GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:16:28

Sequence gi568815596r:130952906_131182646 : 229741 bp : 46.00% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   1173   1212   40                              -2.06
 1.01 Init +  10407  10666  260  2  2   60   43   238 0.634  11.11
 1.02 Intr +  11067  11344  278  0  2   86  107   308 0.970  29.66
 1.03 Term +  13294  13364   71  2  2   98   41    33 0.451  -2.30
 1.04 PlyA +  13400  13405    6                              -1.75

 2.02 PlyA -  13989  13984    6                              -4.83
 2.01 Sngl -  14640  14293  348  0  0   91   38   274 0.534  18.74
 2.00 Prom -  16283  16244   40                              -5.26

 3.00 Prom +  25827  25866   40                              -1.36
 3.01 Init +  38806  39010  205  0  1   97   44   152 0.098  10.98
 3.02 Intr +  75040  75179  140  2  2  105   75   179 0.119  18.48
 3.03 Term +  75563  75730  168  1  0   50   44   111 0.892   0.78
 3.04 PlyA +  76457  76462    6                               1.05

 4.00 Prom +  76503  76542   40                              -9.55
 4.01 Init +  82187  82327  141  1  0  121  -19   313 0.046  22.03
 4.02 Intr +  85640  85720   81  1  0   85   49    66 0.610   2.23
 4.03 Intr +  85948  86127  180  0  0   96   55   240 0.994  21.56
 4.04 Intr +  87111  87287  177  2  0   58   78   406 0.954  36.72
 4.05 Intr +  87356  87535  180  1  0   57   58   494 0.998  43.36
 4.06 Intr +  88325  88557  233  1  2   56   91   525 0.999  46.17
 4.07 Intr +  88910  89039  130  2  1   98   78   293 0.997  30.00
 4.08 Intr +  90547  90678  132  0  0   60   76   115 0.990   8.34
 4.09 Intr +  91006  91118  113  0  2   38   34    84 0.528  -2.82
 4.10 Intr +  91261  91637  377  1  2   54   52   453 0.526  32.96
 4.11 Intr +  92464  92541   78  2  0   72  102   127 0.992  12.02
 4.12 Term +  93133  93284  152  2  2  116   43   226 0.471  18.97
 4.13 PlyA +  94329  94334    6                               1.05

 5.06 PlyA -  94993  94988    6                               1.05
 5.05 Term - 100110  99998  113  1  2  128   43    70 0.884   5.22
 5.04 Intr - 102544 102367  178  1  1  130  111   218 0.999  27.79
 5.03 Intr - 102790 102648  143  2  2  103   85   123 0.711  13.57
 5.02 Intr - 119033 118950   84  0  0   92   91    54 0.575   5.89
 5.01 Init - 129741 129672   70  0  1   72  111    57 0.540   7.61
 5.00 Prom - 148218 148179   40                              -0.86

 6.00 Prom + 162255 162294   40                              -5.46
 6.01 Init + 166065 166122   58  2  1   59   94    57 0.795   2.87
 6.02 Intr + 168029 168073   45  0  0  117   70    50 0.735   4.48
 6.03 Intr + 170337 170426   90  1  0   46   96    46 0.553   1.17
 6.04 Intr + 172848 173000  153  1  0  100   86   216 0.999  22.64
 6.05 Intr + 173779 173881  103  2  1   59   89    42 0.998   0.63
 6.06 Intr + 177816 177855   40  0  1  126   98   -11 0.997   1.93
 6.07 Intr + 179997 180110  114  2  0  141   94    84 0.594  14.94
 6.08 Intr + 186744 186953  210  2  0   94   62    29 0.435   0.01
 6.09 Intr + 187262 187370  109  1  1   67   93   201 0.691  18.36
 6.10 Term + 193732 193868  137  2  2  104   50   193 0.970  15.28
 6.11 PlyA + 198104 198109    6                               1.05

