GENSCAN 1.0	Date run:  5-Nov-116	Time: 09:08:28

Sequence gi568815578f:37284154_37503376 : 219223 bp : 50.51% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   2517   2364  154  0  1  101   45   113 0.141   8.44
 1.00 Prom -   7630   7591   40                              -4.26

 2.00 Prom +   9339   9378   40                              -3.26
 2.01 Init +  17111  17260  150  1  0   92  101   233 0.996  25.04
 2.02 Intr +  29683  29776   94  0  1   19   37   134 0.019   0.94
 2.03 Intr +  32352  32517  166  1  1   77   58    45 0.048  -0.58
 2.04 Intr +  44064  44200  137  0  2   85   94    38 0.369   4.31
 2.05 Intr +  49656  49736   81  1  0   72   96    45 0.828   3.31
 2.06 Term +  49854  49996  143  1  2   52   47   117 0.839   2.09
 2.07 PlyA +  51080  51085    6                               1.05

 3.09 PlyA -  51169  51164    6                               1.05
 3.08 Term -  52170  52126   45  0  0   91   53    37 0.137  -2.29
 3.07 Intr -  59175  59086   90  0  0   49  101    80 0.316   5.59
 3.06 Intr -  69916  69812  105  1  0  125   14    35 0.193   0.21
 3.05 Intr -  72306  72027  280  2  1   99  131    70 0.662   9.88
 3.04 Intr -  73656  73519  138  2  0  126   61     0 0.557   0.68
 3.03 Intr -  79441  79229  213  0  0   72   80   128 0.720   8.23
 3.02 Intr -  80386  80181  206  1  2  137   40    57 0.871   3.80
 3.01 Init -  93495  93460   36  0  0   82   66    79 0.273   3.36
 3.00 Prom -  93723  93684   40                              -6.26

 4.00 Prom +  93755  93794   40                              -7.76
 4.01 Init + 100001 100250  250  1  1   88   77   427 0.667  39.23
 4.02 Intr + 101922 102021  100  1  1  130   94   190 0.985  22.97
 4.03 Intr + 109742 109840   99  2  0   94   64   154 0.314  12.83
 4.04 Intr + 110021 110124  104  2  2  109  102   117 0.782  15.02
 4.05 Intr + 112009 112158  150  2  0  111   55   434 0.988  42.53
 4.06 Intr + 112397 112462   66  0  0  114   63    16 0.529   0.58
 4.07 Intr + 113546 113701  156  0  0  113   82   207 0.999  22.58
 4.08 Intr + 115962 116141  180  1  0  111   96   273 0.999  30.24
 4.09 Intr + 117449 117525   77  0  2   42  109   131 0.999   9.83
 4.10 Intr + 118282 118435  154  0  1   82   86   301 0.945  28.95
 4.11 Intr + 118596 118727  132  1  0  124   99   238 0.999  29.12
 4.12 Term + 119018 119226  209  0  2  106   48   478 0.999  43.10
 4.13 PlyA + 124060 124065    6                              -0.45

 5.11 PlyA - 129667 129662    6                               1.05
 5.10 Term - 132433 132317  117  1  0   79   48    83 0.126   1.94
 5.09 Intr - 139564 139486   79  0  1   35   55   110 0.061   1.95
 5.08 Intr - 142271 142153  119  2  2   49   87    77 0.083   2.96
 5.07 Intr - 160762 160616  147  1  0   71   92   114 0.444  10.53
 5.06 Intr - 161381 160966  416  0  2   43  -73   416 0.034  14.82
 5.05 Intr - 185493 185203  291  1  0    7   81   160 0.164   4.31
 5.04 Intr - 187561 187426  136  1  1   68   65    90 0.146   4.84
 5.03 Intr - 189663 189499  165  0  0   86   47    54 0.134   1.26
 5.02 Intr - 202095 202011   85  2  1  111   30    23 0.019  -1.38
 5.01 Init - 219221 219181   41  2  2   78  100    49 0.847   4.77

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 216459 216327  133  2  1   62   38   114 0.816   1.36


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:37284154_37503376|GENSCAN_predicted_peptide_1|52_aa
MDTDAHIERTSCEDEGRYRDDASTAKEHHRLPAGHQKLVKRHGTGSSQPSEX

