GENSCAN 1.0	Date run:  7-Nov-116	Time: 15:22:39

Sequence gi568815592r:134070271_134417460 : 347190 bp : 41.72% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  13479  13586  108  2  0   63  100    76 0.686   6.57
 1.02 Term +  15525  15635  111  2  0   89   49   145 0.992   8.28
 1.03 PlyA +  15759  15764    6                               1.05

 2.06 PlyA -  16085  16080    6                               1.05
 2.05 Term -  32843  32778   66  2  0   91   42    70 0.313  -0.34
 2.04 Intr -  32980  32892   89  2  2   25   45   150 0.174   3.17
 2.03 Intr -  45231  44767  465  1  0   80   54   263 0.320  14.27
 2.02 Intr -  47352  47274   79  0  1   90   86    15 0.645  -0.29
 2.01 Init -  53818  53747   72  1  0   57   65    70 0.245   2.72
 2.00 Prom -  66589  66550   40                              -3.65

 3.00 Prom +  69942  69981   40                              -5.45
 3.01 Init +  76724  76859  136  1  1   98   76    92 0.431   9.35
 3.02 Intr +  90869  91046  178  0  1   63   85   115 0.119   6.76
 3.03 Term +  98531  98636  106  2  1   58   36    82 0.003  -3.10
 3.04 PlyA +  98688  98693    6                               1.05

 4.12 PlyA -  99004  98999    6                               1.05
 4.11 Term - 100165  99998  168  1  0   79   46   290 0.996  20.80
 4.10 Intr - 100645 100556   90  1  0   76   89    30 0.692   1.17
 4.09 Intr - 100908 100753  156  0  0   71   69   158 0.996  11.49
 4.08 Intr - 101462 101367   96  2  0   91  105    86 0.991   9.89
 4.07 Intr - 102046 101923  124  0  1   78   80    49 0.995   2.77
 4.06 Intr - 102504 102392  113  0  2   83   87   126 0.833  10.26
 4.05 Intr - 102884 102753  132  2  0   87   83   104 0.996   9.72
 4.04 Intr - 103296 103192  105  0  0   78   86   108 0.987   9.09
 4.03 Intr - 103810 103735   76  0  1   99  100    55 0.991   6.40
 4.02 Intr - 104316 104241   76  1  1  111   98   112 0.995  12.15
 4.01 Init - 105391 105274  118  1  1   63   94   151 0.684  11.61
 4.00 Prom - 109340 109301   40                              -4.65

 5.00 Prom + 118243 118282   40                              -5.65
 5.01 Sngl + 123621 123854  234  2  0   25   49   201 0.782   4.75
 5.02 PlyA + 124657 124662    6                               1.05

 6.00 Prom + 127253 127292   40                              -5.15
 6.01 Sngl + 147013 147417  405  0  0   45   38   260 0.795  12.73
 6.02 PlyA + 148046 148051    6                               1.05

 7.00 Prom + 154581 154620   40                              -3.55
 7.01 Init + 182017 182102   86  0  2   91   72    64 0.073   5.44
 7.02 Intr + 197628 197821  194  0  2   50   44    96 0.012  -0.39
 7.03 Intr + 207162 207254   93  1  0   58   64   106 0.303   4.22
 7.04 Term + 223749 223867  119  1  2    4   42   132 0.017  -2.08
 7.05 PlyA + 225082 225087    6                               1.05

 8.05 PlyA - 226499 226494    6                               1.05
 8.04 Term - 227739 227530  210  0  0  -51   47   402 0.927  18.51
 8.03 Intr - 228108 227915  194  1  2   65   81   204 0.816  15.69
 8.02 Intr - 231630 231582   49  0  1   80   88     5 0.137  -2.97
 8.01 Init - 239147 239073   75  2  0   64   70   155 0.944  12.44
 8.00 Prom - 239761 239722   40                              -8.55

