GENSCAN 1.0	Date run:  3-Nov-116	Time: 07:20:07

Sequence gi568815575r:104150231_104354849 : 204619 bp : 41.48% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   6597   6758  162  2  0   90   47   180 0.295  11.05
 1.02 PlyA +   7459   7464    6                               1.05

 2.00 Prom +   9389   9428   40                              -6.95
 2.01 Init +  16556  16752  197  1  2   84   96   202 0.745  19.05
 2.02 Intr +  25393  25612  220  1  1   60  111    88 0.581   5.68
 2.03 Intr +  35836  35985  150  0  0   35  103   146 0.994  10.24
 2.04 Intr +  36230  36391  162  1  0   72   91   149 0.998  12.85
 2.05 Intr +  37750  38076  327  0  0   63   32   371 0.770  23.97
 2.06 Term +  39378  39548  171  2  0   41   38   275 0.996  14.64
 2.07 PlyA +  41188  41193    6                               1.05

 3.07 PlyA -  42038  42033    6                               1.05
 3.06 Term -  53718  53637   82  2  1  100   53    95 0.118   3.39
 3.05 Intr -  91828  91719  110  1  2   88   93    10 0.015  -0.34
 3.04 Intr -  95160  94900  261  0  0   86   80   114 0.558   7.16
 3.03 Intr - 103534 103390  145  0  1   22   71    77 0.234  -1.24
 3.02 Intr - 104347 103924  424  2  1  102  115   781 0.873  74.20
 3.01 Init - 104619 104538   82  0  1   80   49   163 0.907  12.78
 3.00 Prom - 109550 109511   40                              -3.35

 4.00 Prom + 113222 113261   40                              -4.35
 4.01 Init + 125797 125802    6  0  0   84   49     0 0.220  -3.20
 4.02 Intr + 128575 128713  139  0  1  102   96    94 0.886  10.72
 4.03 Intr + 129107 129352  246  0  0   84   96    98 0.445   6.71
 4.04 Intr + 140810 140971  162  0  0   84   93   187 0.980  17.83
 4.05 Intr + 142399 142674  276  2  0   63   93    61 0.011   0.67
 4.06 Intr + 148835 148888   54  0  0   56   94    53 0.231   0.73
 4.07 Intr + 151833 151873   41  1  2   77   99    49 0.086   1.92
 4.08 Intr + 156020 156095   76  1  1   45   53    98 0.009   0.17
 4.09 Intr + 190701 190811  111  1  0   63   52   161 0.194   9.43
 4.10 Intr + 191813 192012  200  0  2   43   84    57 0.091  -1.05
 4.11 Term + 197895 198029  135  2  0   53   43   108 0.101  -0.16
 4.12 PlyA + 200371 200376    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 141382 141494  113  2  2   64   54    75 0.926  -0.56
S.002 Term - 145625 145472  154  1  1   90   36   170 0.846   8.41
S.003 Init - 146619 146567   53  0  2   60   70    54 0.820   1.48


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:104150231_104354849|GENSCAN_predicted_peptide_1|53_aa
AGSRMCLRPQPIRSATNLRLARCHGGDRRPLSCGLRKQRQSQSPDLRPSAALT

>gi568815575r:104150231_104354849|GENSCAN_predicted_CDS_1|162_bp
gctggaagcaggatgtgtctacgccctcagcccataagaagtgctacaaacctccgcctc
gctcgctgtcatggcggcgaccgacggcccctttcctgtggcctcagaaagcagcgacag
tcgcagtcaccggaccttcgcccatccgccgccctcacttaa

>gi568815575r:104150231_104354849|GENSCAN_predicted_peptide_2|408_aa
MSDEASAITSYEKFLTPEEPFPLLGPPRGVGTCPSEEPGCLDISDFGCQLSSCHRTDPLH
RFHTNRWNLTSCGTSVASSEGSEELFSSVSVGDQDDCYSLLDDQDFTSFDLFPEGSVCSD
VSSSISTYWDWSDSEFEWQLPGSDIASGSDVLSDVIPSIPSSPCLLPKKKNKHRNLDELP
WSAMTNDEQVEYIEYLSRKVSTEMGLREQLDIIKIIDPSAQISPTDSEFIIELNCLTDEK
LKQHFEGRTSRCNTNQFVFVHPKVRNYIKEHSPRQRPAREAWKRSNFSCASTSGVSGASA
SASSSSASMVSSASSSGSSVGNSASNSSANMSRAHSDSNLSASAAERIRDSKKRSKQRKL
QQKAFRKRQLKEQRQARKERLSGLFLNEEVLSLKVTEEDHEADVDVLM