>gi568815578f:37284154_37503376|GENSCAN_predicted_CDS_1|156_bp
atggacacagatgcacacatagagagaacgtcatgtgaagatgaaggcagatatcgggac
gatgcctctacagccaaggaacaccacagattgccagcaggccaccagaagctagtcaag
aggcatgggacaggctcctcacagccctcagaagnn

>gi568815578f:37284154_37503376|GENSCAN_predicted_peptide_2|256_aa
MASDLDFSPPEVPEPTFLENLLRYGLFLGAIFQLICVLAIIVPIPKSHEAGQTMGAVCRV
AKETGIPVDEGDQRKLWGLTQCSGSEEAVTPYDRRDLDSRNSPQAPAGQSTTSSSFCFCD
GLESRGLKHTVSIDCIRDPESLLLCSHLVETPNLKCGTLLLKPEKDPGLWPLAKAQAVQF
SSAQAQCKGASLPHYPLLPYPGNVCGRRKGAKCTTDVTEHPQQVPPEGPAQSGCGKAKCM
TSRLEDFGPQEPWAVD

>gi568815578f:37284154_37503376|GENSCAN_predicted_CDS_2|771_bp
atggcctctgacctagacttctcacctccggaggtgcccgagcccactttcctggagaac
ctgctacggtacggactcttcctgggagccatcttccagctcatctgtgtgctggccatc
atcgtacccattcccaagtcccacgaggcgggccaaaccatgggagcagtttgccgggtg
gccaaggaaacaggtattcctgttgatgaaggtgaccagcggaagctctggggcctgact
cagtgctcagggtctgaggaggctgtgacgccctatgaccgcagagatctagacagtcgt
aacagtccccaggctccagctgggcaatccaccacttcctcttccttctgcttctgtgac
ggtttagagtcaagggggctgaaacacactgtgagcatagactgtattagggatcctgag
tctttgctcctatgtagtcacttggtagaaacgccgaacctgaaatgtggcactttgctt
ctcaagccagagaaggatccaggcttatggcccttagcaaaagcccaagcggttcagttc
agctcagcccaggcccagtgcaaaggagcctcccttcctcattacccgcttctgccctac
cccgggaacgtgtgtggacgtagaaagggtgcaaaatgcacaacggatgtcacagagcat
ccccagcaggtgcccccagagggaccagcccagagcgggtgcggaaaggccaagtgcatg
accagccgccttgaggactttggcccccaggaaccttgggctgtggactag

>gi568815578f:37284154_37503376|GENSCAN_predicted_peptide_3|370_aa
MALQLVVLPSPMTWRRESPEGSSCHALITGWTQRPNKPGAPQGGGTVGPQRITTATASPS
RCSWVAGTMLTSSVNHPNPLCSPVASCGHTRFTYKATGAPGGCPSQKADSQDTSQIRGTP
EPILPHLPCEEHSKGDPGGSLGAEAQADQGARSSGLSHLLRQALLDHLFLDTPSQLCSPS
LSSKATSSQKASLKPQSKPICSQCGHQGHLTEATLTLTQTLPRMWDTLLSSSSPSSLPEE
QAPRPSTHWHQPTDPSQDSMAPQTSKRSCSQGTFRPFVKLYLPSEVPPILPVNTNCNKIT
RTEHLLCAGIAEGVGHKTSSLQQAHGASLRTPTGTTSQPKSTQQMIDAIDVNIAEMACMS
APVLELGTDK

