GENSCAN 1.0	Date run:  3-Nov-116	Time: 08:20:03

Sequence gi568815575r:111201690_111510398 : 308709 bp : 38.96% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2778   2886  109  2  1   79  -57   182 0.063   3.23
 1.02 Intr +  12244  12326   83  2  2   51   67    63 0.273  -1.06
 1.03 Intr +  14732  14869  138  1  0   70   67   157 0.802  11.54
 1.04 Term +  18669  18758   90  2  0  113   47    34 0.609  -1.46
 1.05 PlyA +  18805  18810    6                               1.05

 2.04 PlyA -  18931  18926    6                               1.05
 2.03 Term -  21553  21423  131  2  2   97   42    60 0.268  -0.34
 2.02 Intr -  29649  29545  105  1  0   51  106    38 0.065   1.17
 2.01 Init -  41713  41491  223  1  1   66   39   174 0.172   9.06
 2.00 Prom -  41957  41918   40                              -6.65

 3.13 PlyA -  42234  42229    6                               1.05
 3.12 Term -  45070  44888  183  1  0  144   35   216 0.989  18.46
 3.11 Intr -  45815  45679  137  0  2   68  110   102 0.998   9.77
 3.10 Intr -  46303  46182  122  0  2   91   69   163 0.999  13.92
 3.09 Intr -  47082  46880  203  0  2   97   31   144 0.976   6.76
 3.08 Intr -  47368  47246  123  1  0  101   93   148 0.999  16.46
 3.07 Intr -  49414  49228  187  0  1   95   36   238 0.999  18.07
 3.06 Intr -  49597  49520   78  0  0   81   73   123 0.996   7.85
 3.05 Intr -  50053  49860  194  1  2   86   82   247 0.983  21.27
 3.04 Intr -  50810  50618  193  1  1   56   68   219 0.635  15.27
 3.03 Intr -  51527  51319  209  2  2   91   78   111 0.999   7.35
 3.02 Intr -  52714  52583  132  1  0   83   62    80 0.965   4.82
 3.01 Init -  62247  62083  165  0  0   61   93   135 0.973  10.98
 3.00 Prom -  66485  66446   40                              -5.35

 4.04 PlyA -  66786  66781    6                               1.05
 4.03 Term -  68751  68589  163  2  1   13   33   272 0.440  10.63
 4.02 Intr -  69264  69092  173  0  2   70   69    78 0.287   1.92
 4.01 Init -  71402  71316   87  2  0   70   86    53 0.605   3.99
 4.00 Prom -  81697  81658   40                              -3.75

 5.10 PlyA -  81967  81962    6                               1.05
 5.09 Term -  95672  95537  136  1  1   58   47   119 0.036   1.31
 5.08 Intr - 100054  99941  114  0  0  111   42    68 0.028   3.14
 5.07 Intr - 110730 110586  145  1  1   77   26    62 0.001  -2.68
 5.06 Intr - 129352 129215  138  2  0   95  113   181 0.956  20.81
 5.05 Intr - 131464 131362  103  1  1   97  103   129 0.999  14.13
 5.04 Intr - 138763 138618  146  2  2   74   53   103 0.005   4.48
 5.03 Intr - 151129 151021  109  1  1  115   30    59 0.013   1.74
 5.02 Intr - 167307 167272   36  0  0   87   84    42 0.045   1.24
 5.01 Init - 170487 170398   90  0  0   84   70    60 0.040   4.34
 5.00 Prom - 178118 178079   40                              -3.85

 6.07 PlyA - 178194 178189    6                               1.05
 6.06 Term - 184713 184544  170  1  2   81   53    98 0.754   2.66
 6.05 Intr - 194424 194292  133  0  1    2  100    98 0.865   1.70
 6.04 Intr - 199641 199301  341  1  2   88   96   425 0.911  37.57
 6.03 Intr - 208731 208346  386  2  2  104   86   575 0.916  52.47
 6.02 Intr - 209457 209420   38  0  2  114   36    63 0.597  -0.16
 6.01 Init - 215023 214883  141  1  0   81   44   119 0.485   6.98
 6.00 Prom - 225626 225587   40                              -1.65

