GENSCAN 1.0	Date run:  8-Nov-116	Time: 03:19:22

Sequence gi568815580f:22071145_22300820 : 229676 bp : 43.92% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   1418   1413    6                               1.05
 1.05 Term -  21594  21457  138  0  0   34   40   112 0.133  -1.04
 1.04 Intr -  25564  25442  123  1  0   61   44    87 0.122   2.38
 1.03 Intr -  38597  38518   80  0  2  104   63    71 0.314   5.47
 1.02 Intr -  38844  38722  123  1  0  107   59    35 0.684   3.06
 1.01 Init -  57729  57675   55  0  1   63   89    45 0.372   3.55
 1.00 Prom -  71595  71556   40                              -1.06

 2.00 Prom +  85202  85241   40                              -3.86
 2.01 Init + 100001 101135 1135  1  1   47  110  1307 0.996 123.05
 2.02 Intr + 105811 105977  167  2  2   94   89   411 0.998  41.48
 2.03 Intr + 110309 110434  126  1  0   78   51   107 0.946   6.88
 2.04 Term + 129512 129679  168  1  0  100   52   188 0.385  14.28
 2.05 PlyA + 130809 130814    6                               1.05

 3.04 PlyA - 137551 137546    6                               1.05
 3.03 Term - 158468 158219  250  1  1  121   51    83 0.196   3.08
 3.02 Intr - 165886 165767  120  0  0   87   61    67 0.315   3.51
 3.01 Init - 171126 171050   77  0  2   66   78    34 0.132   0.77
 3.00 Prom - 172640 172601   40                              -2.16

 4.06 PlyA - 173133 173128    6                               1.05
 4.05 Term - 176147 176056   92  0  2   75   54    72 0.010   0.38
 4.04 Intr - 202419 202285  135  1  0  -90  110   364 0.498  21.34
 4.03 Intr - 208316 208255   62  1  2   98   75     7 0.067  -1.22
 4.02 Intr - 208944 208898   47  0  2  144   85    13 0.134   3.81
 4.01 Init - 212761 212717   45  1  0   67   92    30 0.181   1.99

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 202640 202472  169  2  1   74  110    37 0.936   4.20


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580f:22071145_22300820|GENSCAN_predicted_peptide_1|172_aa
MLPPKPPGPYNAANKGATAPSIQSVEPDPGFYDPSLFLLQQLEPKVMADLHLYSSFLSIG
GSEMPPKTGRHVKEQASSRTAPYRLQWDENQFPFFLLGHLPPSAQNDERRTGGQQRILKP
DSTTPSEGLLQKLKCVKERLYRVMPITAVILLIEKEASSLEAFSSLYENLRK

>gi568815580f:22071145_22300820|GENSCAN_predicted_CDS_1|519_bp
atgctgccccccaaacctccaggaccatacaatgctgccaataaaggggctacagctccc
tccatccaaagtgtggaaccggacccaggcttctatgacccatctctgttcttacttcag
cagctagagcctaaggtgatggcagacttgcacctttactcttccttcctctctatagga
ggaagtgagatgcctccaaagacaggcagacatgtgaaggagcaggccagcagcaggact
gctccttaccgcctccaatgggatgagaaccagtttccatttttccttttgggtcacctg
ccccccagtgcccagaatgatgagaggagaaccggtggccagcagagaatcctgaagcct
gattctaccactccttcggaaggattattacaaaagctcaagtgcgtcaaagaaaggttg
tatagagtcatgcccatcacagctgtcatactcttgattgaaaaggaggcctcatccctt
gaagccttctccagcctgtacgagaatctcagaaagtag

>gi568815580f:22071145_22300820|GENSCAN_predicted_peptide_2|531_aa
MALTDGGWCLPKRFGAAGADASDSRAFPAREPSTPPSPISSSSSSCSRGGERGPGGASNC
GTPQLDTEAAAGPPARSLLLSSYASHPFGAPHGPSAPGVAGPGGNLSSWEDLLLFTDLDQ
AATASKLLWSSRGAKLSPFAPEQPEEMYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAAA
AAASSPVYVPTTRVGSMLPGLPYHLQGSGSGPANHAGGAGAHPGWPQASADSPPYGSGGG
AAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAAREPGGYAAAGSGGAGGVSGGGSSL
AAMGGREPQYSSLSAARPLNGTYHHHHHHHHHHPSPYSPYVGAPLTPAWPAGPFETPVLH
SLQSRAGAPLPVPRGPSADLLEDLSESRECVNCGSIQTPLWRRDGTGHYLCNACGLYSKM
NGLSRPLIKPQKRVPSSRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGAGAP
VMTGAGESTNPENSELKYSGQDGLYIGVSLASPAEVTSSVRPDSWCALALA

