GENSCAN 1.0	Date run:  5-Nov-116	Time: 07:58:55

Sequence gi568815597f:180130530_180374576 : 244047 bp : 44.98% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  24379  24643  265  0  1   69  100   553 0.869  49.77
 1.02 Intr +  27847  27993  147  2  0   51   64    68 0.119   0.91
 1.03 Intr +  35962  36062  101  2  2  107   61    74 0.131   6.43
 1.04 Intr +  44792  44837   46  1  1   85   94    52 0.884   3.48
 1.05 Intr +  45402  45504  103  1  1  114   19    81 0.267   3.03
 1.06 Intr +  48265  48355   91  1  1   77   83    94 0.272   7.80
 1.07 Intr +  51645  51790  146  2  2  118   67   175 0.751  17.48
 1.08 Intr +  53387  53521  135  2  0  113   99    71 0.997  10.38
 1.09 Intr +  55524  55653  130  0  1   86  105   205 0.968  22.70
 1.10 Intr +  59023  59145  123  0  0  116  105    66 0.997  11.88
 1.11 Intr +  59904  60051  148  2  1   93   98   117 0.999  13.01
 1.12 Intr +  63684  63863  180  1  0   55  110   241 0.999  22.84
 1.13 Term +  65733  66508  776  1  2  113   46   733 0.999  65.15
 1.14 PlyA +  67482  67487    6                               1.05

 2.00 Prom +  96643  96682   40                              -6.36
 2.01 Init + 100001 100076   76  1  1   75   74    54 0.619   4.13
 2.02 Intr + 102751 103099  349  2  1  126   81   267 0.978  24.22
 2.03 Intr + 103877 103939   63  2  0   60  102    46 0.663   1.03
 2.04 Intr + 104385 104593  209  0  2   37   64   108 0.768   2.02
 2.05 Intr + 117756 117927  172  1  1  117  108   221 0.932  26.00
 2.06 Intr + 120639 120714   76  0  1   69   82    20 0.543  -0.98
 2.07 Intr + 123870 123913   44  2  2   73   96    49 0.003   1.24
 2.08 Intr + 129880 129909   30  1  0  101   93    13 0.007   0.35
 2.09 Intr + 135863 136065  203  2  2   94  115   406 0.995  42.83
 2.10 Intr + 140851 141005  155  2  2   64   94   187 0.996  16.69
 2.11 Intr + 141306 141477  172  2  1   90   83   197 0.941  18.92
 2.12 Term + 143656 144050  395  2  2  123   37   207 0.909  14.30
 2.13 PlyA + 144501 144506    6                               1.05

 3.00 Prom + 170235 170274   40                              -3.36
 3.01 Sngl + 172493 173386  894  1  0   66   42   377 0.879  27.04
 3.02 PlyA + 173434 173439    6                               1.05

 4.00 Prom + 174602 174641   40                              -4.46
 4.01 Init + 174693 174781   89  2  2   62   91    81 0.753   5.91
 4.02 Term + 195742 195826   85  1  1  105   48    48 0.109  -0.37
 4.03 PlyA + 198158 198163    6                               1.05

 5.00 Prom + 198727 198766   40                              -3.26
 5.01 Sngl + 204025 205041 1017  0  0   73   43   450 0.660  36.04
 5.02 PlyA + 205269 205274    6                               1.05

 6.00 Prom + 205438 205477   40                              -4.96
 6.01 Sngl + 206382 207353  972  2  0   70   48   373 0.815  28.25
 6.02 PlyA + 207385 207390    6                               1.05

 7.03 PlyA - 211262 211257    6                               1.05
 7.02 Term - 227270 227154  117  2  0   41   53    46 0.169  -5.06
 7.01 Init - 233198 233142   57  2  0   69   31   187 0.946  10.41

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  38636  38604   33  2  0  134   47    23 0.808   0.39
S.002 Term - 157988 157834  155  0  2   96   37   135 0.841   7.28