 7.00 Prom + 216622 216661   40                              -2.86
 7.01 Sngl + 216683 217198  516  1  0   39   28   189 0.445   4.04
 7.02 PlyA + 217248 217253    6                               1.05

 8.05 PlyA - 218196 218191    6                               1.05
 8.04 Term - 225655 224737  919  0  1    3   42   575 0.990  36.09
 8.03 Intr - 226125 225668  458  0  2   74   19   468 0.685  30.52
 8.02 Intr - 228450 228261  190  2  1  -46   18   252 0.438   4.39
 8.01 Intr - 228526 228467   60  0  0   71   40   103 0.458   1.65

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -   8352   8246  107  1  2  114   55   142 0.990  12.07
S.002 Init -   8998   8926   73  1  1   71   68    43 0.862   1.87
S.003 Init +  75042  75179  138  2  0   89   75   189 0.818  17.84
S.004 Sngl +  82187  82357  171  1  0  121   53   397 0.943  32.33
S.005 Sngl - 161946 161491  456  0  0   60   36   166 0.809   4.79


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:130952906_131182646|GENSCAN_predicted_peptide_1|202_aa
MRVVSRLSALPPPARTPARRVSALGRAGPPACVLALDGVGGAANRLSWNPCGEKVGAHQP
SSPPRLRRAWASPPKDGPVLTHACGHSPAAAAPPPPAQPSPSLWLELGPACVRAQQCPSE
SSGQTSGDLGTSSSSSAGLSPGSDSDSSGVVCGGRGGNGGMRGAVSRSWSLESLRSATAG
PASAVTNARCVKRHSRVCLRAS

>gi568815596r:130952906_131182646|GENSCAN_predicted_CDS_1|609_bp
atgagggtcgtgtcccgtctgagcgcgctccccccgccggcgcgcacgcctgcccgccgg
gtctctgccctgggccgagcggggccacctgcttgcgtcctcgccctggatggcgtggga
ggcgccgccaaccgtctgagctggaatccttgcggtgaaaaagtgggcgcccaccagccc
tcctcaccaccgcggctgcgacgagcctgggcgtcgcctcctaaggatggccctgtccta
acacacgcgtgcggacacagccccgcggccgccgcaccgccgcccccggcccagccttcc
ccgagcctgtggctggagctcgggcccgcctgcgtgcgggcgcagcaatgccccagcgag
tcaagcgggcagacgagtggcgatctcggcactagcagcagcagcagcgccgggctgtcc
ccgggctccgactcggacagcagcggcgtggtgtgtggcggccgcggaggcaacgggggc
atgcgcggcgccgtgtcccgctcctggagcctggagagcctgcgctcggccaccgccgga
cctgcatcagcagtgaccaatgctcgatgtgtaaaaagacactcccgtgtatgccttaga
gccagttga

>gi568815596r:130952906_131182646|GENSCAN_predicted_peptide_2|115_aa
MASPPRRDPMTLTMEKEVNMKTVSPRSPKREFGLSDDTSRTEIVKASAEYQQCGSTADGL
EAPGARGEMRTAGQKEGPWKFHPVSYISCSDYASKGSPLHSQMNDISVEMPTQSI

>gi568815596r:130952906_131182646|GENSCAN_predicted_CDS_2|348_bp
atggcttctccaccaagaagagatcccatgacactgaccatggaaaaggaggtgaacatg
aaaactgtcagccccagaagcccgaagagagaattcggcttgtcagatgacacatccaga
acagaaattgtgaaagcttcagctgagtaccagcagtgtggcagcacagctgatgggctg
gaggctccaggggcccgaggggagatgagaacagcggggcagaaagaagggccatggaaa
ttccaccctgtcagctatatttcgtgttcggattatgcctcaaagggaagtcctctccac
agccagatgaacgacatttcagtggaaatgccaacacagagcatttaa

