GENSCAN 1.0	Date run:  5-Nov-116	Time: 08:24:09

Sequence gi568815583f:59904964_60105938 : 200975 bp : 40.68% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2839   2920   82  0  1   64   86    63 0.725   4.88
 1.02 Term +   6004   6251  248  2  2   63   47   154 0.787   3.77
 1.03 PlyA +   6279   6284    6                               1.05

 2.00 Prom +   7544   7583   40                              -4.05
 2.01 Init +  18063  18160   98  2  2   59   98   128 0.908   8.73
 2.02 Intr +  18264  18401  138  0  0  115   61    26 0.633   1.26
 2.03 Intr +  19733  19844  112  2  1   59  -30   115 0.678  -3.74
 2.04 Term +  22049  22204  156  1  0   65   50   159 0.889   6.75
 2.05 PlyA +  22458  22463    6                               1.05

 3.00 Prom +  25850  25889   40                              -6.05
 3.01 Init +  26825  27013  189  1  0   63   48   146 0.010   7.16
 3.02 Intr +  40067  40262  196  1  1   13   38   166 0.002   2.17
 3.03 Intr +  40814  40897   84  0  0   59   58   107 0.163   3.67
 3.04 Term +  59911  60119  209  2  2   55   33   170 0.605   4.72
 3.05 PlyA +  61632  61637    6                               1.05

 4.00 Prom +  67864  67903   40                              -4.25
 4.01 Init +  69768  69862   95  2  2   64   69   134 0.933   9.00
 4.02 Intr +  79621  79733  113  1  2   74   -5    96 0.440  -2.00
 4.03 Intr +  85328  85503  176  0  2   26  103   198 0.568  13.84
 4.04 Intr +  89216  89351  136  1  1   58   57    70 0.486   0.12
 4.05 Intr +  90256  90532  277  2  1   -5   75   244 0.656   9.45
 4.06 Intr +  91808  91892   85  2  1  117   17    49 0.451  -0.40
 4.07 Intr +  96940  97301  362  0  2   48  -24   243 0.608   2.19
 4.08 Intr +  97476  97644  169  0  1  110   97     6 0.847   2.73
 4.09 Intr +  98036  98245  210  1  0   54  -23   355 0.125  19.19
 4.10 Intr +  98715  98802   88  2  1   27   61    77 0.121  -2.48
 4.11 Intr +  99262  99606  345  2  0  112    8   198 0.709   8.64
 4.12 Term +  99789 100978 1190  1  2   21   46  1277 0.993 107.70
 4.13 PlyA + 103533 103538    6                               1.05

 5.00 Prom + 115697 115736   40                              -3.75
 5.01 Init + 127326 127444  119  2  2   65   84   111 0.806   8.12
 5.02 Term + 133230 133392  163  0  1   38   42   171 0.532   3.93
 5.03 PlyA + 133578 133583    6                               1.05

 6.07 PlyA - 135854 135849    6                               1.05
 6.06 Term - 138798 138701   98  1  2   61   48   150 0.596   5.45
 6.05 Intr - 149237 149082  156  0  0  124   98    95 0.696  13.16
 6.04 Intr - 149695 149496  200  0  2   80    3   112 0.705  -0.03
 6.03 Intr - 160546 160431  116  1  2   72   76   106 0.356   6.13
 6.02 Intr - 161301 161215   87  0  0   86   68    55 0.123   2.55
 6.01 Init - 168792 168622  171  0  0   81   37   129 0.096   6.59
 6.00 Prom - 169291 169252   40                             -12.03

 7.00 Prom + 169447 169486   40                              -3.55
 7.01 Init + 181880 181964   85  1  1   65   71   100 0.895   7.03
 7.02 Term + 183491 183741  251  0  2   60   47   207 0.742   8.68
 7.03 PlyA + 185056 185061    6                               1.05

 8.03 PlyA - 186647 186642    6                               1.05
 8.02 Term - 196868 196428  441  2  0   84   38   130 0.244   1.87
 8.01 Init - 200232 200185   48  0  0   58   94    56 0.543   4.20

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  98036  98278  243  1  0   54   35   372 0.841  23.42
S.002 Init - 114421 114343   79  1  1   71   28   125 0.829   6.07


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:59904964_60105938|GENSCAN_predicted_peptide_1|109_aa
MEKEDVESGSATCEERMLYTSVLLNHQVLEVLARAIRQEKEIQSIRLGKEEVKLSLFVDD
MIVYLENPIVSAQNLLKLTSNFSKVSGYKINVQKSQEFLYTNNREPNHE