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:180130530_180374576|GENSCAN_predicted_peptide_1|796_aa
MRRCNSGSGPPPSLLLLLLWLLAVPGANAAPRSALYSPSDPLTLLQADTVRGAVLGSRSA
WAVEFFASWCGHCIAFAPTWKALAEDVKAQSLVQSRSPLHVHGGQWPEPHRIPNDSVSVE
PSAGAVDPLDSDRGCQPAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFKAFTKNG
SGAVFPVAGADVQTLRERLIDALESHHDTWPPACPPLEPAKLEEIDGFFARNNEEYLALI
FEKGGSYLGREVALDLSQHKGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRNGSVSRVPV
LMESRSFYTAYLQRLSGLTREAAQTTVAPTTANKIAPTVWKLADRSKIYMADLESALHYI
LRIEVGRFPVLEGQRLVALKKFVAVLAKYFPGRPLVQNFLHSVNEWLKRQKRNKIPYSFF
KTALDDRKEGAVLAKKVNWIGCQGSEPHFRGFPCSLWVLFHFLTVQAARQNVDHSQEAAK
AKEVLPAIRGYVHYFFGCRDCASHFEQMAAASMHRVGSPNAAVLWLWSSHNRVNARLAGA
PSEDPQFPKVQWPPRELCSACHNERLDVPVWDVEATLNFLKAHFSPSNIILDFPAAGSAA
RRDVQNVAAAPELAMGALELESRNSTLDPGKPEMMKSPTNTTPHVPAEGPEASRPPKLHP
GLRAAPGQEPPEHMAELQRNEQEQPLGQWHLSKRDTGAALLAESRAEKNRLWGPLEVRRV
GRSSKQLVDIPEGQLEARAGRGRGQWLQVLGGGFSYLDISLCVGLYSLSFMGLLAMYTYF
QAKIRALKGHAGHPAA

>gi568815597f:180130530_180374576|GENSCAN_predicted_CDS_1|2391_bp
atgaggaggtgcaacagcggctccgggccgccgccgtcgctgctgctgctgctgctgtgg
ctgctcgcggttcccggcgctaacgcggccccgcggtcggcgctctattcgccttccgac
ccgctgacgctgctgcaggcggacacggtgcgcggcgcggtgctgggctcccgcagcgcc
tgggccgtggagttcttcgcctcctggtgcggccactgcatcgccttcgccccgacgtgg
aaggcgctggccgaagacgtcaaagcacagagcctggtgcagagtaggagcccactgcac
gttcatggtggccagtggcctgagcctcacaggattccaaatgacagcgtgagtgtagaa
ccttctgctggtgccgtggatcctcttgactcagaccgggggtgtcagccagcctggagg
ccggccctgtatctcgccgccctggactgtgctgaggagaccaacagtgcagtctgcaga
gacttcaacatccctggcttcccgactgtgaggttcttcaaggcctttaccaagaacggc
tcgggagcagtatttccagtggctggtgctgacgtgcagacactgcgggagaggctcatt
gacgccctggagtcccatcatgacacgtggcccccagcctgtcccccactggagcctgcc
aagctggaggagattgatggattctttgcgagaaataacgaagagtacctggctctgatc
tttgaaaagggaggctcctacctgggtagagaggtggctctggacctgtcccagcacaaa
ggcgtggcggtgcgcagggtgctgaacacagaggccaatgtggtgagaaagtttggtgtc
accgacttcccctcttgctacctgctgttccggaatggctctgtctcccgagtccccgtg
ctcatggaatccaggtccttctataccgcttacctgcagagactctctgggctcaccagg
gaggctgcccagaccacagttgcaccaaccactgctaacaagatagctcccactgtttgg
aaattggcagatcgctccaagatctacatggctgacctggaatctgcactgcactacatc
ctgcggatagaagtgggcaggttcccggtcctggaagggcagcgcctggtggccctgaaa
aagtttgtggcagtgctggccaagtatttccctggccggcccttagtccagaacttcctg
cactccgtgaatgaatggctcaagaggcagaagagaaataaaattccctacagtttcttt
aaaactgccctggacgacaggaaagagggtgccgttcttgccaagaaggtgaactggatt
ggctgccaggggagtgagccgcatttccggggctttccctgctccctgtgggtcctcttc
cacttcttgactgtgcaggcagctcggcaaaatgtagaccactcacaggaagcagccaag
gccaaggaggtcctcccagccatccgaggctacgtgcactacttcttcggctgccgagac
tgcgctagccacttcgagcagatggctgctgcctccatgcaccgggtggggagtcccaac
gccgctgtcctctggctctggtctagccacaacagggtcaatgctcgccttgcaggtgcc
cccagcgaggacccccagttccccaaggtgcagtggccaccccgtgaactttgttctgcc
tgccacaatgaacgcctggatgtgcccgtgtgggacgtggaagccaccctcaacttcctc
aaggcccacttctccccaagcaacatcatcctggacttccctgcagctgggtcagctgcc
cggagggatgtgcagaatgtggcagccgccccagagctggcgatgggagccctggagctg
gaaagccggaattcaactctggaccctgggaagcctgagatgatgaagtcccccacaaac
accaccccacatgtgccggctgagggacctgaggcaagtcgacccccgaagctgcaccct
ggcctcagagctgcaccaggccaggagcctcctgagcacatggcagagcttcagaggaat
gagcaggagcagccgcttgggcagtggcacttgagcaagcgagacacaggggctgcattg
ctggctgagtccagggctgagaagaaccgcctctggggccctttggaggtcaggcgcgtg
ggccgcagctccaagcagctggtcgacatccctgagggccagctggaggcccgagctgga
cggggccgaggccagtggctgcaggtgctgggagggggcttctcttacctggacatcagc
ctctgtgtggggctctattccctgtccttcatgggcctgctggccatgtacacctacttc
caggccaagataagggccctgaagggccatgctggccaccctgcagcctga