 7.00 Prom + 228822 228861   40                              -7.95
 7.01 Sngl + 233120 233335  216  1  0   68   43   350 0.871  23.42
 7.02 PlyA + 233954 233959    6                               1.05

 8.05 PlyA - 234553 234548    6                               1.05
 8.04 Term - 242857 242721  137  2  2   77   41    75 0.531  -1.10
 8.03 Intr - 243194 243093  102  0  0   91  100    89 0.941   9.63
 8.02 Intr - 266397 266314   84  1  0   42   93    71 0.443   1.87
 8.01 Init - 269479 269272  208  1  1  110   50   138 0.848  11.48
 8.00 Prom - 270941 270902   40                              -5.65

 9.07 PlyA - 271467 271462    6                               1.05
 9.06 Term - 274670 274459  212  0  2   24   37   215 0.750   6.47
 9.05 Intr - 276730 276579  152  0  2  115   54    81 0.547   6.29
 9.04 Intr - 281189 281095   95  2  2   38   33    95 0.045  -3.16
 9.03 Intr - 293084 293030   55  1  1  103   61    64 0.102   3.26
 9.02 Intr - 305880 305774  107  0  2   16   89    81 0.079  -0.91
 9.01 Intr - 307513 307364  150  1  0   36   81   123 0.434   5.84

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 246361 246325   37  1  1   80   78    36 0.829   2.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:111201690_111510398|GENSCAN_predicted_peptide_1|139_aa
MECDDRHLRTEMPMHVFYPMAFEICVFANEELFYQEIKTGFVTDLYVGMEVLIAATCISC
SSMKALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPL
SSLTPLIIAAKEAIKNSSR

>gi568815575r:111201690_111510398|GENSCAN_predicted_CDS_1|420_bp
atggagtgtgatgatcggcatttgcgcactgaaatgcccatgcacgtgttttatcctatg
gcttttgaaatctgtgtttttgccaatgaagaattattttaccaagaaatcaaaactgga
tttgtcactgacttgtatgttggcatggaggtcctaatagctgccacctgcatttcctgt
tcatcaatgaaggcattgtatctgatagccactaatggaactccagagctccagaatcct
gagagactgtcagctgtattccgtgactttttaaatcgctgtcttgagatggatgtggat
aggcgaggatctgccaaggagcttttgcagcatccatttttaaaattagccaagcctctc
tccagcctgactcctctgattatcgctgcaaaggaagcaattaagaacagcagccgctaa

>gi568815575r:111201690_111510398|GENSCAN_predicted_peptide_2|152_aa
MKTLEENLGNTIQGIGMGKDFMTKTPKAMATKAKIDKRDLIKLNSVFTAKETIISMNRQP
TELEKFFAIYLSDKGRKMSHPITVGHSVYSSQQEIKEKSPGHHPYVCQQRHFGINIERCA
LVISGHTSNIKDLDRLTCVKMSLKIQGKRINC

>gi568815575r:111201690_111510398|GENSCAN_predicted_CDS_2|459_bp
atgaaaaccctagaagaaaacctaggcaataccattcagggcataggcatgggcaaagat
ttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaacgggatcta
attaaactaaacagcgtcttcacagcaaaagaaactatcatcagcatgaacaggcaacct
acagaattggagaaattttttgcaatctatctatctgacaaaggaagaaaaatgagtcac
cctatcacagtgggccacagtgtatactctagtcaacaggaaattaaagaaaagtcacca
ggccaccatccatatgtttgccagcaaagacattttggaatcaacattgaaagatgtgcc
ctcgttatctcagggcacactagcaacatcaaagatttggatagactcacctgtgtcaag
atgagcttaaaaatccagggaaagagaataaactgttaa