>gi568815596r:130952906_131182646|GENSCAN_predicted_peptide_3|170_aa
MPEPSPASMDSCAARASQMSATPCSTAPSPIDHPRAEECEHMARDWQAAPPAAPVRDPLG
EASWAPESAMPDGALDTAVCADEVGSEEDLYDDLHSSSHHYSHPGGGGEQLAINEAGNKL
REKPFSLLTTGVQKYCCCYDNCVQVAVFLLFLLKQKKSMRILIQAKLVPI

>gi568815596r:130952906_131182646|GENSCAN_predicted_CDS_3|513_bp
atgcctgagccttcccccgcctccatggattcctgtgcagcccgagcctcccagatgagc
gccaccccgtgctccacagcgcccagtcccatcgaccacccaagggctgaggagtgcgag
cacatggcgcgggactggcaggcagctccacctgcagccccggtgcgggatccactgggt
gaagccagctgggctcccgagtctgccatgcctgatggagctctggacacagctgtctgc
gctgacgaagtggggagcgaggaggacctgtatgatgacctgcacagctccagccaccac
tacagccaccctggagggggtggggagcagctggctatcaatgaggctgggaacaagttg
agggaaaaaccattttctctcctgacaacaggagttcagaagtattgctgttgctatgac
aactgcgtgcaagttgctgtgtttttgctattcctactgaagcagaagaaatccatgaga
atcctcatccaggcaaaactggttcccatctga

>gi568815596r:130952906_131182646|GENSCAN_predicted_peptide_4|657_aa
MARAPQPRRGPAAPGNALRALLRCNLPPGAQRVVVSAVLALLVLINVPCSPQEFWIGNAN
REQLAVPVTGSDSVLISDGSVVCAEALWDHVTMDDQELGFKAGDVIEVMDATNREWWWGR
VADGEGWFPASFVRLRVNQDEPADDDAPLAGNSGAEDGGAEAQSSKDQMRTNVINEILST
ERDYIKHLRDICEGYVRQCRKRADMFSEEQLRTIFGNIEDIYRCQKAFVKALEQRFNRER
PHLSELGACFLEHQADFQIYSEYCNNHPNACVELSRLTKLSKYVYFFEACRLLQKMIDIS
LDGFLLTPVQKICKYPLQLAELLKYTHPQHRDFKDVEAALHAMKNVAQLINERKRRLENI
DKIAQWQSSIEDWEGEDLLVRSSELIYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKPP
PSFLYAAGFCSSFKTWPSGLMSMKPSLSTGDLSYVWISLSAGEVEASPAAPPMAGERRWE
QPGNGQGSGSAARAEASIWQDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAF
RLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQVQLDQETGFSITELQRKQAMLNASKQ
QVTGKPKAVGRPCYLTRQKHPALPSNRPQQQVLVLAEPRRKPSTFWHSISRLAPFRK