>gi568815583f:59904964_60105938|GENSCAN_predicted_CDS_1|330_bp
atggaaaaggaggatgtagaaagcggaagtgcaacttgtgaggaaagaatgttatatacg
tctgtgctgctcaatcaccaagtgttggaagttctggccagggcaatcaggcaggagaaa
gaaatacagagtattcgattaggaaaagaggaagtcaaattgtccctgtttgtagatgac
atgattgtatatttagaaaaccccatcgtctcagcccaaaatctccttaagctgacaagc
aacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagaattcctatac
accaataacagagagccaaatcatgagtga

>gi568815583f:59904964_60105938|GENSCAN_predicted_peptide_2|167_aa
MRETWQLLTPALVILMFPSAARDGISWNEKEPRWFFKKSLQRPLLLEIRSKKGVAPKTIQ
GSSNLCFQFNEGSPEIKETSTTKFGHTGAGTQPSEGAFFAGDNIQPKGKLQSLLLHGLDE
AGNRHPQQTNTGTENQTPHVLSHKWELNNENTWTQEGGTSQPGPVGE

>gi568815583f:59904964_60105938|GENSCAN_predicted_CDS_2|504_bp
atgcgggagacttggcagctcctgaccccagcactggtcattctgatgttcccctctgcc
gcccgagatggcatttcctggaatgaaaaggagccaaggtggttcttcaaaaagtctttg
cagagaccattactgttggaaattagaagcaagaaaggagttgccccaaaaacaatacaa
gggagttctaacctttgtttccaatttaatgaaggctcccctgagattaaagaaacgtca
acaaccaagtttggccacacaggtgctggaacacagccaagtgaaggagccttctttgct
ggagataacatacaacctaaagggaaacttcagtccttgttattacacggacttgatgaa
gccggaaaccgtcatcctcagcaaactaacacaggaacagaaaaccaaacaccgcatgtt
ctcagtcataagtgggagttgaacaatgagaacacatggacacaggaagggggaacatca
caaccggggcctgttggggaatag

>gi568815583f:59904964_60105938|GENSCAN_predicted_peptide_3|225_aa
MRKATDKDPSVGAITASVVAEATCSGIATESGSDFIIRECNDSLVSISHPEASKSNCSTV
CFNPGDWLARRLVPLCCGGPMLILTQRPGPTLLKVVAASQTANHHYFLERPSETLSIKEP
ISNRRMLSGPREQVTERIRIYNAPGKLTTVLRFLLLAMWNYNKRDVTVFHLDQQLQVLNM
ENSEKTEVVLFACSSFKPITDMHLRLFELAKSTSMEQEDTELSNS

>gi568815583f:59904964_60105938|GENSCAN_predicted_CDS_3|678_bp
atgagaaaagccactgataaggacccatcagtaggagccattactgcatcagttgttgcc
gaggctacctgctcaggcattgctactgaaagtgggtcagatttcatcatcagggaatgt
aatgacagcttggtctccatatcccatcctgaagcatcaaaatctaactgttcaacagtc
tgcttcaatcctggagactggctggcgaggaggctggtccctctttgctgtggaggtcct
atgctgatcctaacacaacgcccaggccccacactgctgaaagtggttgctgccagccag
acggctaatcatcattatttcctggaaaggccctctgagaccttgagcataaaagagcct
atttcaaaccggaggatgctctctggtccacgtgagcaggttaccgagcgcattaggatt
tataacgctcctgggaagctgaccactgtattacgcttcctgctgctagctatgtggaac
tacaacaagagagatgtcacagttttccatttagatcaacaacttcaagttcttaacatg
gaaaattcagagaagactgaagtggttctctttgcttgcagttcctttaaacctatcacc
gacatgcacctcagattgtttgagctggcaaagtctacatcaatggaacaggaagataca
gagttgtcaaactcataa

