Result of FASTA (omim) for pF1KB5272
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5272, 248 aa
  1>>>pF1KB5272 248 - 248 aa - 248 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.7683+/-0.000628; mu= -19.0410+/- 0.039
 mean_var=535.4217+/-111.670, 0's: 0 Z-trim(117.9): 60  B-trim: 452 in 1/54
 Lambda= 0.055428
 statistics sampled from 30293 (30349) to 30293 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.662), E-opt: 0.2 (0.356), width:  16
 Scan time:  5.820

The best scores are:                                      opt bits E(85289)
NP_001036816 (OMIM: 191030,255310,609284) tropomyo ( 248) 1511 135.0 1.2e-31
NP_705935 (OMIM: 191030,255310,609284) tropomyosin ( 248) 1431 128.6   1e-29
NP_001036818 (OMIM: 191030,255310,609284) tropomyo ( 247) 1351 122.2 8.8e-28
NP_001265118 (OMIM: 191030,255310,609284) tropomyo ( 248) 1284 116.8 3.6e-26
NP_001036817 (OMIM: 191030,255310,609284) tropomyo ( 247) 1271 115.8 7.4e-26
NP_001288218 (OMIM: 115196,191010,611878) tropomyo ( 248) 1246 113.8   3e-25
NP_003281 (OMIM: 600317) tropomyosin alpha-4 chain ( 248) 1238 113.1 4.6e-25
XP_005260099 (OMIM: 600317) PREDICTED: tropomyosin ( 248) 1209 110.8 2.3e-24
NP_001317275 (OMIM: 115196,191010,611878) tropomyo ( 248) 1190 109.3 6.6e-24
NP_001018008 (OMIM: 115196,191010,611878) tropomyo ( 245) 1184 108.8 9.2e-24
XP_005254704 (OMIM: 115196,191010,611878) PREDICTE ( 251) 1179 108.4 1.2e-23
XP_016878029 (OMIM: 115196,191010,611878) PREDICTE ( 275) 1161 107.0 3.6e-23
NP_001317273 (OMIM: 115196,191010,611878) tropomyo ( 248) 1158 106.7 3.9e-23
NP_689476 (OMIM: 191030,255310,609284) tropomyosin ( 285) 1125 104.1 2.7e-22
XP_005254708 (OMIM: 115196,191010,611878) PREDICTE ( 248) 1107 102.6 6.6e-22
NP_001018004 (OMIM: 115196,191010,611878) tropomyo ( 284) 1104 102.5 8.6e-22
XP_005254707 (OMIM: 115196,191010,611878) PREDICTE ( 248) 1102 102.2 8.7e-22
XP_005254694 (OMIM: 115196,191010,611878) PREDICTE ( 326) 1104 102.5 9.5e-22
NP_001018007 (OMIM: 115196,191010,611878) tropomyo ( 284) 1100 102.1 1.1e-21
NP_001317280 (OMIM: 115196,191010,611878) tropomyo ( 245) 1096 101.8 1.2e-21
NP_001288155 (OMIM: 108120,190990,255310,601680,60 ( 284) 1087 101.1 2.2e-21
XP_005254703 (OMIM: 115196,191010,611878) PREDICTE ( 275) 1073 100.0 4.7e-21
XP_016882677 (OMIM: 600317) PREDICTED: tropomyosin ( 268) 1063 99.2   8e-21
NP_001138632 (OMIM: 600317) tropomyosin alpha-4 ch ( 284) 1063 99.2 8.3e-21
NP_001018005 (OMIM: 115196,191010,611878) tropomyo ( 284) 1048 98.0 1.9e-20
XP_016870580 (OMIM: 108120,190990,255310,601680,60 ( 284) 1046 97.8 2.1e-20
NP_003280 (OMIM: 108120,190990,255310,601680,60928 ( 284) 1046 97.8 2.1e-20
NP_001288173 (OMIM: 115196,191010,611878) tropomyo ( 284) 1044 97.7 2.4e-20
XP_016882678 (OMIM: 600317) PREDICTED: tropomyosin ( 245) 1038 97.1   3e-20
XP_011526533 (OMIM: 600317) PREDICTED: tropomyosin ( 245) 1038 97.1   3e-20
XP_005254702 (OMIM: 115196,191010,611878) PREDICTE ( 365) 1042 97.6 3.2e-20
XP_006722928 (OMIM: 600317) PREDICTED: tropomyosin ( 284) 1034 96.9 4.2e-20
XP_005254695 (OMIM: 115196,191010,611878) PREDICTE ( 371) 1037 97.2 4.3e-20
NP_998839 (OMIM: 108120,190990,255310,601680,60928 ( 284) 1022 95.9 8.1e-20
NP_001018006 (OMIM: 115196,191010,611878) tropomyo ( 284) 1016 95.4 1.1e-19
XP_016878023 (OMIM: 115196,191010,611878) PREDICTE ( 395) 1019 95.8 1.2e-19
XP_016878024 (OMIM: 115196,191010,611878) PREDICTE ( 311) 1015 95.4 1.3e-19
NP_001018020 (OMIM: 115196,191010,611878) tropomyo ( 284) 1012 95.1 1.4e-19
NP_001265119 (OMIM: 191030,255310,609284) tropomyo ( 227) 1008 94.7 1.5e-19
XP_016870579 (OMIM: 108120,190990,255310,601680,60 ( 284)  981 92.6 7.8e-19
NP_001288156 (OMIM: 108120,190990,255310,601680,60 ( 284)  981 92.6 7.8e-19
NP_001265120 (OMIM: 191030,255310,609284) tropomyo ( 158)  971 91.6   9e-19
NP_000357 (OMIM: 115196,191010,611878) tropomyosin ( 284)  965 91.3 1.9e-18
XP_016878027 (OMIM: 115196,191010,611878) PREDICTE ( 368)  965 91.5 2.3e-18
XP_006720730 (OMIM: 115196,191010,611878) PREDICTE ( 368)  960 91.1   3e-18
XP_016878028 (OMIM: 115196,191010,611878) PREDICTE ( 365)  954 90.6 4.2e-18
XP_005254696 (OMIM: 115196,191010,611878) PREDICTE ( 371)  949 90.2 5.6e-18
XP_016878025 (OMIM: 115196,191010,611878) PREDICTE ( 395)  931 88.8 1.6e-17
XP_016878026 (OMIM: 115196,191010,611878) PREDICTE ( 311)  927 88.3 1.7e-17
NP_001265117 (OMIM: 191030,255310,609284) tropomyo ( 182)  910 86.8 2.9e-17