>gi568815596r:130952906_131182646|GENSCAN_predicted_CDS_4|1974_bp
atggcgagggccccgcagccccggcgcggccccgcggcgcccgggaacgccctgcgcgcc
ctgctgcgctgcaacctgccccccggcgcccagcgcgtggtggtctccgccgtgctggcg
ctcctggttctcatcaacgtcccttgcagcccccaggaattctggattgggaatgctaac
agggagcagttggcagtcccagtgacaggatcagattctgtgctcatcagcgatggcagt
gtggtctgcgctgaagcactctgggaccatgtcaccatggacgaccaggagctgggcttc
aaagctggggacgtcatcgaagtgatggatgccaccaacagagagtggtggtggggccgg
gtcgccgatggcgagggctggtttccagccagcttcgttcggctgagggtgaatcaggac
gagcccgcggatgacgacgcccctctggccgggaacagcggagcggaggacggcggggcg
gaggcgcagagcagcaaggaccagatgcggaccaacgtcatcaacgagatcctcagcact
gagcgggactacatcaagcacctgcgcgacatctgcgagggctacgtccggcagtgccgc
aagcgcgcagacatgttcagcgaggagcagctgcgtaccatcttcgggaacatcgaggac
atctaccgctgccagaaggccttcgtgaaggccctggagcagaggttcaaccgcgagcgc
ccacacctgagcgagctgggtgcctgcttcctggagcatcaagccgacttccagatctac
tcggagtactgcaataaccaccccaacgcctgcgtggagctctcccggctcaccaagctc
agcaagtacgtgtacttcttcgaggcctgccggctgctgcagaagatgattgacatctcc
ctggatggcttcctgctgactccggtgcagaagatctgcaagtaccctctgcagctggcc
gagctgctcaaatacacgcacccccagcacagggacttcaaggatgttgaagccgccttg
catgccatgaagaacgtggcccagctcatcaacgagcggaagcggagacttgagaacatc
gacaagattgctcagtggcagagctccatagaggactgggagggagaagatctcttggtc
aggagctcagaactcatctactcgggggagctgactcgagttacacagcctcaagccaaa
agccagcagcgaatgttctttctctttgaccaccagctcatctactgtaagaagccacct
cccagcttcctctacgctgccggcttctgctcctctttcaaaacatggcccagtggcctc
atgtccatgaagccctccttgtccacgggtgatctttcctacgtgtggatctcactgtct
gctggggaggtggaggcatcaccagcagcccctcctatggctggggagaggaggtgggag
cagccaggaaatggtcaggggagcggttcagcagccagggctgaggccagcatctggcag
gacctgctccgccgcgacgtgttgtactacaagggccggctggacatggacggcctggag
gtggtggacctggaggacgggaaggacagagacctccatgtgagcatcaagaacgccttc
cggctgcaccgtggcgccacaggggacagccacctgctgtgcaccaggaagcccgagcag
aagcagcgctggctcaaggcctttgccagggagagggagcaggtgcagctggaccaggag
acaggcttctccatcactgaactgcagaggaagcaggccatgctgaatgccagcaagcag
caggtcacagggaagcccaaagctgttggccggccctgctacctgacgcgccagaagcac
ccagccctgcccagcaaccggccccagcagcaggtcctggtgctggcggagcccaggcgc
aagccatctaccttctggcacagcatcagccggctggcacccttccgcaagtga

>gi568815596r:130952906_131182646|GENSCAN_predicted_peptide_5|195_aa
MNPVYSPGSSGVPYANAKGIGYPAGFPMGYAAAAPAYSPNMYPGANPTFQTGYTPGTPYK
VSCSPTSGAVPPYSSSPNPYQTAVYPVRSAYPQQSPYAQQGTYYTQPLYAAPPHVIHHTT
VVQPNGMPATVYPAPIPPPRGNGVTMGMVAGTTMAMSAGTLLTAHSPTPVAPHPVTVPTY
RAPGTPTYSYVPPQW

>gi568815596r:130952906_131182646|GENSCAN_predicted_CDS_5|588_bp
atgaatcctgtttatagtcctggatcttctggggttccctatgcaaatgccaaaggaatt
ggttatccagctggttttcccatgggctatgcagcagcagctcctgcctattctcctaac
atgtatcctggagcgaatcctaccttccaaacaggttacactcctggcacaccttacaaa
gtgtcctgttcccccaccagcggggctgtgccaccgtactcctcctccccgaacccctac
cagactgccgtgtaccctgtgcgaagtgcctacccccagcagagcccgtatgcacagcaa
ggcacgtactacacacagccgctgtatgcagcacctcctcacgtcatccaccacaccacg
gtggtgcagcccaacggcatgcctgcaacggtgtaccctgctcccatcccccctcctaga
ggcaacggggtcaccatgggcatggtggctgggaccaccatggccatgtcagcaggtacc
ctgctgactgctcactccccaactcctgtcgccccccacccggtcactgtgcccacgtac
cgggccccaggaacgcccacttacagctatgtgccccctcagtggtga