>gi568815575r:111201690_111510398|GENSCAN_predicted_peptide_3|641_aa
MGPPLKLFKNQKYQELKQECIKDSRLFCDPTFLPENDSLFYNRLLPGKVVWKRPQDICDD
PHLIVGNISNHQLTQGRLGHKPMVSAFSCLAVQESHWTKTIPNHKEQEWDPQKTEKYAGI
FHFRFWHFGEWTEVVIDDLLPTINGDLVFSFSTSMNEFWNALLEKAYAKLLGCYEALDGL
TITDIIVDFTGTLAETVDMQKGRYTELVEEKYKLFGELYKTFTKGGLICCSIESPNQEEQ
EVETDWGLLKGHTYTMTDIRKIRLGERLVEVFSAEKVYMVRLRNPLGRQEWSGPWSEISE
EWQQLTASDRKNLGLVMSDDGEFWMSLEDFCRNFHKLNVCRNVNNPIFGRKELESVLGCW
TVDDDPLMNRSGGCYNNRDTFLQNPQYIFTVPEDGHKVIMSLQQKDLRTYRRMGRPDNYI
IGFELFKVEMNRKFRLHHLYIQERAGTSTYIDTRTVFLSKYLKKGNYVLVPTMFQHGRTS
EFLLRIFSEVPVQLRELTLDMPKMSCWNLARGYPKVVTQITVHSAEDLEKKYANETVNPY
LVIKCGKEEVRSPVQKNTVHAIFDTQAIFYRRTTDIPIIVQVWNSRKFCDQFLGQVTLDA
DPSDCRDLKSLYLRKKGGPTAKVKQGHISFKVISSDDLTEL

>gi568815575r:111201690_111510398|GENSCAN_predicted_CDS_3|1926_bp
atgggtcctcctctgaagctcttcaaaaaccagaaataccaggaactgaagcaggaatgc
atcaaagacagcagacttttctgtgatccaacatttctgcctgagaatgattctcttttc
tacaaccgactgcttcctggaaaggtggtgtggaaacgtccccaggacatctgtgatgac
ccccatctgattgtgggcaacattagcaaccaccagctgacccaagggagactggggcac
aagccaatggtttctgcattttcctgtttggctgttcaggagtctcattggacaaagaca
attcccaaccataaggaacaggaatgggaccctcaaaaaacagaaaaatacgctgggata
tttcactttcgtttctggcattttggagaatggactgaagtggtgattgatgacttgttg
cccaccattaacggagatctggtcttctctttctccacttccatgaatgagttttggaat
gctctgctggaaaaagcttatgcaaagctgctaggctgttatgaggccctggatggtttg
accatcactgatattattgtggacttcacgggcacattggctgaaactgttgacatgcag
aaaggaagatacactgagcttgttgaggagaagtacaagctattcggagaactgtacaaa
acatttaccaaaggtggtctgatctgctgttccattgagtctcccaatcaggaggagcaa
gaagttgaaactgattggggtctgctgaagggccatacctataccatgactgatattcgc
aaaattcgtcttggagagagacttgtggaagtcttcagtgctgagaaggtgtatatggtt
cgcctgagaaaccccttgggaagacaggaatggagtggcccctggagtgaaatttctgaa
gagtggcagcaactgactgcatcagatcgcaagaacctggggcttgttatgtctgatgat
ggagagttttggatgagcttggaggacttttgccgcaactttcacaaactgaatgtctgc
cgcaatgtgaacaaccctatttttggccgaaaggagctggaatcggtgttgggatgctgg
actgtggatgatgatcccctgatgaaccgctcaggaggctgctataacaaccgtgatacc
ttcctgcagaatccccagtacatcttcactgtgcctgaggatgggcacaaggtcattatg
tcactgcagcagaaggacctgcgcacttaccgccgaatgggaagacctgacaattacatc
attggctttgagctcttcaaggtggagatgaaccgcaaattccgcctccaccacctctac
atccaggagcgtgctgggacttccacctatattgacacccgcacagtgtttctgagcaag
tacctgaagaagggcaactatgtgcttgtcccaaccatgttccagcatggtcgcaccagc
gagtttctcctgagaatcttctctgaagtgcctgtccagctcagggaactgactctggac
atgcccaaaatgtcctgctggaacctggctcgtggctacccgaaagtagttactcagatc
actgttcacagtgctgaggacctggagaagaagtatgccaatgaaactgtaaacccatat
ttggtcatcaaatgtggaaaggaggaagtccgttctcctgtccagaagaatacagttcat
gccatttttgacacccaggccattttctacagaaggaccactgacattcctattatagta
caggtctggaacagccgaaaattctgtgatcagttcttggggcaggttactctggatgct
gaccccagcgactgccgtgatctgaagtctctgtacctgcgtaagaagggtggtccaact
gccaaagtcaagcaaggccacatcagcttcaaggttatttccagcgatgatctcactgag
ctctaa