>gi568815597f:180130530_180374576|GENSCAN_predicted_peptide_2|647_aa
MMQSATVPAEGAVKGLPEMLGVPMQRSRADLAVRAVALLVFYRALVARPPVRASSLRQPY
SCPYGPHRQLVPATSLRAVGTSRSESSQRLTRGRVGYGYGESLPSRLQNSPRGPQQSLHA
SGPCWPAMPSEETRKRARHIGRIPFQPLARAVYHKEGSLEKPGCRPGWPGEQTMNSLNER
LLRTHGRLTILGTRPGIPGVLWVLGDSPVEVDVDRAAGPSRVAGFALTASRSEIPQCAGC
NQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFKACQRHWRIRA
SCRRSLPVLARCFPQPASLQAVGGLSAKGRVQTLKPVLHWRFGTKCTACQQGIPPTQVVR
KAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETAKQNDDSEAGAKRPRTT
ITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRHR
WGQFYKSVKRSRGSSKQEKESSAEDCGVSDSELSFREDQILSELGHTNRIYGNVGDVTGG
QLMNGSFSMDGTGQSYQDLRDGSPYGIPQSPSSISSLPSHAPLLNGLDYTVDSNLGIIAH
AGQGVSQTLRAMAGGPTSDISTGSSVGYPDFPTSPGSWLDEMDHPPF

>gi568815597f:180130530_180374576|GENSCAN_predicted_CDS_2|1944_bp
atgatgcagagtgcgactgtccccgcggaaggggctgtcaaggggctcccggagatgcta
ggtgtgccgatgcaacgctcccgtgcggacttagcagttcgcgccgtagccctcctggtt
ttttaccgcgccttggtcgcgcggcccccggtgcgggcctcgtcgctccgacagccctac
agctgtccctacggcccgcaccgacagctcgtccccgccacctccctccgggctgtaggg
acgtcgagatccgaatcctcacagcgcctgacccggggccgtgttgggtacgggtacggc
gagagccttccgagccgcctccaaaactctccccgcggacctcagcagtccctccacgcg
tcggggccctgctggccggccatgccctctgaggagacgcggaaaagagcgaggcatata
ggaaggatcccgttccagcccctggccagagctgtgtaccacaaagaagggagtttggag
aaacccggatgccggcctgggtggcccggggaacagacgatgaattctttaaatgagcgt
ttgctgcgcacccatgggcggctcacgatcctgggcactcgcccgggaatcccgggcgtg
ctctgggttttgggggactcgccggtggaggtagatgtggacagggcggccggcccttcg
cgggtagccggctttgcgcttactgcgtcccgcagcgagattccccagtgcgctggctgc
aaccagcacatcctggacaagttcatcctgaaggtcctggacagacactggcacagctcc
tgcctcaagtgtgcagactgccagatgcagctggcggacaggtgcttctccagggctggg
agcgtctactgcaaggaggacttcttcaaagcctgccagaggcactggcgcatcagagcc
tcctgccggcgctcccttccagtcctagcccgctgctttcctcagcctgccagtctgcag
gccgtaggtgggctgtccgccaagggcagggtccagaccctcaagcctgtcttgcactgg
cgcttcggcacaaaatgcacggcctgccagcagggtatccccccaacccaggtggtccgc
aaggcccaggactttgtctaccacctgcactgctttgcttgcatcatctgcaaccggcag
ctggccacgggggacgaattctacctcatggaggacgggcggctggtgtgcaaggaagac
tacgagacagccaagcagaacgatgactcagaggctggagctaagcggccccggaccacc
atcacagccaagcagctggagacattaaagaatgcatacaagaactcccccaagcctgcc
cggcacgtgagggagcagctgtcctcagagacaggcctggacatgagggtcgtacaggtt
tggtttcagaacagaagggccaaagagaaacgcctgaagaaggatgcagggcggcaccgc
tgggggcagttctataagagcgtcaagaggagccggggcagcagcaagcaggagaaggag
agctctgcagaggactgtggggttagtgacagtgagctgagcttccgagaggatcaaatt
ctctcagaacttggccacaccaataggatttatggcaacgtgggggacgttacaggcgga
cagttaatgaatgggagcttctccatggacgggacaggacaatcctatcaggacttgagg
gatgggagcccctatggaatcccccagtctccatcctccatatcgtccctgccatcccac
gctcctttgctcaatgggctggattacacggtggacagtaatttgggcatcattgcgcat
gcagggcagggagtaagccagacgctgagagccatggctgggggacccacctctgacatc
tccacaggaagcagtgtaggctatcccgactttccaactagcccaggctcttggctcgat
gaaatggatcatcctcctttttaa