>gi568815578f:37284154_37503376|GENSCAN_predicted_CDS_3|1113_bp
atggccctgcagctggtggtgctgccgtctcccatgacctggagaagagaaagtccagag
gggtcctcctgccacgccctcatcacggggtggacacagaggccaaataaaccaggggcc
ccacaaggaggagggacagttggtcctcagaggataacaacagctacggcgtcaccatca
cggtgctcctgggtggcgggcaccatgcttacgagctcagtgaaccaccccaaccctctg
tgcagccctgtagcaagctgtggccacactcgttttacatacaaggccacaggggcccca
ggaggctgccccagccagaaggcagacagccaggataccagccagatccgagggacacca
gagcccatcctaccccacctcccctgtgaggagcacagcaagggcgacccaggagggagc
ctgggtgcagaggcgcaggcggaccagggtgccaggtcttcaggactcagccatctgctc
agacaggccttgctcgaccacctgtttcttgatacacccagccaactctgctctccaagt
ctcagctccaaagccacttcctcacagaaagcctccctcaaaccccagtccaagcccatc
tgttctcagtgcggccaccagggccacctcactgaagccacactgaccctgacccagaca
ctacccagaatgtgggatacattactctcatccagtagcccttcctcactgcccgaggag
caggcccccaggccctctacccattggcaccagccaactgacccaagtcaagactccatg
gctcctcagacctccaagaggagctgctcacagggcaccttcaggccctttgtcaagctc
tatctcccctcagaggtccctcccatccttccggttaatacaaattgcaataaaataaca
cgcaccgagcacttactgtgtgctggcattgctgagggcgttggacacaagacttcatcc
ttgcaacaagcccatggagccagtcttagaacaccaacaggaaccacttcccaacccaaa
agcacccagcagatgatagatgctattgacgtcaacattgctgagatggcctgcatgtca
gctcctgtgctggagctggggacagacaagtga

>gi568815578f:37284154_37503376|GENSCAN_predicted_peptide_4|558_aa
MGSNKSKPKDASQRRRSLEPAENVHGAGGGAFPASQTPSKPASADGHRGPSAAFAPAAAE
PKLFGGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETDLSFKKGERLQIVNNTEGD
WWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRES
ETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSMSHCPP
FSAAGWYGGGCPEEPQKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQ
GCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY
IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG
ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL
TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF
LEDYFTSTEPQYQPGENL

>gi568815578f:37284154_37503376|GENSCAN_predicted_CDS_4|1677_bp
atgggtagcaacaagagcaagcccaaggatgccagccagcggcgccgcagcctggagccc
gccgagaacgtgcacggcgctggcgggggcgctttccccgcctcgcagacccccagcaag
ccagcctcggccgacggccaccgcggccccagcgcggccttcgcccccgcggccgccgag
cccaagctgttcggaggcttcaactcctcggacaccgtcacctccccgcagagggcgggc
ccgctggccggtggagtgaccacctttgtggccctctatgactatgagtctaggacggag
acagacctgtccttcaagaaaggcgagcggctccagattgtcaacaacacagagggagac
tggtggctggcccactcgctcagcacaggacagacaggctacatccccagcaactacgtg
gcgccctccgactccatccaggctgaggagtggtattttggcaagatcaccagacgggag
tcagagcggttactgctcaatgcagagaacccgagagggaccttcctcgtgcgagaaagt
gagaccacgaaaggtgcctactgcctctcagtgtctgacttcgacaacgccaagggcctc
aacgtgaagcactacaagatccgcaagctggacagcggcggcttctacatcacctcccgc
acccagttcaacagcctgcagcagctggtggcctactactccatgtcccactgcccgcct
ttctctgcagctggctggtatggagggggctgccctgaggagccccagaaacacgccgat
ggcctgtgccaccgcctcaccaccgtgtgccccacgtccaagccgcagactcagggcctg
gccaaggatgcctgggagatccctcgggagtcgctgcggctggaggtcaagctgggccag
ggctgctttggcgaggtgtggatggggacctggaacggtaccaccagggtggccatcaaa
accctgaagcctggcacgatgtctccagaggccttcctgcaggaggcccaggtcatgaag
aagctgaggcatgagaagctggtgcagttgtatgctgtggtttcagaggagcccatttac
atcgtcacggagtacatgagcaaggggagtttgctggactttctcaagggggagacaggc
aagtacctgcggctgcctcagctggtggacatggctgctcagatcgcctcaggcatggcg
tacgtggagcggatgaactacgtccaccgggaccttcgtgcagccaacatcctggtggga
gagaacctggtgtgcaaagtggcggactttgggctggctcggctcattgaagacaatgag
tacacggcgcggcaaggtgccaaattccccatcaagtggacggctccagaagctgccctc
tatggccgcttcaccatcaagtcggacgtgtggtccttcgggatcctgctgactgagctc
accacaaagggacgggtgccctaccctgggatggtgaaccgcgaggtgctggaccaggtg
gagcggggctaccggatgccctgcccgccggagtgtcccgagtccctgcacgacctcatg
tgccagtgctggcggaaggagcctgaggagcggcccaccttcgagtacctgcaggccttc
ctggaggactacttcacgtccaccgagccccagtaccagcccggggagaacctctag