>gi568815575r:111201690_111510398|GENSCAN_predicted_peptide_4|140_aa
MAFILGKSVECTVRQIVCEALERERKSLGSLPEVLITITDLPTRAMSDQGHVCSLAHINF
ANTSPFFSACPLSSNVHVCDINPGTENSSGNGSSSSSSSSSSSRAPGITQVSREGIRKLT
LEFYFLDNLASKKDEETSTL

>gi568815575r:111201690_111510398|GENSCAN_predicted_CDS_4|423_bp
atggcatttatccttggcaaaagtgtagaatgcactgttaggcagatcgtttgtgaggct
ttagaaagggagcggaaatcactagggtcacttcctgaagtcctcatcactatcacagat
ctgcctaccagggccatgtctgaccagggccatgtctgcagcctagcccatattaacttt
gccaacacttcaccatttttctctgcatgtcctctctctagtaatgtgcatgtctgtgat
attaaccctgggacagaaaacagcagcggcaacggcagcagcagcagcagcagcagcagc
agcagcagcagggctcctgggataactcaggtgagtagagagggaattcgcaaacttacc
ctggagttttatttcctggataacttagcgtctaagaaagatgaagaaacttcaactttg
tag

>gi568815575r:111201690_111510398|GENSCAN_predicted_peptide_5|338_aa
MMAYLIAGISQSHDGNGIVKNTIDTDACTKPSRQPIVEPCDHLSLTVTGGATLVLADSSL
SCFFPGAGTFLTEIQKAAELPGRKAKSAGLQRLQTPLLLQVQAHGDQSSAPEPLTRVNKV
PAGNPHPVTCLHDFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASP
TPQKTSAKSPGPMRRSKSPADSGNDQDALLPKGFQKVSKANEVTKPCFGTWVEHLSPQFR
DIAKGVFRALYVTRHQTCTCLCPWMTRTRLVIPCKGGESAQSPEYKSKPIIVVGTREQDA
YIPKMSSRTLMGMIPKITPPQKRLCQETSPDRNTGTVV

>gi568815575r:111201690_111510398|GENSCAN_predicted_CDS_5|1017_bp
atgatggcttatcttattgctggtatttctcaaagtcatgatggaaatggcattgttaag
aacacaatagatacagatgcttgtaccaagccaagcagacagcctattgtggaaccttgt
gatcatctttcactgacagtcacaggaggagcaactcttgtgctagctgatagttcattg
agttgtttcttccctggggctggcacctttctcacagagattcaaaaggcagcagaacta
ccaggaagaaaggctaagtctgctggtctacagagactgcagacccccttactcctacag
gttcaggcccacggagatcagagttctgcccctgagcctctgactagagttaataaagtt
cctgcagggaatccccacccagtaacttgtctccatgatttctttggtgatgatgatgtg
tttattgcctgtggtcctgaaaaatttcgctatgctcaggatgatttttctctggatgaa
aatgaatgccgagtcatgaagggaaacccatcagccacagctggcccaaaggcatcccca
acacctcagaagacttcagccaagagccctggtcctatgcgccgaagcaagtctccagct
gactcaggtaacgaccaagacgcacttcttccaaagggtttccaaaaggtctccaaagct
aatgaggtaaccaaaccatgctttgggacatgggttgaacacttgtctccccagttcaga
gacatagcaaagggggtgttcagggcactttatgtcaccaggcaccagacctgtacctgc
ctctgtccttggatgactcggactcgcttggtgattccatgtaaaggaggggagagtgct
cagagtccagagtacaaatccaagcctatcattgtagtagggacaagagaacaggatgcc
tatatccccaaaatgagctccaggacactgatgggaatgatcccaaagatcaccccacct
cagaaacgtctgtgccaagagacttccccagatagaaacactgggacagtggtttga