>>NP_001036816 (OMIM: 191030,255310,609284) tropomyosin   (248 aa)
 initn: 1511 init1: 1511 opt: 1511  Z-score: 688.9  bits: 135.0 E(85289): 1.2e-31
Smith-Waterman score: 1511; 100.0% identity (100.0% similar) in 248 aa overlap (1-248:1-248)

               10        20        30        40        50        60
pF1KB5 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 EADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQ
              190       200       210       220       230       240

               
pF1KB5 TLLDLNEM
       ::::::::
NP_001 TLLDLNEM
               

>>NP_705935 (OMIM: 191030,255310,609284) tropomyosin alp  (248 aa)
 initn: 1431 init1: 1431 opt: 1431  Z-score: 654.3  bits: 128.6 E(85289): 1e-29
Smith-Waterman score: 1431; 94.0% identity (97.2% similar) in 248 aa overlap (1-248:1-248)

               10        20        30        40        50        60
pF1KB5 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_705 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_705 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 EADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQ
       ::::::::::::::::::::::::::::::::.: :..:... . .::: : :  :::::
NP_705 EADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_705 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQ
              190       200       210       220       230       240

               
pF1KB5 TLLDLNEM
       ::::::::
NP_705 TLLDLNEM
               

>>NP_001036818 (OMIM: 191030,255310,609284) tropomyosin   (247 aa)
 initn: 1351 init1: 1351 opt: 1351  Z-score: 619.7  bits: 122.2 E(85289): 8.8e-28
Smith-Waterman score: 1351; 93.1% identity (95.1% similar) in 245 aa overlap (1-245:1-245)