>gi568815575r:104150231_104354849|GENSCAN_predicted_CDS_2|1227_bp
atgtccgacgaggcctcggccatcacttcctacgagaagtttctaacccccgaggagccc
ttcccactcctgggacctcctcgcggggtgggcacctgcccgagcgaggagccgggctgc
ctggacatcagcgacttcggctgccagctgtcctcctgccatcgcaccgacccgctccac
cgcttccacaccaacaggtggaacctaacttcttgtggaacaagtgttgccagctcagaa
ggcagtgaggagctgttttcatctgtgtctgttggagatcaagatgattgctattccctg
ttagatgatcaggacttcacttcttttgatttatttcctgaggggagtgtctgcagtgat
gtctcttcttctattagcacttactgggattggtcagatagcgagtttgaatggcagtta
ccaggcagtgacattgccagtgggagtgatgtactttctgatgtcatacccagtattcca
agttcaccttgcctgcttcctaaaaagaaaaacaagcaccggaatttagatgaactccct
tggagtgcaatgacaaatgatgagcaggtggaatatattgagtatctgagtcggaaagtg
agtactgagatgggtcttcgggagcaacttgatattattaagatcattgatccttctgct
caaatctcccctacagacagtgagtttattattgaacttaactgtctcacagatgaaaaa
ctgaagcagcattttgaaggtagaacatcaaggtgcaacactaaccagtttgtgtttgtg
catcccaaggtcagaaactatatcaaggaacatagccctcgccaacggcctgcaagagag
gcctggaagagaagcaactttagttgtgcaagcaccagtggagtgagcggtgccagtgcc
agcgccagcagcagcagtgccagcatggtcagttctgcaagcagcagtgggtccagtgtt
ggaaactctgcttcaaactccagtgccaacatgagtcgagcacacagtgacagcaacctg
tctgcaagtgcagcagagcggattcgggattcaaaaaagcgatccaagcagcggaagtta
cagcagaaggccttccgcaagaggcagctgaaggagcagaggcaggcccggaaggagagg
ctcagtgggctcttccttaacgaagaggtgctgtccttgaaagtgactgaggaagaccat
gaagcagatgttgatgttttgatgtaa

>gi568815575r:104150231_104354849|GENSCAN_predicted_peptide_3|367_aa
MESLRGYTHSDIGYRSLAVGEDIEEVNDEKLTVTSLMARGGEDEENTRSKPEYGTEAENN
VGTEGSVPSDDQDREGGGGHEPEQQQEEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEG
PQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDESQYPDVVARGRTFELSVASD
PFPSLASSEPSSYRPVVYEGAGLFWPGWNGGRGAPGQMRRHRPRAAEWSAQDSMQSSSQR
RPASVSPWPPLVPRTAQLGAAHTIAGVAPQCVSPPAAQTFFLQGAINSGLLPKPRHWAIL
PLGKLSFLKEKAISPFLGEWRTDCEQTISLESGSFIFSKERASHSMAACFIRASDREDRR
ECQQMIA

>gi568815575r:104150231_104354849|GENSCAN_predicted_CDS_3|1104_bp
atggagtctcttcgcgggtacacccacagtgatattggctaccgcagcctggcagtcggc
gaggacatcgaggaagtgaatgatgagaaacttaccgtgacctcgctgatggcaagggga
ggagaggacgaggagaatacacggtccaaacctgagtacggaacagaagcggaaaacaac
gttggcacggaagggtccgtcccctcggacgaccaagaccgtgagggtggcggcggccac
gagccggagcaacagcaggaggagccgcccctgaccaagccggagcaacagcaggaggag
ccgcccctgctcgagctgaagcaagagcaggaggagccgccccagacgaccgtggagggg
ccacagccggcggaggggccacaaaccgctgagggaccacagcccccagagaggaaacgc
cgccgccgcaccgcgttcacgcagtttcagctgcaggagctagagaactttttcgatgaa
tctcaatatcccgacgttgtggcgcgggggcggacttttgagctttcggtagccagcgac
ccctttccttcgctagcctcatcggagccctcctcataccgacccgtagtgtacgaaggg
gcaggccttttctggccaggctggaatggggggcggggggcacctggacagatgaggaga
cacaggcccagagcagcggaatggtctgcccaagatagcatgcagagttcatcccagaga
aggccagcttctgtatcgccatggcctcccttggtgcccaggactgcccagctaggggca
gcacataccattgcaggtgtagctcctcagtgcgtatcacctccagctgcccagaccttt
ttccttcaaggggctataaactcagggctcctccccaagcctcggcactgggccatttta
cctctaggaaaactttcctttttaaaagagaaagcaatctccccttttctaggtgaatgg
aggacagactgtgaacaaaccatatcattggaatctggaagcttcatattttcaaaagaa
agagcatctcatagcatggcagcttgctttatcagagccagcgaccgagaggacagaaga
gaatgccagcaaatgattgcatga