>gi568815575r:111201690_111510398|GENSCAN_predicted_peptide_6|402_aa
MAKGEVGAGTSHGKSWSKSERTRERENKRAREQESERTRERENKRARLISYECRIAAPAW
SLRFHQNMELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAK
KVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKI
GSMDELEEGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQAREN
KDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDG
KQYSRKDLPFPRCHTKELGAVSTKAIAGNTARQIGFNLGNVECTYQDIFLAWSGAGTWTP
EEITVTEQAKKIHTHIPTQLNSAGCGSVHRAVWRLATPQGPC

>gi568815575r:111201690_111510398|GENSCAN_predicted_CDS_6|1209_bp
atggcaaaaggcgaagtgggagcaggcacttcacatggcaaaagctggagcaagagcgag
agaacaagagagcgagagaacaagagagcgagagaacaagagagcgagagaacaagagag
cgagagaacaagagagcgagacttatttcttatgaatgtcggatagctgcaccagcttgg
tctctgaggttccaccaaaatatggaacttgattttggacactttgacgaaagagataag
acatccaggaacatgcgaggctcccggatgaatgggttgcctagccccactcacagcgcc
cactgtagcttctaccgaaccagaaccttgcaggcactgagtaatgagaagaaagccaag
aaggtacgtttctaccgcaatggggaccgctacttcaaggggattgtgtacgctgtgtcc
tctgaccgttttcgcagctttgacgccttgctggctgacctgacgcgatctctgtctgac
aacatcaacctgcctcagggagtgcgttacatttacaccattgatggatccaggaagatc
ggaagcatggatgaactggaggaaggggaaagctatgtctgttcctcagacaacttcttt
aaaaaggtggagtacaccaagaatgtcaatcccaactggtctgtcaacgtaaaaacatct
gccaatatgaaagccccccagtccttggctagcagcaacagtgcacaggccagggagaac
aaggactttgtgcgccccaagctggttaccatcatccgcagtggggtgaagcctcggaag
gctgtgcgtgtgcttctgaacaagaagacagcccactcttttgagcaagtcctcactgat
atcacagaagccatcaaactggagaccggggttgtcaaaaaactctacactctggatgga
aaacagtattctaggaaagacttgccctttccacgttgccatacaaaagaactgggtgct
gtaagcacaaaggcaattgcaggaaacacagcaagacagattggatttaaccttggaaat
gttgaatgcacttaccaagatatttttctggcttggtccggggctggcacttggactcca
gaggaaataactgttactgagcaagctaaaaaaattcacacacacattcccactcagctt
aacagcgctggctgtggttcagttcaccgagcggtatggaggttggctactccacaggga
ccttgctga

>gi568815575r:111201690_111510398|GENSCAN_predicted_peptide_7|71_aa
MWNNTAADNKQPCERKAAKLKEKYDKDIVVHGAKGKPDAAKKKAVGAEKSKKKNEEEKDE
EDDVEEEDDHE