>gi568815583f:59904964_60105938|GENSCAN_predicted_peptide_4|1081_aa
MERSDQRSLNCNALYEGQQVGVMVGDTIAGLSKKAVERNGNQTKRKVEEGNDEIRAEISE
TENRIIIEIGSADGDIVLATSSEDSQTLEALISIFTSEQSPKQYIVPTRRRLNSLDRKPK
SYPAGPSTANRSSPSGPHSWEPVTLSYLFICALKDDSDFQASRKRQKANRLLRGKVFAGV
VDAAAAPTLPTQLATREKSLTLLFGGGRQFRGGRLDPENDGIQVPQPSGSAAVFKTAQLN
SWAHSPFLGESSARAGEHSSPAYLGSSFILVRPAEHRRKCPANPGKFALLGMPRPPTIFY
RSTYQYERMHIFTKRILKIPGGVYAGTLPQQERSCLAHSNCFVPRPAVLGSRKAVDQRLS
ILGNTSLAHYSSSRISQAPQLFGLPSSFLPRTFDPNLAAQSNPPNAAPRYDLKRDYFFRI
KKVTLFFSSSTSVNIEKRALASQPRQPRARAISILMKLFNLLNSSCLSYVLQFDDDDDDG
SDDDEDNDNNNNDSFNPSKANPNRREPAARTRRSDPRHIPRSPRRKTLWFFPQVVEDTAV
LLHTNYTKLKQLHRKVKSNFDLTLRGLGGKGDCHMIAKKWHINEAPLQGSFLLLSPLKTI
RWFEGGHGGSHLAQRRRGAHSSALRSPNTSLPPSAPGLRSRARPPAGRSRSVADRAARDA
AGLSSRAQVRAESNRTRTLRAECASTRKVAGERVRALADRAPQAPPPTPEVCYSVWLTPP
VSLCIHATFPYYPPPSQIRAVRRPARTQSKKRARKKMPRPGRNTYSDQKPPYSYISLTAM
AIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKG
SFWALHPSCGDMFENGSFLRRRKRFKVLKSDHLAPSKPADAAQYLQQQAKLRLSALAASG
THLPQMPAAAYNLGGVAQPSGFKHPFAIENIIAREYKMPGGLAFSAMQPVPAAYPLPNQL
TTMGSSLGTGWPHVYGSAGMIDSATPISMASGDYSAYGVPLKPLCHAAGQTLPAIPVPIK
PTPAAVPALPALPAPIPTLLSNSPPSLSPTSSQTATSQSSPATPSETLTSPASALHSVAV
H

