GENSCAN 1.0	Date run:  6-Nov-116	Time: 20:14:18

Sequence gi568815584r:95611758_95814066 : 202309 bp : 45.25% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    201    196    6                               1.05
 1.03 Term -   9337   9152  186  1  0  105   53   182 0.961  13.89
 1.02 Intr -  19667  19638   30  2  0  116   89    -2 0.593   1.03
 1.01 Init -  20692  20540  153  1  0   60   94   129 0.386   8.72
 1.00 Prom -  25343  25304   40                              -4.96

 2.00 Prom +  28684  28723   40                               1.04
 2.01 Init +  40395  40469   75  2  0   49  101    45 0.105   2.99
 2.02 Term +  50224  50379  156  0  0   25   37   140 0.150   0.53
 2.03 PlyA +  50499  50504    6                               1.05

 3.03 PlyA -  50732  50727    6                               1.05
 3.02 Term -  58800  58698  103  2  1  112   35    86 0.967   3.45
 3.01 Init -  59078  58993   86  2  2   97   92    66 0.991   8.19
 3.00 Prom -  62032  61993   40                              -7.06

 4.07 PlyA -  62785  62780    6                               1.05
 4.06 Term -  68180  68079  102  2  0   40   44    84 0.250  -2.52
 4.05 Intr -  68860  68716  145  0  1   20   93   106 0.381   4.58
 4.04 Intr -  72559  72306  254  1  2   54   44   189 0.387   7.33
 4.03 Intr -  73982  73786  197  0  2   35   69    85 0.678   0.43
 4.02 Intr -  75096  74987  110  2  2   58   81    63 0.365   2.53
 4.01 Init -  80073  80012   62  0  2   49   52   130 0.679   4.22
 4.00 Prom -  88951  88912   40                              -2.86

 5.05 PlyA -  93914  93909    6                               1.05
 5.04 Term - 100045  99998   48  1  0  117   41   120 0.993   7.50
 5.03 Intr - 100639 100463  177  1  0  118  113   138 0.997  19.42
 5.02 Intr - 102325 102190  136  0  1   61   77   251 0.902  21.87
 5.01 Init - 107295 107237   59  0  2   54   98    33 0.578   1.68
 5.00 Prom - 115869 115830   40                              -4.26

 6.10 PlyA - 115970 115965    6                               1.05
 6.09 Term - 129476 129367  110  0  2   95   46    41 0.258  -0.73
 6.08 Intr - 130798 130680  119  0  2  111   43    71 0.273   5.01
 6.07 Intr - 131077 131034   44  1  2   67   77    37 0.259  -2.46
 6.06 Intr - 131469 131443   27  0  0   62  115    20 0.065   0.41
 6.05 Intr - 152306 152127  180  2  0   46   37   103 0.082   1.06
 6.04 Intr - 157405 157273  133  0  1   90   87    80 0.840   8.75
 6.03 Intr - 159939 159843   97  1  1   65   82   112 0.893   7.37
 6.02 Intr - 174334 174094  241  1  1  117   64    28 0.004   0.42
 6.01 Init - 175401 175330   72  0  0   78   73    59 0.008   2.60
 6.00 Prom - 185125 185086   40                              -2.56

 7.00 Prom + 189299 189338   40                              -4.06
 7.01 Init + 191699 191824  126  1  0   33  110    86 0.589   3.53
 7.02 Term + 195599 195727  129  1  0  101   47    75 0.837   2.88
 7.03 PlyA + 196528 196533    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 175276 175392  117  0  0   48   71   118 0.931   6.30


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:95611758_95814066|GENSCAN_predicted_peptide_1|122_aa
MAASASAQPCSLPCTAAGVAHNSPNMLPARNLPFRVHWLGIESVMAADPGQRPCGYTRPT
QNPAPGPISTKLHSFKHFQKLPEYDAADGEQVPSGVMRQNPGYVFLAGSIRLPRSHFRRL
TS

>gi568815584r:95611758_95814066|GENSCAN_predicted_CDS_1|369_bp
atggcagcctctgcctctgcccagccctgctccctgccctgcaccgctgcaggtgttgct
cacaatagccccaatatgcttcctgcacgcaacctccctttcagagtccactggctggga
atcgaatctgtgatggccgccgacccagggcagagaccctgtggttacaccaggcccacc
cagaacccagccccaggtccaatttccacaaaactccactctttcaagcatttccagaag
ttaccggagtatgatgctgctgatggggagcaggtgccgtcgggggtcatgcgacagaac
cctggctatgtgtttctcgctggctccatccgcttgccgcgctcccacttccgccgactc
acttcctga