>gi568815575r:104150231_104354849|GENSCAN_predicted_peptide_4|481_aa
MGTISSVKAETSCVLFTVISPVPSTVPDTYQTLSKYVWNEEMKNLDLKEAISKHERFHQL
SMPRPLSSFLAVDLITKEKIEASKKEFLVQSSGATQLTKLCTKFCNYQGLEFDKCKVAEM
RLERWTGSRSGLALELSVFEELLDSTVPYKQLPTDCQSAAWFVDDGSMVNGQHPIWKDAT
LIKEGVTGLQLLKVGMISRKASARIPKGLVEVGCAKLGLTVNVTIFPGDKNSPLVLHLCH
LNLSKWEWTEGKYLLKTSIAVCNLDQHSGDSNIPSKDNHSNLGIQCVEDGRATRATSLRQ
LMTSLVTQISLVDAVNLHFFIGKVEITSTSQHCYQTCQLATEPGVAVIGIALLGQGSIIV
FRRFLLKTHISAFYKELQQSGIYITSFPVDGICSKQSSMYNFITLESISDHGSVTPYIGN
RVFFRMYFFQGKPLPSENVRVLTINVVVTLTTREEKTLGQLVLRWLKPYPFYGEGESEKA
V

>gi568815575r:104150231_104354849|GENSCAN_predicted_CDS_4|1446_bp
atggggactataagctctgtgaaggcagagacctcctgtgtcttgttcactgttatatct
ccagtgcccagcacagtgcctgacacataccagactctcagtaaatatgtgtggaatgaa
gagatgaaaaatttagatctgaaggaggctatttcaaaacatgagcgatttcatcaattg
tctatgccacgacccctctcatccttcttagcagttgatctcataaccaaagagaaaata
gaggccagcaagaaagaatttcttgtccagagctctggggcaactcagctaactaagctc
tgtacaaaattctgtaattaccagggcctagagtttgacaaatgtaaagtggcagagatg
aggttggagaggtggacagggtccagatcaggactggctctggaactgtctgtgtttgag
gagctgctggattctacagtaccctataagcaactcccaacagactgtcaaagtgctgct
tggtttgtggatgacggttccatggtgaatggacaacatcctatttggaaggatgccact
ctgatcaaagaaggggtcacaggactacagctgctgaaagtaggaatgatttctaggaaa
gcttctgccagaattcctaagggtctggtggaggtggggtgtgcaaaattgggactaaca
gtgaatgtcactatattccctggtgataaaaatagcccactagtactgcacttatgtcac
ctcaacctatctaaatgggaatggaccgagggaaagtacttgttaaagactagtattgct
gtctgcaatctagaccagcacagtggtgattctaacatcccttccaaagacaaccatagt
aaccttggaattcagtgtgttgaagatggaagagctacaagagcaacaagtcttcgtcag
ttgatgacatcactcgtcactcagatctctctcgtggatgctgtaaacctccatttcttc
atcggaaaagtggagataacatcaacctcgcagcattgttatcaaacctgtcagcttgct
acagaacctggagttgctgtcattggcatcgccctactgggccaaggctctatcattgtc
ttccgaaggtttctgctgaaaacacacatttccgccttctataaggagcttcagcagagt
ggtatttacattacctcttttcctgtcgatggaatctgtagcaaacagagcagcatgtat
aattttatcacacttgagagcatttctgaccatggatctgtcactccttacatagggaat
agagtttttttcaggatgtacttctttcagggaaagcctttacccagtgagaatgtccgg
gttttaacgataaatgttgtggtcaccctaaccacaagagaagagaaaacacttggtcag
ttagttctgaggtggctgaagccatacccattttatggtgaaggagaatctgaaaaggct
gtataa