               10        20        30        40        50        60
pF1KB5 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 EADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQ
       :::::::::::::::::::::::::::::::::::::::::..:    :..   .  :  
NP_001 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLERNRLLSNELKL
              190       200       210       220       230       240

               
pF1KB5 TLLDLNEM
       :: ::   
NP_001 TLHDLCD 
               

>>NP_001265118 (OMIM: 191030,255310,609284) tropomyosin   (248 aa)
 initn: 1432 init1: 1284 opt: 1284  Z-score: 590.8  bits: 116.8 E(85289): 3.6e-26
Smith-Waterman score: 1284; 85.9% identity (93.1% similar) in 248 aa overlap (1-248:1-248)

               10        20        30        40        50        60
pF1KB5 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 EADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQ
       ::::::::::::::::::::::::::::::::.: :..:... . .::: : :  :::::
NP_001 EADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQ
       ::::::::::::::::::::::::::::::::::::::::::.:   : ..   .. ::.
NP_001 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDH
              190       200       210       220       230       240

               
pF1KB5 TLLDLNEM
       .: :.. .
NP_001 ALNDMTSI
               

>>NP_001036817 (OMIM: 191030,255310,609284) tropomyosin   (247 aa)
 initn: 1271 init1: 1271 opt: 1271  Z-score: 585.2  bits: 115.8 E(85289): 7.4e-26
Smith-Waterman score: 1271; 86.9% identity (92.2% similar) in 245 aa overlap (1-245:1-245)

               10        20        30        40        50        60
pF1KB5 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 EADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQ
       ::::::::::::::::::::::::::::::::.: :..:... . .::: : :  :::::
NP_001 EADRKYEEVARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQ
       :::::::::::::::::::::::::::::::::::::::::..:    :..   .  :  
NP_001 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLERNRLLSNELKL
              190       200       210       220       230       240

               
pF1KB5 TLLDLNEM
       :: ::   
NP_001 TLHDLCD 
               

>>NP_001288218 (OMIM: 115196,191010,611878) tropomyosin   (248 aa)
 initn: 1351 init1: 1246 opt: 1246  Z-score: 574.3  bits: 113.8 E(85289): 3e-25
Smith-Waterman score: 1246; 81.9% identity (94.8% similar) in 248 aa overlap (1-248:1-248)

               10        20        30        40        50        60
pF1KB5 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
       ::: ...:::.:::. ::.::: :::::  ::::.. ::. :: :::.::::::::::::
NP_001 MAGSSSLEAVRRKIRSLQEQADAAEERAGTLQRELDHERKLRETAEADVASLNRRIQLVE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
       :::::::::::::::::::::::::::::::::::.:: :::::::.:::::::::::::
NP_001 EELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 EADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQ
       .::::::::::::::::.::::.::::::.:.::.:::::::.:::::::::::::::::
NP_001 DADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQ
       :::.::::::.:.:::::::::::::::::.::::.:::::.:.  .:::.:  ..::::
NP_001 KEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLSMHQMLDQ
              190       200       210       220       230       240

               
pF1KB5 TLLDLNEM
       :::.::.:
NP_001 TLLELNNM
               

>>NP_003281 (OMIM: 600317) tropomyosin alpha-4 chain iso  (248 aa)
 initn: 1238 init1: 1238 opt: 1238  Z-score: 570.9  bits: 113.1 E(85289): 4.6e-25
Smith-Waterman score: 1238; 80.9% identity (95.9% similar) in 246 aa overlap (1-246:1-246)

               10        20        30        40        50        60
pF1KB5 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
       :::....::::::::.::::::.::.::. ::::..:::. ::.::..::.:::::::::
NP_003 MAGLNSLEAVKRKIQALQQQADEAEDRAQGLQRELDGERERREKAEGDVAALNRRIQLVE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
       ::::::::::::::::::::::::::::::::::::::.:::::::.::.::::::::::
NP_003 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 EADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQ
       :::::::::::::::.::.:::.:::::..: ::..::::::::::::::::: .::::.
NP_003 EADRKYEEVARKLVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQ
       ::::::::::.:.:::::::::::::::.::::::::::::.::  .:::..  .. :::
NP_003 KEDKYEEEIKLLSDKLKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGLHQTLDQ
              190       200       210       220       230       240

               
pF1KB5 TLLDLNEM
       :: .::  
NP_003 TLNELNCI
               

>>XP_005260099 (OMIM: 600317) PREDICTED: tropomyosin alp  (248 aa)
 initn: 1372 init1: 1209 opt: 1209  Z-score: 558.4  bits: 110.8 E(85289): 2.3e-24
Smith-Waterman score: 1209; 78.2% identity (94.4% similar) in 248 aa overlap (1-248:1-248)