 9.07 PlyA - 241001 240996    6                               1.05
 9.06 Term - 246016 245880  137  2  2   65   44   106 0.431   1.10
 9.05 Intr - 247674 247545  130  0  1  101   70    78 0.166   6.65
 9.04 Intr - 262062 261944  119  1  2  105   68    38 0.083   2.76
 9.03 Intr - 276557 276354  204  0  0   50   62   120 0.471   3.85
 9.02 Intr - 278103 277926  178  0  1   22   81   126 0.808   3.87
 9.01 Init - 281416 281303  114  1  0   87   -7   126 0.685   3.26
 9.00 Prom - 292133 292094   40                              -4.95

10.05 PlyA - 293653 293648    6                               1.05
10.04 Term - 298457 298163  295  1  1   91   48   159 0.835   5.99
10.03 Intr - 298637 298565   73  0  1   52   87    55 0.815  -0.65
10.02 Intr - 299126 298973  154  2  1   32   52   124 0.010   1.92
10.01 Init - 306693 306454  240  0  0   62   52   178 0.553   9.52
10.00 Prom - 317018 316979   40                              -3.05

11.05 PlyA - 317789 317784    6                               1.05
11.04 Term - 323178 322931  248  1  2   80   42   281 0.858  17.67
11.03 Intr - 324354 324291   64  0  1   64   77     8 0.137  -5.33
11.02 Intr - 326193 325740  454  2  1   47   59   190 0.118   4.33
11.01 Intr - 337645 337516  130  2  1   48   49   137 0.009   4.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 227226 227062  165  0  0   80   43   272 0.945  16.40


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:134070271_134417460|GENSCAN_predicted_peptide_1|72_aa
MRIVTGSIWKESYIGEQLSEGIPSVSGQGNKGQVLKCWMLHTLDHWTPGSSAFGLLDLHQ
WFARGSRAFATD

>gi568815592r:134070271_134417460|GENSCAN_predicted_CDS_1|219_bp
atgaggattgtaactggatccatctggaaggaatcctacataggagagcagctgagtgag
gggatcccatcagtatcagggcaagggaacaagggtcaggtgctgaagtgctggatgctt
cataccctcgatcactggactccaggttcttcagcttttggactcttggacctacaccag
tggtttgccaggggctctcgggcctttgccacagactga

>gi568815592r:134070271_134417460|GENSCAN_predicted_peptide_2|256_aa
MHMKRLALHPARCQPLLLQPPSSSRFASALTPQPLPLLLWLVTASASSTTQGKKSQSSWR
SSQPLASKKEKDGAEKRGGGSSTSEGAQHVLTPKTLGNRKEANPRMLPRPGKPPQLQEGK
QRAGPKHWEGGRGSISRESSREEPLPSGTGQFCSPPLPLSFPQATVTCTAHLRPHHRGRA
PVGPVTAVFLWLQFPATHTLALLDEAQEASLLPLVTVQEAKQELLPQLAQNVQDLDQPEK
ANYMPPANHTGCPTSQ

>gi568815592r:134070271_134417460|GENSCAN_predicted_CDS_2|771_bp
atgcacatgaagcgcttagccctgcatccagcacgttgtcagccattgctattacaacca
ccttcatcatctcgttttgcttcagccctcactcctcagccacttccactgctcctgtgg
ttagtgaccgcctctgcctcctccactacccaagggaagaagagccagtcgagctggagg
tccagccagcccttggcctccaagaaggaaaaggacggcgctgagaagcgaggtgggggc
agctccacgtccgaaggagcccagcacgtgctaacacctaagaccctgggcaaccgaaag
gaagcaaaccccaggatgctgccacgacccggaaaaccaccacagctccaggagggaaag
caaagggccggcccaaaacactgggaaggaggaagagggagcatctctcgggagtcctcc
cgggaggagccacttccttctgggaccggacagttttgctcacccccattgcccctgtcc
ttcccccaggccaccgtcacctgcaccgcccacctgcgtcctcaccaccgcggcagggcc
cctgttggcccagtgacagcagtgttcctctggcttcagttcccagccacgcacacactt
gccctcctggacgaggcccaggaagccagtttgctacctctggtaaccgtccaggaagct
aaacaagaacttctgccacaactggcacaaaatgtccaggacttggaccaacctgagaaa
gccaattatatgcccccagccaatcacacgggatgccccacttctcaatag