>gi568815597f:180130530_180374576|GENSCAN_predicted_peptide_3|297_aa
MKAEIKMFFETNENKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELE
KQEQTHSKASRRQEITKIRAELKEIETQKTLQKLNESRSWFFEKINKIDRLLARLIKKKR
EKNQIDAIKNDKGDITTNPAEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEE
VESLKRSIIGSEIEAKINSSPTKKSPGPDGFTAEFHQRYKEELVPFLLKLFQSIEKDGIL
PNSFYEASIILLPKPGRDTTKKENFRPISLMNTDAKIINKILANRIQQHIKKLIHHD

>gi568815597f:180130530_180374576|GENSCAN_predicted_CDS_3|894_bp
atgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacacaacataccag
aatctctgggacacattcaaagcagtgtgtagagggaaatttatagcactaaatgcccac
aagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaagaactagag
aagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaagatcagagca
gaactgaaggagatagagacacaaaaaacccttcaaaaactcaatgaatccaggagctgg
ttttttgaaaagatcaacaaaattgatagactgctagcaagactaataaagaagaaaaga
gagaagaatcaaatagatgcaataaaaaatgataaaggggacatcaccaccaatcccgca
gaaatacaaactaccatcagagaatattataaacacctctacgcaaataaactagaaaat
ctagaagaaatggataaattcctcgacacatacaccctcccaagactaaaccaggaagaa
gttgaatctctgaagagatcaataataggatctgaaattgaggcaaaaattaatagctca
ccaaccaaaaaaagtccaggaccagatggattcacagccgaattccaccagaggtacaag
gaggagctggtaccattccttctgaaactattccaatcaatagaaaaagatggaatcctc
cctaactcattttatgaggccagcatcatcctgttaccaaagcctggcagagacacaaca
aaaaaagagaattttagaccaatatccctgatgaatactgatgcaaaaatcatcaataaa
atactggcaaaccgaatccagcagcacatcaagaagcttatccaccatgattaa

>gi568815597f:180130530_180374576|GENSCAN_predicted_peptide_4|57_aa
MATKAKIDKWDLIKLKSFCTAKETTIRVNRQRSLSHSQLPPPPPAHGELCQATADIH

>gi568815597f:180130530_180374576|GENSCAN_predicted_CDS_4|174_bp
atggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcaca
gcaaaagaaactaccatcagagtgaacaggcagaggagcctctcccactcccagttgcca
ccaccaccaccagcccatggagagctctgccaggccactgccgatattcactga

>gi568815597f:180130530_180374576|GENSCAN_predicted_peptide_5|338_aa
MGKKQSRKTGNSKNQSASPPPKERSSSPAMEESWTENDFDELREEGFRRSNYFELKEEVQ
THGKEVKNLEKKLDEWLTRITNAEKSLKDLMELKTMARELRDECTSLSSRFNQLEERVSV
IGDQMNEMKREEKFREKRIKRNEQSLQEIWDYVKRPNLLLIGVPESDGEKGTKLENTLQD
IIQENFPKLARQANIQIQEIQRMPQRYSSRRTTPRHIIVRFTKVEMKEKMLRAAREKGQV
THKGKPVILTADLSAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKSFTDK
QMLRDFVTTRPALQQLLKEALNMERNNRYQPLQKHAKL