>gi568815575r:111201690_111510398|GENSCAN_predicted_CDS_7|216_bp
atgtggaataacactgctgcagacaataagcagccatgtgaaaggaaggctgcaaagctg
aaggaaaaatatgacaaggatatcgttgtacacggagctaaaggaaagcctgatgcagca
aaaaagaaagccgttggggctgagaaaagcaagaaaaagaatgaagaggagaaagatgaa
gaggatgatgttgaggaggaagatgatcatgaataa

>gi568815575r:111201690_111510398|GENSCAN_predicted_peptide_8|176_aa
MGVKPRKATGVELPKVLGAHILHKCGLDVGHEIKGDYFEALRFSDLPVGFQTCMGLISPF
FWLISPFQNELLSARSQPTQRDDSAKLTGTQKAHWQHCKKYRSQYSKKLSASYVQGRHST
VTRDPRRSESQVLLLVTDNHKGHQQKSFSEGKHRLPELLVAERKVLIDLFFWVTKG

>gi568815575r:111201690_111510398|GENSCAN_predicted_CDS_8|531_bp
atgggggttaagccccgcaaagccacaggggtggagctgcccaaggtcttgggagcccac
atcttgcacaagtgtggcctggatgtgggccatgaaatcaaaggggattactttgaagct
ttaaggtttagtgaccttcctgttggctttcagacttgcatggggcttatatcccctttc
ttttggctgatttctccctttcagaatgagcttctaagtgccagatctcagccaactcaa
cgagatgactctgcaaagctaacaggaacccagaaagcccattggcagcactgcaagaag
tatcgaagccagtactcaaaaaaattgagtgccagctatgtacaaggaaggcatagtact
gtcaccagagaccctcgaaggtcggaatcacaagtcttgcttcttgtcactgacaatcat
aaaggacaccagcagaaaagcttctcagagggaaaacacaggttaccagaactcttggtg
gctgagagaaaagttctgattgatttatttttctgggtaactaaaggataa

>gi568815575r:111201690_111510398|GENSCAN_predicted_peptide_9|256_aa
VSQVTVEGSSVTEAFEEPTEEPKTQRVGSHSTKEEMTNPLPLFPTPISTLTFIRNGNIWL
RLYTVTDPNTVPIFIIHIDDLGTLGNASLYTFQVKVKDRMMSLRASYIRVCRLFEVVTIL
PVTGDFTTRMQPKQCGPPYSLRNSNTEIRPTNNPMMASTRSSERKSYISHSKSKARNNLS
EKGMMKDIIKNVCGSWEEVKISTLTGVWKKLIPTLTDDFEGFKASGEEVTADVEIARELE
LEFEYEDVTEFLQSYD

>gi568815575r:111201690_111510398|GENSCAN_predicted_CDS_9|771_bp
gtctcccaagttacagtagaggggtcttcagtgacagaggcctttgaagaacccacagaa
gagccaaagacccagagagtgggaagccattccaccaaggaagaaatgaccaatccctta
cctctcttccctactcctatttccaccctgacatttataaggaatggcaatatctggctt
cgactatatactgtgactgatccaaatactgttcccatcttcatcattcacattgatgac
cttgggaccttgggcaatgcatccctctacacatttcaggtgaaggtaaaggaccgaatg
atgtccctgagggcctcatacatccgagtgtgtaggctttttgaagttgtgaccatactt
cctgtcacaggtgactttacaactagaatgcagccaaaacagtgtgggcctccctattcc
ctgagaaacagcaatactgaaattaggccaactaataaccctatgatggcctctacgcgt
tcaagtgaaaggaagtcctacatctctcactcgaaatcaaaagctagaaataaccttagt
gagaaaggcatgatgaaagatatcattaagaatgtctgtggctcatgggaggaggtcaaa
atatcaacattaacaggagtttggaagaagttaattccaaccctcacggatgactttgaa
ggattcaaggcttcaggtgaggaagtaactgcagatgtggaaatagcaagagaactagaa
ttagaatttgagtatgaagatgtgactgaatttctgcaatcttatgattaa