>gi568815596r:130952906_131182646|GENSCAN_predicted_peptide_6|352_aa
MAWVRWLMPVIPALWEAEAGEEMAFVKSGWLLRQIEVSMPVKRGEIHYIHGVVEQQRYTC
DVVTGTILKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPP
DGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSRTNTAYVGSAVMTDETSVVSS
PPPYTAYAAPAPEVGRTLSLQVCAARTPSVTCPGATPQGTLIFHIVPGIAEFGPERVPLL
GWLCLQNSGFGESHYHLVQPYHFTDGQRKAQQAYGYGPYGGAYPPGTQVVYAANGQAYAV
PYQYPYAGLYGQQPANQVIIRERYRDNDSDLALGMLAGAATGMALGSLFWVF

>gi568815596r:130952906_131182646|GENSCAN_predicted_CDS_6|1059_bp
atggcctgggtgcggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggt
gaagagatggcgtttgtgaagagtggctggttgctgcgacagatagaagtatcaatgcca
gtaaaacgaggtgagatacattatattcacggggttgtagagcagcagagatacacatgt
gatgtggtcacaggtactattttgaagcgctggaagaagaactggtttgatctgtggtcg
gatggtcacctgatctattatgatgaccagactcggcagaatatcgaggataaggtccac
atgccaatggactgcatcaacatccgcacggggcaggaatgtcgggatactcagcccccg
gatggaaagtcaaaagactgcatgctccagattgtttgtcgagatgggaaaacaattagt
ctttgtgcagaaagcacagatgattgcttggcctggaaatttacactccaagattctagg
acaaacacagcgtatgtgggctctgcagtcatgaccgatgagacatccgtggtttcctca
cctccaccatacacggcctatgctgcaccggcccctgaggtagggagaaccctgagcctc
caggtgtgtgcagccagaacaccatcagtcacctgcccaggtgccacacctcagggcacc
ctcatcttccatattgtgcctggaattgctgaatttgggccagagagggttccgcttcta
ggctggctttgcctgcagaatagtggttttggtgaatctcattatcacctggtccaacct
tatcattttacagatgggcaaaggaaggcccagcaggcttatggctatgggccatacggt
ggtgcgtacccgccaggaactcaagttgtctacgctgcgaatgggcaggcgtatgccgtg
ccctaccagtacccatatgcaggactttatggacagcagcctgctaaccaagtcatcatt
cgagagcgctatcgagacaacgacagcgacctggcactgggcatgctggcaggagcagcc
acgggcatggccttagggtctctattttgggtcttctag

>gi568815596r:130952906_131182646|GENSCAN_predicted_peptide_7|171_aa
MEYLKPTVKTYCTDKISFKILLLIDNAPAHPSALVEMYEEVTVVFVLTNTTSILQPMDQR
VILNFKSYYLRNTFHETIATIDSDSFDGSGQSKLKTFWKAFAILDVIKNICDSWEVVKTS
TVTGGWRKLIPTLTEDFEGLKTSVKEVPASVVGTARGLELEVEPEDETELL

>gi568815596r:130952906_131182646|GENSCAN_predicted_CDS_7|516_bp
atggaatatctaaaacccactgttaagacctactgcacagataagatttctttcaaaata
ttgctgcttattgacaatgcacctgctcacccaagtgctctggtggagatgtacgaggaa
gttactgttgtttttgtgcttactaacacaacttccattctgcagcccatggatcaaaga
gtaattttgaatttcaagtcttattatttaagaaatacatttcatgagactatagctacc
atagatagtgattcttttgatggatctgggcaaagtaagttgaaaaccttctggaaagca
ttcgccattctagatgtcattaagaacatctgtgattcatgggaggtggtaaaaacatca
acagtaactggaggttggaggaagttgattccaacgctcacagaagactttgagggatta
aagacttcagtgaaggaagtacctgcaagtgtggtgggaacagcaagaggactagaatta
gaagtggagcctgaagatgagactgaattgctgtaa