>gi568815592r:134070271_134417460|GENSCAN_predicted_peptide_3|139_aa
MAEGEANMLFFTWQQEEVRSKSGEKFLIKPSDLGRTFSLSGEQLGGLAPEAIKFMTPGLR
DLSYSGVFMTLWNWKDRIVHSESDSQEWLEGKVPPNQEGFGKTFRLWKGEVVCFVHYDIL
STRNRAQSRLSNISGKNYL

>gi568815592r:134070271_134417460|GENSCAN_predicted_CDS_3|420_bp
atggcggaaggggaagcaaacatgctgttcttcacatggcagcaggaagaagtgcggagt
aaaagcggggaaaagttccttataaaaccttcggatcttgggagaaccttctcactatca
ggagaacagcttggaggactggctcctgaagccattaagtttatgacccctggacttaga
gatctttcctattctggcgtttttatgactctatggaattggaaggacaggatagttcat
agtgagagtgactcacaggaatggctggaagggaaagtaccccctaatcaggaaggtttt
gggaaaacattcaggctctggaagggcgaagttgtctgctttgtccactacgatatcctg
agcactcgcaatagagcccagagtaggctttcaaatatttctggaaagaattacctgtaa

>gi568815592r:134070271_134417460|GENSCAN_predicted_peptide_4|417_aa
MGEMQGALARARLESLLRPRHKKRAEAQKRSESFLLSGLAFMKQRRMGLNDFIQKIANNS
YACKHPEVQSILKISQPQEPELMNANPSPPPSPSQQINLGPSSNPHAKPSDFHFLKVIGK
GSFGKEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF
LEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT
STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL
QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNP
NVSGPNDLRHFDPEFTEEPVPNSIGKSPDSVLVTASVKEAAEAFLGFSYAPPTDSFL

>gi568815592r:134070271_134417460|GENSCAN_predicted_CDS_4|1254_bp
atgggggagatgcagggcgcgctggccagagcccggctcgagtccctgctgcggccccgc
cacaaaaagagggccgaggcgcagaaaaggagcgagtccttcctgctgagcggactggct
ttcatgaagcagaggaggatgggtctgaacgactttattcagaagattgccaataactcc
tatgcatgcaaacaccctgaagttcagtccatcttgaagatctcccaacctcaggagcct
gagcttatgaatgccaacccttctcctccaccaagtccttctcagcaaatcaaccttggc
ccgtcgtccaatcctcatgctaaaccatctgactttcacttcttgaaagtgatcggaaag
ggcagttttggaaaggagaagcatattatgtcggagcggaatgttctgttgaagaatgtg
aagcaccctttcctggtgggccttcacttctctttccagactgctgacaaattgtacttt
gtcctagactacattaatggtggagagttgttctaccatctccagagggaacgctgcttc
ctggaaccacgggctcgtttctatgctgctgaaatagccagtgccttgggctacctgcat
tcactgaacatcgtttatagagacttaaaaccagagaatattttgctagattcacaggga
cacattgtccttactgacttcggactctgcaaggagaacattgaacacaacagcacaaca
tccaccttctgtggcacgccggagtatctcgcacctgaggtgcttcataagcagccttat
gacaggactgtggactggtggtgcctgggagctgtcttgtatgagatgctgtatggcctg
ccgcctttttatagccgaaacacagctgaaatgtacgacaacattctgaacaagcctctc
cagctgaaaccaaatattacaaattccgcaagacacctcctggagggcctcctgcagaag
gacaggacaaagcggctcggggccaaggatgacttcatggagattaagagtcatgtcttc
ttctccttaattaactgggatgatctcattaataagaagattactcccccttttaaccca
aatgtgagtgggcccaacgacctacggcactttgaccccgagtttaccgaagagcctgtc
cccaactccattggcaagtcccctgacagcgtcctcgtcacagccagcgtcaaggaagct
gccgaggctttcctaggcttttcctatgcgcctcccacggactctttcctctga

