccctg
tggctaaacccccccaacacgggtgcacgtgtcatcacctccatcctctgcaaccctgct
ctgctgggagaatggaagcagagtctaaaagaagttgtagagaacatcatgctaaccaag
gaaaaagtgaaggagaaactccagctcctgggaacccctgggtcctggggtcacatcacc
gagcagagtgggacccacggctatcttggactcaactcccagcaggtggaatacctggtc
aggaagaagcacatctatatccccaagaacggtcagattaacttcagctgtatcaatgcc
aacaacataaattacatcactgagggcatcaatgaggctgtcctcctcacagagagctca
gagatgtgtcttccaaaggaaaaaaaaacactgattggaataaaactttag

>gi568815590f:37930574_38157264|GENSCAN_predicted_peptide_2|75_aa
MKRQTPWLQKAPTLVQKRNQLTIKQPEAGPSGGIPEEGIAITGDGSSMRVIAPKDLPVGQ
DVEVEDSDIEDPDPG

>gi568815590f:37930574_38157264|GENSCAN_predicted_CDS_2|228_bp
atgaagcgccagaccccatggctgcagaaagctccaaccctggtgcagaagcggaaccag
ttaactataaaacagcctgaggcaggtccttcaggaggtattccagaagaaggcattgct
atcacaggagacggtagctccatgcgtgttatcgctcctaaagaccttccagtaggacaa
gatgtggaggtggaagacagtgatattgaggatcctgaccctgggtag

>gi568815590f:37930574_38157264|GENSCAN_predicted_peptide_3|101_aa
METSWTITDALVTPTVEGFKGTKACYHSPATAWASKAYKLSLQLPFYLSKNRTSLTAEHS
SALPLKVIYDVMRVAAINIAATDWAGPKISSTVPESMLAKD

>gi568815590f:37930574_38157264|GENSCAN_predicted_CDS_3|306_bp
atggaaacctcctggaccatcacagatgctttggtaactcctacagtggagggatttaag
gggactaaagcctgttatcactcgcctgctacagcatgggcttctaaagcctataaactc
tccttacaactcccattttacctgtccaaaaaccggacaagtcttacagctgagcattcc
tccgcactaccgttaaaagtcatctatgatgtcatgagggtggcggccatcaacattgca
gccacagactgggcaggccccaaaatctcttcaacggttccagagagtatgctggctaaa
gattga

>gi568815590f:37930574_38157264|GENSCAN_predicted_peptide_4|203_aa
MSGGSSCSQTPSRAIPATRRVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRKFLM
ECRNSPVTKTPPRDLPTIPGVTSPSSDEPPMEASQSHLRNSPEDKRAGGSKRQIFGFLVL
HSFIHTLSASTMIHRLQVPAEKPTYHILHSAGTLTRDIRYGLTHEMKAQKLQQRLNDCSI
EMNYRIIIFIMTLTNTESFVLLN

>gi568815590f:37930574_38157264|GENSCAN_predicted_CDS_4|612_bp
atgtccgggggcagcagctgcagccagaccccaagccgggccatccccgccactcgccgg
gtggtgctcggcgacggcgtgcagctcccgcccggggactacagcacgacccccggcggc
acgctcttcagcaccaccccgggaggtaccaggatcatctatgaccggaaattcctgatg
gagtgtcggaactcacctgtgaccaaaacacccccaagggatctgcccaccattccgggg
gtcaccagcccttccagtgatgagccccccatggaagccagccagagccacctgcgcaat
agcccagaagataagcgggcgggcgggtctaagagacagatatttgggtttcttgtacta
cacagcttcattcatactctaagtgccagcaccatgattcatcgcctgcaggttccagca
gaaaaacccacctaccacatcctgcattctgcagggactctcacaagagacattcgctat
ggcctaacccatgaaatgaaggcccagaagcttcagcagagactgaatgactgctccatt
gagatgaactaccgcataattatcttcatcatgactttaacaaacacagaaagctttgtt
ttgcttaattga