>gi568815584r:95611758_95814066|GENSCAN_predicted_peptide_2|76_aa
MKINSEEERGLPWNASVIYDILHNNILCIRQKQVEVTEGECGRSWWVNDRQRCPVKSTTC
DKGGFSLLLNKHAILQ

>gi568815584r:95611758_95814066|GENSCAN_predicted_CDS_2|231_bp
atgaagatcaacagtgaagaggaaaggggtcttccctggaacgcttcagtcatatacgac
attttacacaacaatatactttgcatccggcaaaaacaggtggaggtgactgaaggcgaa
tgtgggaggtcatggtgggttaatgatcgccagcgctgtccggtgaaatcaaccacctgt
gacaaaggtggtttttcacttttactgaacaagcatgctattctacagtaa

>gi568815584r:95611758_95814066|GENSCAN_predicted_peptide_3|62_aa
MDWNGGERGEKALEEGSISELIGLDSGLSFCCNSKKEKEGKKDVTRICNGSCSWPSVNVS
GM

>gi568815584r:95611758_95814066|GENSCAN_predicted_CDS_3|189_bp
atggactggaatggtggagagagaggtgagaaggcgctggaggaaggatctatttcagag
ctgataggactcgacagtgggttgagcttctgttgtaactccaagaaggagaaggaagga
aaaaaggacgtgactcgaatctgcaatggcagctgctcttggcccagtgtgaatgtgtct
gggatgtaa

>gi568815584r:95611758_95814066|GENSCAN_predicted_peptide_4|289_aa
MAQALPGLLQAAAHLRGALYGTTLSHVDKLVPVVPLRGVFLGPGLGMDIAALLDLHRKNK
PVHYQHLSSGSDKAHRNKATGGHVATWPAHPWPWGPECPLGLVVLLARLCQEASEAQEHS
KKQVSHPSTLGPGMKKATELQVTTVWFLVLQLVFVHVMSEISEIRLCLLAKLSISGTCDL
KDSLSGVGVTNVFENHFDLSRIAPRIAWKKQLQMPDSRGQFTCSPAFSAPAKLFSGTPPP
GEPLSSQETTGSLGNTIFHSVAVVLPERGPNPDLKRRFLDLMQEFGASP

>gi568815584r:95611758_95814066|GENSCAN_predicted_CDS_4|870_bp
atggcccaggccctgcctggcctgctccaagctgctgcccatctgagaggagccctctat
gggaccacattatctcatgtggataagcttgtgcctgtggtccctttacggggggtgttc
ctggggccagggctgggcatggacattgctgcgctcctagacctgcacagaaaaaataag
ccagtgcactatcagcatctgagctcaggatcagataaagcccacagaaacaaggccacc
ggaggccacgtggccacctggccagcccatccttggccatggggcccagagtgcccactt
ggcctggtcgtcttacttgctcgactttgtcaagaggcctcagaagctcaagaacatagc
aagaagcaggtctcccatccctcaacccttggacctggtatgaaaaaagccacggagctg
caggtgacaacagtttggttcctggtccttcagctggtctttgtccatgtcatgtctgag
ataagtgagataaggctatgtcttctggccaagttgtccatctctggtacctgtgacctg
aaggattcactctccggggtaggtgtcaccaatgtctttgagaaccactttgatctctcc
agaattgctcccaggattgcctggaaaaagcagctgcagatgcctgacagcaggggtcag
ttcacctgctctccagcgttttcagctcctgccaagctgttctcaggaactccaccccct
ggtgagcctttgtcttctcaggagaccacagggagcctgggcaacacgattttccatagc
gtggctgtagtgttaccagaaaggggtcccaatccagacctcaagagaaggttcttggac
ctcatgcaagaatttggggcaagtccatag

>gi568815584r:95611758_95814066|GENSCAN_predicted_peptide_5|139_aa
MLTLTASNQHRTGNPNQSNRRPEDAMAECPTLGEAVTDHPDRLWAWEKFVYLDEKQHAWL
PLTIEIKDRLQLRVLLRREDVVLGRPMTPTQIGPSLLPIMWQLYPDGRYRSSDSSFWRLV
YHIKIDGVEDMLLELLPDD