>gi568815592r:134070271_134417460|GENSCAN_predicted_peptide_5|77_aa
MIPLEVVDNPSLSWQLREQGDTNLGQESVPSSRHTHTHTHTHAHSDWDNVNTPMNLNMHI
FGMWEESGVTWRKPTKT

>gi568815592r:134070271_134417460|GENSCAN_predicted_CDS_5|234_bp
atgattccacttgaggtggtagacaacccaagcttatcctggcagctcagggaacaaggt
gacaccaaccttggacaggagtccgtcccatcctcaaggcacactcacactcacacccac
actcatgctcactcagactgggacaacgtgaacacgccaatgaacctcaacatgcatatc
tttgggatgtgggaggaaagtggagttacatggagaaaacctacaaagacatga

>gi568815592r:134070271_134417460|GENSCAN_predicted_peptide_6|134_aa
MVIEGQSCPRAPATGGSTAFCAQTSVAGLQNACGPLFLCLAEGFLRAVAPSLTHRTTTAF
GSWVVGFTHTVEWVSHAFVPGLQSSTSHHTGQDGMWPHYLTTANMPIVCKFGTSTATLIK
MMVWTRIAGVWSRD

>gi568815592r:134070271_134417460|GENSCAN_predicted_CDS_6|405_bp
atggtcatagagggtcaaagctgtccacgagctccagcaacaggaggaagcacagcattc
tgtgctcagactagtgtggcaggcctgcagaatgcgtgtgggcccttgttcctgtgcttg
gctgagggcttcctgagagcagttgctccatctctgacccaccggaccactactgccttt
ggatcctgggtggtgggcttcactcacacagtcgaatgggtttctcatgcctttgtccct
gggctacagtcctccacttcacaccacaccggtcaagatggaatgtggccacattatctc
actacagcaaacatgcccatagtttgcaaatttggtacatcaaccgccacgctcataaag
atgatggtttggaccaggatagcaggagtctggtcaagagattaa

>gi568815592r:134070271_134417460|GENSCAN_predicted_peptide_7|163_aa
MEVLLEEKDLASWLSGSLAAHTMCALHRQFCLHWLSPYTGFNVSLLYDSLTLFTSFEASQ
VIFTGPIKDRVYDVCLLLREWLDRPSECTGVRQALCDLDEGQGRLNGARNDQGPGGVRGG
QTQADEDSGHVASFSEHVAVQIAQVLSKNNSKEPFGSEAYLGL

>gi568815592r:134070271_134417460|GENSCAN_predicted_CDS_7|492_bp
atggaagtactcctggaggagaaggatttagcttcctggttatcaggctctctggctgct
cacacaatgtgcgcgttgcacagacagttttgtctccattggcttagtccttatactggc
ttcaacgtgtcccttctttatgactccttgacacttttcaccagctttgaagcctcacaa
gtgatttttacaggcccaattaaggacagagtttacgatgtttgcttgctcttgagagag
tggctggaccgacccagtgaatgcacaggagttaggcaagctctatgtgacctagatgaa
gggcagggaaggctaaatggagcacgaaatgaccagggtcctggaggtgtgagaggtggg
cagacccaggcagatgaagattcaggtcatgttgcaagtttttctgaacatgtggctgtg
cagatagctcaggtcctgagcaaaaacaacagcaaagaaccctttggcagtgaagcctat
cttggcctctga