>gi568815590f:37930574_38157264|GENSCAN_predicted_peptide_5|312_aa
MCYYREQETKGKYWTLEGLAELGGCTPAGAWISVFTLCSICTKLRKSHSKDERKHASEVL
VLPGRHFQLEEHTLSYMEKPQALIDLMQSIFLTHNPTWADCKQLLLSLFNTEEHRRVIQA
AHQRLEKNAPVGTGDVRQCARQALPIETDPGWDPNQAQDLLKLLRYQEALIQGIKTEGKK
ATNTGKVSEVYQKPDESPMLKPSGDYQPVQDLRAVNQVAAILHAIVPNPYTVLGQIPASA
AWFTCLDIKDAFFCILLAPSTKTCSLSSRPMDESARSRSSNSTDLAEEPRRSRKRQLPCY
DHTRGWSVNARL

>gi568815590f:37930574_38157264|GENSCAN_predicted_CDS_5|939_bp
atgtgttattatagggaacaggagaccaagggaaaatactggacactggaaggcctggct
gagcttggaggatgcacacctgctggggcatggatttctgtcttcacactttgctccatc
tgcacaaagctacgtaagagtcacagcaaagatgaacggaaacatgcatctgaggttttg
gttttgccaggcagacattttcaactggaagagcatactctctcctatatggaaaaaccc
caggctcttatcgacctaatgcagtccatcttcttaactcacaacccaacctgggctgac
tgcaaacagctccttctgtcactgttcaatacagaagaacaccgcagagtaatacaagcg
gctcatcagaggctagaaaaaaatgccccagtaggtacaggagatgtcagacagtgtgct
cggcaggctttgccaatagaaactgacccaggctgggacccaaatcaggcccaagatctg
ctgaagttgctgagataccaagaggctctaatacaaggaataaagactgaagggaagaag
gcaacaaacactggaaaggtttcagaagtctatcagaaaccagatgaaagccccatgtta
aaaccttctggtgactaccagcctgtacaagatttaagggcagtcaaccaggtagctgct
atactgcatgctattgtgcctaacccgtacactgtgcttggacaaatacctgctagtgct
gcttggttcacatgcttggacattaaagatgcattcttctgcatcctgttagccccttca
actaaaacctgcagcctcagttcaagaccaatggacgagtcagcaagatccagatcatcc
aactcgactgatcttgcagaggaaccaaggcgcagcaggaaaagacaactgccctgctac
gaccacaccagaggctggtcggtcaacgcacggctgtag

>gi568815590f:37930574_38157264|GENSCAN_predicted_peptide_6|576_aa
MAAAGAGPGQEAGAGPGPGAVANATGAEEGEMKPVAAGAAAPPGEGISAAPTVEPSSGEA
EGGEANLVDVSGGLETESSNGKDTLEGAGDTSEVMDTQAGSVDEENGRQLGEVELQCGIC
TKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSGNTYFLRKQANLKEMCLSALANLTWQS
RTQDEHPKTMFSKDKSKERDVFLVKEHPDPGSKDPEEDYPKFGLLDQDLSNIGPAYDNQK
QSSAVSTSGNLNGGIAAGSSGKGRGAKRKQQDGGTTGTTKKARSDPLFSAQRLPPHGYPL
EHPFNKDGYRYILAEPDPHAPDPEKLELDCWAGKPIPGDLYRACLYERVLLALHDRAPQL
KISDDRLTVVGEKGYSMVRASHGVRKGAWYFEITVDEMPPDTAARLGWSQPLGNLQAPLG
YDKFSYSWRSKKGTKFHQSIGKHYSSGYGQGDVLGFYINLPEDTETAKSLPDTYKDKALI
KFKSYLYFEEKDFVDKAEKSLKQTPHSEIIFYKNGVNQGVAYKDIFEGVYFPAISLYKSC
TMSDMGWGAVVEHTLADVLYHVETEVDGRRSPPWEP