               10        20        30        40        50        60
pF1KB5 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
       :::....::::::::.::::::.::.::. ::::..:::. ::.::..::.:::::::::
XP_005 MAGLNSLEAVKRKIQALQQQADEAEDRAQGLQRELDGERERREKAEGDVAALNRRIQLVE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
       ::::::::::::::::::::::::::::::::::::::.:::::::.::.::::::::::
XP_005 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 EADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQ
       :::::::::::::::.::.:::.:::::..: ::..::::::::::::::::: .::::.
XP_005 EADRKYEEVARKLVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQ
       ::::::::::.:.:::::::::::::::.:::::::::::::.:   : ..   .. ::.
XP_005 KEDKYEEEIKLLSDKLKEAETRAEFAERTVAKLEKTIDDLEDELYAQKLKYKAISEELDH
              190       200       210       220       230       240

               
pF1KB5 TLLDLNEM
       .: :.. .
XP_005 ALNDMTSL
               

>>NP_001317275 (OMIM: 115196,191010,611878) tropomyosin   (248 aa)
 initn: 1295 init1: 1190 opt: 1190  Z-score: 550.1  bits: 109.3 E(85289): 6.6e-24
Smith-Waterman score: 1190; 78.6% identity (92.3% similar) in 248 aa overlap (1-248:1-248)

               10        20        30        40        50        60
pF1KB5 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
       ::: ...:::.:::. ::.::: :::::  ::::.. ::. :: :::.::::::::::::
NP_001 MAGSSSLEAVRRKIRSLQEQADAAEERAGTLQRELDHERKLRETAEADVASLNRRIQLVE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
       :::::::::::::::::::::::::::::::::::.:: :::::::.:::::::::::::
NP_001 EELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 EADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQ
       .::::::::::::::::.::::.::::::.:.::.:::::::.:::::::::::::::::
NP_001 DADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQ
       :::.::::::.:.:::::::::::::::::.::::.::::::.:   : ..   .. ::.
NP_001 KEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDH
              190       200       210       220       230       240

               
pF1KB5 TLLDLNEM
       .: :.. .
NP_001 ALNDMTSI
               

>>NP_001018008 (OMIM: 115196,191010,611878) tropomyosin   (245 aa)
 initn: 1169 init1: 1169 opt: 1184  Z-score: 547.6  bits: 108.8 E(85289): 9.2e-24
Smith-Waterman score: 1184; 79.4% identity (91.9% similar) in 247 aa overlap (1-247:1-244)

               10        20        30        40        50        60
pF1KB5 MAGITTIEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVE
       ::: ...:::.:::. ::.::: :::::  ::::.. ::. :: :::.::::::::::::
NP_001 MAGSSSLEAVRRKIRSLQEQADAAEERAGTLQRELDHERKLRETAEADVASLNRRIQLVE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAE
       :::::::::::::::::::::::::::::::::::.:: :::::::.:::::::::::::
NP_001 EELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 EADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQ
       .::::::::::::::::.::::.::::::.:.::.:::::::.:::::::::::::::::
NP_001 DADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 KEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQ
       :::.::::::.:.:::::::::::::::::.::::.::::::.:    :..   .:. ..
NP_001 KEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDQLYQQLEQN---RRLTNE
              190       200       210       220       230          

               
pF1KB5 TLLDLNEM
         : ::: 
NP_001 LKLALNED
       240     




248 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 12:22:27 2016 done: Sat Nov  5 12:22:28 2016
 Total Scan time:  5.820 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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