>gi568815596r:130952906_131182646|GENSCAN_predicted_peptide_8|542_aa
XRITILVELSCEDSQGLNYLRVCPGNQPALVQGILERVVDGPVPHQTVRLEDLDESGEPQ
AGEPVLPGILRPPYLAEGLGLGLPVPGAPGPWSSALGGTTCMRQRDSGDWLAMPSRAENY
EVLYTIGTGSCGRCQKIQRKSDGKILVWKELHYGSMTEAEKQMLVSEVNLLCELKNPNIV
HYYDRIIDRTNTTLYIVMEYCEEGDLASVITKGTKERQYLDEEFVLRVTTQLTLALKRSD
GDHTVVRRDLKPASVFLDGKQNVKLGDLGLARILNHDTSFAKTFVGTPYYMSPEQTNHMS
YNEKPDIWSLGRLLYELGALMPPFTAFSQKELAGKIREGKFRQILYRDSDELNEIIMRML
KDYHRPSVEEILENPLIADLVAEERRRNLERRGRQLGEPEKLQDSSPVLSELKLKEIQLE
ERERALKAREERLEQKEQEFCVRERLAEDRLARAENLLKNYSLLKKFLSLASSPELLSLP
SSVIKKKGHFSGESKENVMRSENSESQLTSKSKCKDLKVLASCFMLPSCGLKPCQILRKI
IN

>gi568815596r:130952906_131182646|GENSCAN_predicted_CDS_8|1629_bp
nnccgcatcaccatcctggtggaactctcctgtgaggacagccaaggcctgaactacctg
cgggtttgcccaggcaaccagccagccctggtccaaggcatcctggagcgagttgtggat
ggccccgtgccccaccagacagtgcgcctggaggacctggacgagagcggtgagccccag
gctggggagccagtgctgcctggcatcctccggccaccctacctggctgaggggctgggc
ctgggcctgccggtccctggagctcccggtccctggagctctgcacttgggggcacaact
tgcatgaggcagcgcgactctggcgactggctggccatgccgtcccgggctgagaactat
gaagtgttgtacaccattggcacaggctcctgtggccgctgccagaagatccagaggaag
agtgacggcaagatactagtttggaaagaacttcattatggctccatgacagaagctgag
aaacagatgcttgtttctgaagtgaatttgctttgtgaactgaaaaatccaaacatcgtt
cattactatgatcgtattattgaccggaccaacacaacactgtacattgtaatggaatat
tgtgaagaaggagacctggctagtgtaattacaaagggaaccaaggaaaggcaatactta
gatgaagagtttgttcttcgagtgacgactcagttgactctggccctgaaacgaagtgat
ggtgatcatactgtagtgcgtcgggatctgaaaccagccagtgttttcctggatggcaag
caaaacgtcaagcttggagatttggggctagccagaatattaaaccacgacacgagtttt
gcaaaaacatttgttggcacaccttattacatgtctcctgaacaaacgaatcacatgtcc
tacaatgagaaaccagatatctggtcattgggccgtttgctgtatgagttaggtgcatta
atgcctccatttacagcttttagccagaaagaacttgctgggaaaatcagagaaggcaaa
ttcaggcaaattctataccgtgactctgacgaattgaatgaaattattatgaggatgtta
aaggattaccatcgaccttctgttgaagaaattctcgagaaccctttaatagcagatttg
gttgcagaagaacgaagaagaaatcttgagagaagagggcgacaattaggagagccagaa
aaattgcaggattccagccctgtattgagtgagctgaaactaaaggaaattcagttagag
gagcgagagcgagctctcaaagcaagagaagaaagattggagcagaaagaacaggagttt
tgtgtccgtgagagactagcagaggacagactggctagagcagaaaatctgttgaagaat
tacagcttgctaaagaagttcctgtctctggcaagtagtccagaacttcttagtcttcca
tcctcagtaattaagaagaaaggtcatttcagtggggaaagtaaagagaatgtcatgagg
agtgagaattctgagagtcagctcacatctaagtccaagtgcaaggacctgaaggtcctt
gcttcatgcttcatgctgcccagctgcgggctcaagccctgtcagatattgagaaaaatt
atcaactaa