>gi568815583f:59904964_60105938|GENSCAN_predicted_CDS_4|3246_bp
atggaaaggagtgatcaacgttccctgaactgcaatgcattatacgagggtcagcaagtg
ggagtcatggttggcgacacaattgctggcctcagcaaaaaagcagtagaaaggaatgga
aatcaaaccaaaaggaaggtggaggaaggaaatgacgagatcagagcagaaatcagtgaa
acagaaaacagaataataatagagattggatctgctgatggagacattgtcttagctact
tcatcggaagactcgcagactctagaagccctgataagtatcttcacaagtgaacaatca
ccaaagcaatatatagtgcccaccagaagacgactcaattccttggacagaaagcccaag
agctacccagctggcccttcaacggcaaatcgctcctcgcccagtggtcctcactcctgg
gagccagtgacactttcttatttatttatttgcgccctgaaggacgactcggatttccag
gccagccggaagaggcagaaagcgaacaggctgctcagagggaaagtttttgcaggagtt
gtggacgccgcagcagccccaactctcccaacccagcttgcgacccgagagaagtcgctc
acacttctctttgggggagggcgacagttccggggaggacgcttggatcccgaaaatgac
gggatccaggtcccacaaccctcaggaagcgctgcggtcttcaaaactgcgcagctaaat
tcctgggcgcattctccctttcttggcgagtccagtgcccgtgccggggagcattccagc
ccagcttacctcggcagctcctttattttggttaggccagctgagcacagaagaaaatgc
cctgccaatcccggaaagtttgcgctactgggaatgcctcgaccgcccacgatattttat
cggtctacgtatcagtatgaacggatgcacatatttactaagaggatcctaaaaattcct
gggggagtctatgctggtacccttccacagcaggagcgctcctgccttgcccacagtaac
tgttttgtaccgaggccagctgtactcgggagcaggaaagctgtggaccagcgcctttcc
attctgggaaacacaagccttgcccactattcctcatcacggatctcccaagctccccag
ctctttggactccccagctccttcctccccaggaccttcgatccgaatctggccgcacaa
agtaaccccccaaacgccgcacctcgttatgacctgaagcgcgattattttttccgaatt
aagaaggtgacattattcttttcttcaagcacttctgttaatattgaaaaacgtgcgctt
gcatctcaaccgaggcagcccagagccagagccatttcaatattaatgaaattgtttaat
ctcctaaattcatcgtgtttaagttacgttttgcaatttgatgatgatgatgatgacggc
agcgacgacgatgaggataatgataataataataatgattcatttaacccttccaaggcg
aatccgaaccgaagggagcctgctgctcgcaccaggcggagtgacccaaggcacattccc
cgctccccaagaaggaaaactctatggttctttccccaagttgtagaagatactgctgtc
ttactacacactaactatacaaagctgaagcagctgcataggaaagtcaagtcaaatttc
gacctaactctccggggactggggggcaagggcgattgtcatatgatagctaagaagtgg
cacattaatgaagcgccgctacaggggtcttttctgctcctgtcaccgcttaaaactatc
agatggttcgagggaggacatggaggcagccacctagctcagcggagacgcggagcccac
agcagcgccctccggagccctaacacgtcgctgccaccatccgcgccgggactccgcagc
cgagctcggccgcccgcaggacgctccaggagcgtcgcggaccgggcggcacgggacgct
gcggggctgagctcaagagcccaggttcgcgccgagtccaaccggacccggacgctgcgc
gcggagtgcgcgtcgacccgcaaagttgctggcgaaagagtccgggcgctggctgatcga
gcgccgcaggccccacccccgacccccgaagtctgttactcggtctggctgaccccgccg
gtgtctctgtgcatccatgctacctttccctattacccacccccttcccagatccgagca
gtccgccggcccgcgcggacccagagcaagaagagggcgaggaagaagatgcctcggccc
ggccgcaacacgtacagcgaccagaagccgccctactcgtacatctcgctgaccgctatg
gccatccagagctctcccgagaagatgctgccgctgagcgagatctacaagttcatcatg
gaccgcttcccctactacagggagaacacgcagcgctggcagaacagtctgcgccacaac
ctctccttcaacgactgcttcatcaagatcccgcggcggccggaccagccaggcaagggc
agcttctgggcgctgcacccaagctgcggggacatgttcgagaacggcagcttcctgcgg
cgccgcaagcgcttcaaggtgcttaagtccgaccacctggcgcccagcaagccagccgac
gcggcgcagtacctgcagcagcaggccaagctgcggctcagcgcgctggcggcctcgggc
acgcacctgccacagatgcccgccgccgcctacaacttgggcggcgtggcgcagccctcg
ggcttcaagcaccccttcgccatcgagaacatcatcgcgcgggaatacaagatgcctggg
gggctggccttctccgccatgcagccggtgcccgctgcctacccgctccccaaccagttg
actaccatgggcagctcgctgggcaccggctggccacacgtgtatggctccgccggcatg
atcgactcggccacccccatctccatggcgagtggcgactacagcgcctacggcgtgccg
ttgaagccgctgtgccacgcggcgggccaaacgctgcccgccatccccgtgcccattaag
cccacgccggccgccgtgcccgcgctgcctgcgctgccagcgcccatccccaccttgctc
tcgaactcgccgccctcgctcagccccacgtcctcgcaaacagccaccagccaaagcagc
cccgccacccccagcgaaacgctcaccagcccggcctccgccttgcactcggtggcggtg
cactga

>gi568815583f:59904964_60105938|GENSCAN_predicted_peptide_5|93_aa
MEAEKSHDVPPAISKLETQEAWWSNSSQIKKVEEPGELIVGQPEDTLCVDSLEQKRHLGS
PGNTKGSKRSALALSPGVTPGESAAPGGCLQRA

>gi568815583f:59904964_60105938|GENSCAN_predicted_CDS_5|282_bp
atggaggctgagaaatcccatgatgtgccacctgctatcagcaaactggagacccaggaa
gcctggtggtctaattccagtcagataaagaaggtcgaagaaccaggggagctcatagta
ggacagcctgaagacactctgtgtgtagacagcctggagcagaaacgccacctgggaagc
cctgggaacacaaaaggatcaaagcggagcgcactggcgctgagtcctggagtcactcca
ggggagtcggcagccccaggtggctgcctccagagggcctga