>gi568815584r:95611758_95814066|GENSCAN_predicted_CDS_5|420_bp
atgctcactctcactgcttctaatcagcacagaactggaaatcctaatcagagcaacagg
cggcccgaggacgccatggccgagtgcccgacactcggggaggcagtcaccgaccacccg
gaccgcctgtgggcctgggagaagttcgtgtatttggacgagaagcagcacgcctggctg
cccttaaccatcgagataaaggataggttacagttacgggtgctcttgcgtcgggaagac
gtcgtcctggggaggcctatgacccccacccagataggcccaagcctgctgcctatcatg
tggcagctctaccctgatggacgataccgatcctcagactccagtttctggcgcttagtg
taccacatcaagattgacggcgtggaggacatgcttctcgagctgctgccagatgactga

>gi568815584r:95611758_95814066|GENSCAN_predicted_peptide_6|340_aa
MPDLSVWPWASHIILLSLSFVICNVLSMGTTLSVFCLGKIPLGTVKLMGCVAGVRLHSGT
PVRAFLFTVWSMEQQYWPSLLGKQNLRTHPEQLLIESPHFNKIPDPNVAFYLIAVPEVEE
EKLPLPGVGSPTHRGLSSAAKFSCILSHVVTQDLCIPEASPQPSGYCFLTFYPAELRPLD
QWDWCLYKEYSLYYCEGSNPFSPLPPCEDAVRAAILEAKREPSSDTESAGALTLDFPASG
TCLTTVPKSMTEKGKGPGDLRANARIWCRVISSGSSRGRYGYLRAVDTVWTPYATLEGNW
TKELKGKPSSETLGALSKAPQLVEESVPHEADSTVHTFNQ

>gi568815584r:95611758_95814066|GENSCAN_predicted_CDS_6|1023_bp
atgcctgacctgtctgtatggccttgggcgagtcacatcatccttctgagcctcagcttt
gtcatctgcaatgtcttaagcatgggcacaacattgtcagttttctgccttggaaagatc
cctctggggacagtgaagttaatgggttgtgtggcaggtgtaagattacattcagggaca
ccggttagagcctttctgttcactgtgtggtccatggaacagcagtattggccctccttg
ttaggcaagcagaatctcaggacacatcctgagcaactactgattgagagtccgcatttt
aacaagatcccagaccctaatgtggccttctatctgattgctgttccagaagtggaggag
gagaagctgcccctccctggtgtaggatcacctactcaccgcgggctcagctcagcagcc
aagttcagctgcatcctgagccatgttgtcacccaggacctttgcatccctgaagccagt
ccacaaccttctggttactgtttcctaactttctatcctgctgaactgcgtccattggat
cagtgggactggtgcctgtataaagagtactctctgtactactgtgagggaagcaaccct
ttttcacccttaccgccatgtgaagatgcagtaagagccgccatcttggaagcaaagaga
gagccttcatcagacactgaatctgctggtgccttgaccttggacttcccagcctctgga
acttgcttaaccacagtgcccaaaagcatgacagaaaagggaaagggccctggggatcta
agagccaatgcaaggatctggtgcagagtaatttcttctggctcctccagaggtagatat
gggtatctgagggcagtggacacagtctggaccccttatgccacactggaaggcaactgg
accaaggagctgaaggggaaaccaagcagtgagacgttaggtgctttgtccaaggcccct
cagctagtggaggagtcagtcccacatgaagctgactccacagtccacacctttaaccaa
taa

>gi568815584r:95611758_95814066|GENSCAN_predicted_peptide_7|84_aa
MASPLSLPVTHLEMLSEAGARRTEKAIAELRSKHKRRQGKGRSTSDLTKIFLNDGVKGSV
SLNLRIDDTREVTDDKRLYQSLKP

>gi568815584r:95611758_95814066|GENSCAN_predicted_CDS_7|255_bp
atggcttccccactttcactgcctgtcactcacctggaaatgctcagtgaggctggggca
cgcagaacagaaaaggccattgcagaattacggagtaaacataaaagacgccagggaaag
gggaggtcaactagtgacctaacaaagatttttctaaatgatggggtaaagggttctgtc
tctttaaatcttcgaatagatgacaccagggaagtcactgatgacaagagactgtaccag
tctctcaagccatga