>gi568815597f:180130530_180374576|GENSCAN_predicted_CDS_5|1017_bp
atgggaaaaaaacagagcagaaaaactggaaactctaaaaatcagagcgcttctcctcct
ccaaaggaacgcagctcctcaccagcaatggaagaaagctggacggagaatgactttgat
gagttgagagaagaaggcttcagacgatcaaactactttgagctaaaggaggaagtgcaa
acccatggcaaagaagttaaaaaccttgaaaaaaaattagacgaatggctaactagaata
accaatgcagagaagtccttaaaggacctgatggagctgaaaaccatggcacgagaacta
cgtgacgaatgcacaagcctcagtagccgattcaatcaactggaagaaagggtatcagtg
ataggagatcaaatgaatgaaatgaagcgagaagagaagtttagagaaaaaagaataaaa
agaaacgaacaaagcctccaagaaatatgggactacgtgaaaagaccaaatctacttctg
attggtgtacctgaaagtgatggggagaagggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaaactagcaaggcaggccaacattcaaattcaggaaata
cagagaatgccacaaagatactcctcgagaagaacaaccccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcggccagagagaaaggtcaggta
acccacaaagggaagcccgtcatactaacagctgatctctcggcagaaactctacaagcc
aggagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagtgaaggagaaataaaatcctttacagacaag
caaatgctgagagattttgtcaccaccaggcctgctttacaacagctcctgaaggaagca
ctaaacatggaaaggaacaacaggtaccagccactgcaaaaacatgccaaattgtaa

>gi568815597f:180130530_180374576|GENSCAN_predicted_peptide_6|323_aa
MDKFLDTYTLPRLNQEEVESLKRPITGSEIEAKINSSPTKKSPGPDIHSRIPPEVQGGAG
TIPSETIPINRKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILKN
RIQQHIKKLIHCDQVGFIPGMQGWFNIQKSINVIQHINRTNDKNHMIISIDAEKAFDKIQ
QRFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLKMGTRQGCPLSPLLFN
IVLEVLARAIRQEKEIKGIQLGKEEIKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVS
GYKINVQKSQAFLYTNNRQTAKS

>gi568815597f:180130530_180374576|GENSCAN_predicted_CDS_6|972_bp
atggataaattcctcgacacatacaccctcccaagactaaaccaggaagaagttgaatct
ctgaagagaccaataacaggctctgaaattgaggcaaaaattaatagctcaccaaccaaa
aaaagtccaggaccagacattcacagccgaattccaccagaggtacaaggaggagctggt
accattccttctgaaactattccaattaatagaaaagagggaatcctccctaactcattt
tatgaggccagcatcatcctgataccaaagcctggcagagacacaacaaaaaaagagaat
tttagaccaatatccctgatgaacatcgatgcaaaaatcctcaataaaatactgaaaaac
cgaatccagcagcacatcaaaaagcttatccactgtgatcaagtgggcttcatccctggg
atgcaaggctggttcaacatacaaaaatcaataaacgtaatccagcatataaacagaacc
aatgacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaa
caacgcttcatgctaaaaactctcaataaattaggtattgatgggatgtatctcaaaata
ataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactggaa
gcattccctttgaaaatgggcacaagacagggatgccctctctcaccactcctattcaac
atagtgttggaagttctggccagggcaatcaggcaggaaaaggaaataaagggtattcaa
ttaggaaaagaggaaatcaaattgtccctgtttgcagatgacatgattgtatatctagaa
aaccccatcgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctca
gggtacaaaatcaatgtgcaaaaatcacaagcattcttatacaccaataacagacaaaca
gccaaatcatga

>gi568815597f:180130530_180374576|GENSCAN_predicted_peptide_7|57_aa
MLPLLLLLLLLLLLTLIGKGSSSASSCTLLLLLSYTEKRKTLRIIFLKVFQLLGNLY

>gi568815597f:180130530_180374576|GENSCAN_predicted_CDS_7|174_bp
atgctcccgctcctgctcctgctcctgctcctgctcctgcttactctgattggcaaggga
agcagttctgcttcttcatgcacactgttgctccttctttcatatactgagaagaggaag
actttgaggatcatcttcctgaaggtcttccagcttctagggaacctctactga