>gi568815583f:59904964_60105938|GENSCAN_predicted_peptide_6|275_aa
MTSVLMRRGRDTRDAHTQRKGHGRTQQKGGHLQAKERGLRRNQTCRPLDLGLPATRTNGL
WKVVSHFLLTVAQMGLLEALGYQWQLAGSCQLVTGNQPLPVEPGSSKVKNTHPGEILPRR
SRFLRIIPTHKHFAHQPLSQDLLLRNPDKTMTDSADLKKLNLMPAVEKSRKKLVAWKCQR
AQKLMTLDTSGKCWQSALDPLDRRLEDSTLRNPTNQHAQLISPNMKSCSPGLNLNQDEGM
VGQGVFDFVPQELTLADKQQIGFFRDTVKITKEKS

>gi568815583f:59904964_60105938|GENSCAN_predicted_CDS_6|828_bp
atgactagtgtgctcatgagaagaggaagagacaccagggatgcgcacacccagagaaaa
ggccatgggaggacacagcaaaaaggtggccatctgcaagccaaggagagaggcctcagg
agaaatcaaacctgccgaccccttgatcttggacttccagccaccagaactaatggtttg
tggaaggtcgtgtctcatttcctgctcacagtggcgcagatggggcttttggaggctctg
ggctatcagtggcagctggcaggatcctgtcagctggtgactggaaatcagccactacct
gtggaacctggtagcagcaaagtgaaaaacacacatcctggggaaatcctaccaaggcgt
tccagatttctcaggatcatacccacacataaacattttgcgcatcagcctttgtctcag
gatctgcttttgaggaatccagacaagacaatgactgattcagcagacttgaaaaagttg
aatcttatgccagcagtggaaaaatccaggaagaaacttgtagcatggaaatgtcaaagg
gctcagaagttaatgacattggatacctctggaaaatgctggcagtcagctttagatcct
ctagacaggagattagaagactctacactaagaaatccaactaaccagcatgcacaactg
atttccccaaacatgaagtcctgcagcccaggtcttaacctgaatcaggatgaggggatg
gtgggtcaaggagtcttcgatttcgtgcctcaggaactaactctggctgacaaacagcaa
ataggatttttccgagacaccgttaagatcacaaaagagaagagctga

>gi568815583f:59904964_60105938|GENSCAN_predicted_peptide_7|111_aa
MTELLTHMKDGDWRTAPISMPDSRYETPGTHIVKGGVIVRLFSLTSSGPRENERDEGPVT
GRGMNHTEELEDSKLTFKGRNIQTGPIHSEPVKNILFVMMDKSKIPQECSH

>gi568815583f:59904964_60105938|GENSCAN_predicted_CDS_7|336_bp
atgacagaattactgactcacatgaaggatggggactggcggacggcacccatcagcatg
cctgatagccggtatgagactccagggactcacatcgtcaaaggaggagtcatcgttaga
cttttctcactgacatccagtggcccaagggagaacgagagagatgaagggccagtcaca
ggaaggggtatgaaccacactgaggagctagaagattcaaaattaactttcaagggtagg
aacatacagacaggaccaattcactcagaacccgtaaaaaatatactctttgtgatgatg
gataagtctaaaatccctcaagaatgtagccactga

>gi568815583f:59904964_60105938|GENSCAN_predicted_peptide_8|162_aa
MKDIQEFSEEALAQDQVTLLRSKSLVGILFNAVASGSHSEVYGSVLLVCPVLPSCWSSRK
GQKVTRSLLLHLLLLLFLLNPLKWTFKCELCNHALAKEQPQRQLQLVQRDGLVGIPDSPD
FCSQTLTNLATRWLMPVLTAWTRKCLSLPKVCRRSAAGNTEV

>gi568815583f:59904964_60105938|GENSCAN_predicted_CDS_8|489_bp
atgaaagacattcaagagtttagtgaggaggctcttgctcaagaccaggttactttgcta
cggagcaagtccttggtaggcattctgttcaatgcggtagcctctggaagtcacagtgag
gtttatggttcagtactgctggtttgccctgttcttcccagctgctggagcagccgcaag
gggcaaaaggtgaccaggtcacttctactccacctgcttctgttgttgtttcttttaaat
cctcttaagtggacttttaagtgtgaactttgcaaccatgccctggctaaagaacaacct
cagaggcagctgcagcttgttcaaagagatgggctggtgggaatcccagactctcctgat
ttctgttcacaaactctcactaatctggcaaccaggtggttaatgccagtgttgaccgca
tggacacgcaagtgtctttctttgcccaaagtctgcaggaggtcagcagctggaaacact
gaagtctga