>gi568815580f:22071145_22300820|GENSCAN_predicted_CDS_2|1596_bp
atggccttgactgacggcggctggtgcttgccgaagcgcttcggggccgcgggtgcggac
gccagcgactccagagcctttccagcgcgggagccctccacgccgccttcccccatctct
tcctcgtcctcctcctgctcccggggcggagagcggggccccggcggcgccagcaactgc
gggacgcctcagctcgacacggaggcggcggccggacccccggcccgctcgctgctgctc
agttcctacgcttcgcatcccttcggggctccccacggaccttcggcgcctggggtcgcg
ggccccgggggcaacctgtcgagctgggaggacttgctgctgttcactgacctcgaccaa
gccgcgaccgccagcaagctgctgtggtccagccgcggcgccaagctgagccccttcgca
cccgagcagccggaggagatgtaccagaccctcgccgctctctccagccagggtccggcc
gcctacgacggcgcgcccggcggcttcgtgcactctgcggccgcggcggcagcagccgcg
gcggcggccagctccccggtctacgtgcccaccacccgcgtgggttccatgctgcccggc
ctaccgtaccacctgcaggggtcgggcagtgggccagccaaccacgcgggcggcgcgggc
gcgcaccccggctggcctcaggcctcggccgacagccctccatacggcagcggaggcggc
gcggctggcggcggggccgcggggcctggcggcgctggctcagccgcggcgcacgtctcg
gcgcgcttcccctactctcccagcccgcccatggccaacggcgccgcgcgggagccggga
ggctacgcggcggcgggcagtgggggcgcgggaggcgtgagcggcggcggcagtagcctg
gcggccatgggcggccgcgagccccagtacagctcgctgtcggccgcgcggccgctgaac
gggacgtaccaccaccaccaccaccaccaccaccaccatccgagcccctactcgccctac
gtgggggcgccactgacgcctgcctggcccgccggacccttcgagaccccggtgctgcac
agcctgcagagccgcgccggagccccgctcccggtgccccggggtcccagtgcagacctg
ctggaggacctgtccgagagccgcgagtgcgtgaactgcggctccatccagacgccgctg
tggcggcgggacggcaccggccactacctgtgcaacgcctgcgggctctacagcaagatg
aacggcctcagccggcccctcatcaagccgcagaagcgcgtgccttcatcacggcggctt
ggattgtcctgtgccaactgtcacaccacaactaccaccttatggcgcagaaacgccgag
ggtgaacccgtgtgcaatgcttgtggactctacatgaaactccatggggcgggtgccccg
gtgatgactggtgcgggagagagcaccaatcccgagaacagcgagctcaagtattcgggt
caagatgggctctacataggcgtcagtctcgcctcgccggccgaagtcacgtcctccgtg
cgaccggattcctggtgcgccctggccctggcctga

>gi568815580f:22071145_22300820|GENSCAN_predicted_peptide_3|148_aa
MRNRFCGQHSHANTQLPLTCVADVESIYPPPLSYPYPSSSGETRSIRTNQSTPISFAKML
RSGMDRAPKCTKKSLNLLETQIGITTAVFEHFWSRYSIPKQSRSVTSPQPTRQNFHVNAS
CGLPMVSNGYFQLTGSFFPTLFQIYENT

>gi568815580f:22071145_22300820|GENSCAN_predicted_CDS_3|447_bp
atgaggaacaggttttgtgggcagcactcccatgcaaacacccaactgccattaacttgc
gtggcagatgtcgagagtatctaccctcctcccttatcctacccttatcccagctccagt
ggtgagacccgatcaatccgaaccaatcagagtactcctatttcctttgccaaaatgctt
cggtcagggatggatagggcaccaaaatgtaccaagaagagcctaaatctactggagact
caaatcggcattaccactgcagtttttgagcatttctggagcagatacagcattccaaaa
caatccagaagtgtcacctctcctcagcccacacgccagaacttccatgtaaatgcctca
tgtgggcttcccatggtgtctaacggatactttcaactaactgggtctttcttccctacc
ctcttccagatctatgaaaatacctga

>gi568815580f:22071145_22300820|GENSCAN_predicted_peptide_4|126_aa
MDAAIRGHFYTASGKGQSGSSNTLLSLLAPSLLDWPQSSMGMVPVHMGRSTEEEEEEEEE
EEEEEEEEEEEEEEEEEEEEKEEKEEEEEEESPEPPVPTASTQGSALEDFQGCWSPFVQR
AESRRA

>gi568815580f:22071145_22300820|GENSCAN_predicted_CDS_4|381_bp
atggatgcggcgatcaggggacacttctacactgctagtgggaagggccagagtggcagt
agcaacaccctcctatccttgctggccccgagcctgctggactggccacagtctagcatg
ggcatggtgccagtgcacatgggtaggagcacagaagaggaagaggaagaagaggaagaa
gaagaagaggaagaggaagaggaagaagaagaagaagaagaagaagaagaggaagaagaa
aaagaagaaaaggaggaggaggaggaggaggaatccccagaacctccagttcccacagcc
agcacccaaggctctgctctggaggacttccagggctgctggagcccctttgtccagagg
gcagagagccgaagagcctga