>gi568815578f:37284154_37503376|GENSCAN_predicted_peptide_5|531_aa
MEKKQLKAQLQSTSQTQFIPPTPTGASAPCPKVAVTKVPKGQLETPALAFTLSTWRLAFI
LAAAEFTFSDMKCKCLKCSSIFKKKMMKTNWGVKEDIVVMRVRANMQDEGDRLEDDLSLR
LQWVREGAKPFRRDIQGRPLGKDIGTGCRKTSPLRMLMKAHKGVLGEQEKVPRRLMKVLK
GVPGEQEKVLWEAREEGVSSRWTGSPMGCEQRVWMGDEQAMEPLGLADGKLWRTFMGAAD
AERKEGRGMKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGVGQDIQPKRDLTRFVKWPRYI
KLQHQRAFLYKRLKVPPAINQFTQALDRQTATQLLELAHKYRPETKQEKKQRLLAQAEEK
TAGKGDISTKRLPVLQAGVNWEDKSALAKLVEGIRTNYNERYNEIHHHWGGNVLGPESVA
RIAKLKKLRIANLALPQQLFGICLILEILHEEHVVTSFVNGHGDLGRRGAGGAIASDKND
CSAIGENVPGTGQEFVGAGLRYTLKVPDKLTQQQEGHQRGEGGSSTAQTEA

>gi568815578f:37284154_37503376|GENSCAN_predicted_CDS_5|1596_bp
atggagaagaaacagctgaaggcacagctccagagcacaagccagacccagttcattccc
ccaacaccaacaggggcttctgccccttgccccaaagttgctgtgacaaaagtccccaaa
ggccagctggagacaccggccctcgccttcaccctcagcacctggcgactggcattcatc
ctggcggctgctgaattcacattttctgacatgaaatgcaaatgtctgaaatgcagttca
atctttaaaaaaaaaatgatgaaaaccaattggggtgtcaaggaagacatagtggtcatg
cgtgtgagggcgaacatgcaggatgagggcgacaggctggaggatgacctgagcctgcgc
ttgcaatgggtgagggaaggggccaagccatttagacgggatattcagggaaggcctctt
ggaaaagacataggcactggatgcagaaagacaagcccgctaaggatgttgatgaaggcc
cacaagggggtcctaggggagcaggagaaggtaccaaggagactgatgaaggtcctcaag
ggggtcccaggagaacaggagaaggtgctctgggaagcaagggaggagggcgtttccagc
aggtggacagggtcacccatgggctgtgagcagagagtttggatgggggatgagcaagcc
atggagcccctgggcttggccgatgggaagctttggaggaccttcatgggagcagctgat
gccgaaaggaaagaaggccgggggatgaaggtggctccagcccctgctgtcgtgaagaag
caggaggccaagaaagtggtgaatcccctgtttgagaaaaggcctaagaattttggtgtt
ggacaggacatccagcccaaaagagacctcacccgttttgtgaaatggccccgctatatc
aagttgcagcatcagagagccttcctctataaacggctgaaagtgcctcctgcaattaac
cagttcacccaggccctggaccgccaaactgctactcagctgcttgagctggcccacaag
tacagaccagagacaaagcaagagaagaagcagaggctcttggcccaggccgaggagaaa
actgctggcaaaggggacatctccactaagagactacctgtccttcaagcaggagttaac
tgggaagacaaaagtgctttggctaagctggtggaaggtataaggaccaattacaatgag
agatacaatgagatccaccatcactggggaggcaatgtcctgggtcccgagtctgtggct
cgcatcgccaagctcaaaaagctacggattgcaaacctggccctgccgcaacagcttttc
ggtatttgcctaatcctcgagatactccatgaggaacatgtcgtcaccagcttcgttaac
ggacacggggacttaggaaggagaggggctgggggcgccatcgccagtgataagaatgac
tgtagtgccatcggagaaaacgttcctggcactggccaggagtttgtgggtgcagggctc
aggtacaccttgaaagttccagacaaactcactcagcagcaggaaggccaccagaggggc
gagggtgggagctccacggcacagacagaggcctga