>gi568815592r:134070271_134417460|GENSCAN_predicted_peptide_8|175_aa
MWESGGEGGGGGEGGAGGGGQEKQTFTRAVVAHANNPSALGGKVRFLEQQNKMLETKWSL
LQQQKTAWSNMDNMFESYFNNLRRQLETRGQEKLKLEAELGNMQGLISDTSVMLSMDNSR
SPDMDGIITEVKAQYEEITNRSRSEAESMYQIKYEELQMLAGKHGDDLQHTKTEI

>gi568815592r:134070271_134417460|GENSCAN_predicted_CDS_8|528_bp
atgtgggaaagtggaggagaaggaggtggaggaggtgaaggaggtgcaggaggaggagga
caggaaaagcagacatttaccagagcagtggtggctcatgccaataatcccagtgctttg
ggaggcaaggtacggttcctggagcagcagaacaagatgctagagaccaagtggagcctc
ctgcagcagcagaagacagcttggagcaacatggacaacatgttcgagagctacttcaac
aaccttaggcggcagctggagactcggggccaggagaagctgaagctggaggcagagctt
ggcaacatgcaggggctgatctcggatacgtctgtgatgctgtccatggacaacagccgc
tccccggacatggacggcatcatcactgaggtcaaggcgcagtacgaggagatcaccaac
cgcagccggagtgaggctgagagcatgtaccagatcaaatatgaggagctgcagatgctg
gctgggaagcacggggatgacctgcagcatacaaagactgagatctag

>gi568815592r:134070271_134417460|GENSCAN_predicted_peptide_9|293_aa
MSSSKSLQQSIQIREHPLTISKRLLDLQIIVRFFKKAELWKVQWQVWSEANQRTQEIGEE
LSFRSGSRQSTLPSFFCKITTGYFSERCYGDASALNTMHADHHSKCPTLHICIPSPESCL
WTQCPHPGSRLEVPDNEYPHPTPTVAFKPELNRNWVSCALSLLVFRLPDTLCLLPPQHSS
HNPEIASQTCSLTLKQGECLIHQHVLLNYSSHWNLHNQKQLSSLKPPPGAHHLEKSDSLP
APAAEEQPEHSEFQGGLDYLPAPNGQAGKARLEMQATCQAQLEGQRRLPSTLD

>gi568815592r:134070271_134417460|GENSCAN_predicted_CDS_9|882_bp
atgagcagctctaagtcccttcagcagagtatacaaatccgggagcatccactgactatc
agcaaacgactcttagacttacagataattgttaggttcttcaagaaagcagagctatgg
aaagttcaatggcaggtgtggtccgaagccaaccagaggacgcaggagattggagaagag
ctctccttccgttcaggctcacggcaaagcacgttgccttctttcttttgcaaaataacc
acaggatacttctcagagagatgctacggagatgcttcagccttgaacaccatgcatgca
gaccaccattccaaatgcccaactctccacatctgcattccttcacctgagagctgcctc
tggacccagtgtccccacccaggcagcagactggaagtgccagacaatgaatatccccac
cccacccctaccgtggccttcaaaccagaactaaacaggaactgggtttcctgtgccctt
tccttgctggtgtttcggctcccagacactctgtgcttactgccaccacaacactcatca
cataaccctgaaattgccagccagacttgcagtctaactcttaagcaaggagaatgtctt
attcaccagcatgtgctgcttaactacagctcccactggaacttgcacaatcaaaaacaa
ctctcctctctcaagccgcctccaggagcgcatcacctggagaagagcgactcgctcccc
gcgccggccgcggaagagcagccagaacacagtgaatttcagggtgggctggactatctc
cctgcaccaaatgggcaagctgggaaggcaaggctagaaatgcaggcaacatgtcaggcc
cagctagagggccagcgaaggctcccaagcacccttgactga

>gi568815592r:134070271_134417460|GENSCAN_predicted_peptide_10|253_aa
MLGLVTADVTTLRCKGARGESVERVTLRGVMVFARNHAASPSQLCRQEAGECGTRPHCDL
PSDLLQGLSIGQSQPETRGQVMKAPVATQKAEPTLLLGREPGQRESFKSPLRSSCSTTQP
TNERDCLQRELAFMAKVQLLSDCSCQMQVPRFHRTRKVVFLGLSKKFTTFSHKLFTFILH
QHQNLAIELTHSLHEIEERRQSLDTKVSLQLSSQLKVFNEPALHQMEPGGIIIRGSHCPQ
KPNQSHPCLLSLS