>gi568815590f:37930574_38157264|GENSCAN_predicted_CDS_6|1731_bp
atggcggcggcaggagcaggacctggccaggaagcgggtgccgggcctggcccaggagcg
gtcgcaaatgcaacaggggcagaagagggggagatgaagccggtggcagcgggagcagcc
gctcctcctggagaggggatctctgctgctccgacagttgagcccagttccggggaggct
gaaggcggggaggcaaacttggtcgatgtaagcggtggcttggagacagaatcatctaat
ggaaaagatacactagaaggtgctggggatacatcagaggtgatggatactcaggcgggc
tccgtggatgaagagaatggccgacagttgggtgaggtagagctgcaatgtgggatttgt
acaaaatggttcacggctgacacatttggcatagatacctcatcctgtctacctttcatg
accaactacagttttcattgcaacgtctgccatcacagtgggaatacctatttcctccgg
aagcaagcaaacttgaaggaaatgtgccttagtgctttggccaacctgacatggcagtcc
cgaacacaggatgaacatccgaagacaatgttctccaaagataagagtaaagaaagagat
gtattcttggtaaaggaacacccagatccaggcagtaaagatccagaagaagattacccc
aaatttggacttttggatcaggaccttagtaacattggtcctgcttatgacaaccaaaaa
cagagcagtgctgtgtctactagtgggaatttaaatgggggaattgcagcaggaagcagc
ggaaaaggacgaggagccaagcgcaaacagcaggatggagggaccacagggaccaccaag
aaggcccggagtgaccctttgttttctgctcagcgccttccccctcatggctacccattg
gaacacccgtttaacaaagatggctatcggtatattctagctgagcctgatccgcacgcc
cctgaccccgagaagctggaacttgactgctgggcaggaaaacctattcctggagacctc
tacagagcctgcttgtatgaacgggttttgttagccctacatgatcgagctccccagtta
aagatctcagatgaccggctgactgtggttggagagaagggctactctatggtgagggcc
tctcatggagtacggaaaggtgcctggtattttgaaatcactgtggatgagatgccacca
gataccgctgccagactgggttggtcccagcccctaggaaaccttcaagctcctttaggt
tatgataaatttagctattcttggcggagcaaaaagggaaccaagttccaccagtccatt
ggcaaacactactcttctggctatggacagggagacgtcctgggattttatattaatctt
cctgaagacacagagacagccaagtcattgccagacacatacaaagataaggctttgata
aaattcaagagttatttgtattttgaggaaaaagactttgtggataaagcagagaagagc
ctgaagcagactccccatagtgagataatattttataaaaatggtgtcaatcaaggtgtg
gcttacaaagatatttttgagggggtttacttcccagccatctcactgtacaagagctgc
acgatgagtgacatgggctggggcgccgtggtagagcacaccctggctgacgtcttgtat
cacgtggagacagaagtggatgggaggcgcagtcccccatgggaaccctga

>gi568815590f:37930574_38157264|GENSCAN_predicted_peptide_7|285_aa
MLLATFKLCAGSSYRHMRNMKGLRQQAVMAISQELNRRALGGPTPSTWINQVRRRSSLLG
SRLEETLYSDQELAYLQQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDVGKVF
RLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVG
PRDFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLT
WLLSIDLKGWLPKSIINQVLSQTQVDFANHLRKRLESHPASEARC

>gi568815590f:37930574_38157264|GENSCAN_predicted_CDS_7|858_bp
atgctgctagcgacattcaagctgtgcgctgggagctcctacagacacatgcgcaacatg
aaggggctgaggcaacaggctgtgatggccatcagccaggagctgaaccggagggccctg
gggggccccacccctagcacgtggattaaccaggttcggcggcggagctctctactcggt
tctcggctggaagagactctctacagtgaccaggagctggcctatctccagcagggggag
gaggccatgcagaaggccttgggcatccttagcaaccaagagggctggaagaaggagagt
cagcaggacaatggggacaaagtgatgagtaaagtggtcccagatgtgggcaaggtgttc
cggctggaggtcgtggtggaccagcccatggagaggctctatgaagagctcgtggagcgc
atggaagcaatgggggagtggaaccccaatgtcaaggagatcaaggtcctgcagaagatc
ggaaaagatacattcattactcacgagctggctgccgaggcagcaggaaacctggtgggg
ccccgtgactttgtgagcgtgcgctgtgccaagcgccgaggctccacctgtgtgctggct
ggcatggccacagacttcgggaacatgcctgagcagaagggtgtcatcagggcggagcac
ggtcccacttgcatggtgcttcacccgttggctggaagtccctctaagaccaaacttacg
tggctactcagcatcgacctcaaggggtggctgcccaagagcatcatcaaccaggtcctg
tcccagacccaggtggattttgccaaccacctgcgcaagcgcctggagtcccaccctgcc
tctgaagccaggtgttga