>gi568815592r:134070271_134417460|GENSCAN_predicted_CDS_10|762_bp
atgctggggctagtcacagcagatgttacaaccctgaggtgtaaaggagcaagaggagag
agtgtggaaagggtcaccttgagaggagttatggtctttgctcgcaatcatgcagccagc
ccaagccaactctgtaggcaggaagcaggggaatgtgggaccagaccgcactgtgatctt
ccttctgacctcctgcaggggctctccattggacaaagccaaccagaaaccagagggcaa
gtaatgaaggctcctgtagctactcagaaagcagagcctaccctgctgctagggagagaa
ccagggcagcgtgagagctttaaaagccccctcaggtcctcctgttctacgactcaacca
accaatgaaagagattgccttcagagggagctggcttttatggcaaaggtgcagttatta
agtgattgcagctgccaaatgcaagtgccccggttccacaggacaagaaaagttgtattc
cttgggctctccaagaagttcacaactttctctcataaattatttacatttatcctccac
caacatcagaatctagcaatcgaactcacacactcattacatgaaattgaagagagacgg
cagtcattagacacaaaggtctcactacagctctcctcgcagctgaaggtgttcaatgaa
cctgccctccatcaaatggaacctggtggaatcattatccgaggcagtcactgtccgcaa
aagccaaaccagtctcatccttgcctgctctcgctctcatga

>gi568815592r:134070271_134417460|GENSCAN_predicted_peptide_11|298_aa
XPGIGPGSSVEPTASTPSSVHRKSFQKYYWHLAASKCEDIPHVRETLERRKERKKERKKE
RKKERKKERKKERKKERKKERKKERKKGKKGKKERKKKRKKERRKERKKERKKERKERKE
RKKERKKERKKEGKKERKKEERKKIKERKEGGKEGRKESGGEGGRKEERKEKERKEKVTR
SASAYKSDPTKCRGEFRKQSPLAESKQKPGCKGSYSSGPPAAGPRQPGLMARIATTGAGV
GYTVGHTITGGFNEGSNAEPASPDITYQEPQGTQMSQRQQPCFYEIKPFLECARNRVT

>gi568815592r:134070271_134417460|GENSCAN_predicted_CDS_11|897_bp
ngtcctggcataggtcctgggtcctctgtagaacccacagcttctacaccttcatcggtc
cacaggaaaagctttcagaaatattactggcatttggctgcatccaagtgtgaagatatc
cctcatgtcagagagaccctggaaagaaggaaagaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaagaaaggaaagaaaggaaagaaagaaagaaagaaaaaaagaaag
aaagaaagaaggaaagaaagaaagaaagaaagaaagaaagaaagaaaggaaagaaaggaa
agaaagaaagaaagaaaaaaagaaagaaagaaagaaggaaagaaagaaagaaagaaagaa
gaaagaaagaaaataaaagaaagaaaggaaggagggaaggaaggaaggaaagaaagcggg
ggagagggagggaggaaggaagaaaggaaagaaaaagaaagaaaagaaaaggtgacaagg
tctgcttctgcttataaatctgaccctaccaagtgcagaggagagttccgcaagcaatcc
ccattagctgaatccaaacagaagccagggtgtaagggatcttattcatctggccctcct
gctgctgggcccaggcagccaggtctgatggcccggatagcaaccactggagctggcgtg
gggtacacggtgggtcataccatcactgggggcttcaatgaaggaagtaatgctgagcct
gcaagtcctgacatcacctaccaggagccccagggaacccagatgtcacagcggcagcag
ccttgcttctatgagataaaaccgtttttggagtgtgcccggaaccgggtgacataa