GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:15:41

Sequence gi568815578f:56529545_56738010 : 208466 bp : 48.16% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3798   4046  249  2  0   78  116   118 0.569   9.22
 1.02 Intr +   6628   6824  197  0  2   94   77    97 0.984   7.41
 1.03 Intr +   7020   7169  150  0  0   69   10   115 0.002   1.08
 1.04 Intr +  29663  29844  182  2  2   32   71    93 0.008   1.51
 1.05 Intr +  44962  45076  115  2  1  100   64    30 0.126   1.31
 1.06 Intr +  45606  45757  152  0  2   93    9    87 0.199   1.11
 1.07 Intr +  50305  50429  125  2  2   70   37    62 0.268  -0.40
 1.08 Intr +  50657  50791  135  1  0  111   98    61 0.644  10.16
 1.09 Intr +  65519  65586   68  1  2   81   77     5 0.004  -3.60
 1.10 Intr +  72303  72515  213  0  0   42   26   240 0.002  11.03
 1.11 Intr +  77112  77186   75  0  0   69  109    69 0.604   5.73
 1.12 Intr +  79314  79431  118  0  1   74   84    12 0.152  -0.13
 1.13 Intr +  97725  97856  132  2  0   71   82    22 0.007   0.74
 1.14 Intr +  99737 100155  419  1  2   48   52   279 0.151  13.12
 1.15 Intr + 101237 101444  208  2  1   22   18   189 0.126   4.38
 1.16 Intr + 101661 102312  652  2  1  129   94   746 0.846  70.78
 1.17 Intr + 103809 104025  217  1  1   89   75    69 0.610   3.26
 1.18 Intr + 104606 104724  119  2  2   39   86    45 0.344  -0.49
 1.19 Intr + 107066 107210  145  0  1   59  100    53 0.792   2.94
 1.20 Term + 108184 108469  286  1  1   63   38   229 0.721  10.28
 1.21 PlyA + 109711 109716    6                               1.05

 2.00 Prom + 122338 122377   40                              -4.96
 2.01 Init + 135012 135095   84  2  0  101   72    64 0.518   6.92
 2.02 Intr + 138046 138163  118  0  1   41   76    54 0.218  -0.46
 2.03 Intr + 143467 143559   93  2  0  103   83    16 0.208   2.54
 2.04 Intr + 154061 154190  130  0  1  129   52    71 0.933   7.35
 2.05 Term + 156342 156606  265  0  1   53   45   189 0.698   6.08
 2.06 PlyA + 157740 157745    6                               1.05

 3.09 PlyA - 157753 157748    6                               1.05
 3.08 Term - 159686 159561  126  2  0  112   48    90 0.852   5.68
 3.07 Intr - 168715 168603  113  2  2   78   72    81 0.009   5.60
 3.06 Intr - 171460 171247  214  1  1  -21  -85   348 0.009   4.89
 3.05 Intr - 171989 171801  189  2  0   81   44   177 0.644  12.38
 3.04 Intr - 173117 173013  105  2  0   52  105    31 0.445   1.61
 3.03 Intr - 174110 174008  103  1  1   61   32   119 0.704   3.78
 3.02 Intr - 177178 176861  318  0  0   59  113    89 0.686   3.57
 3.01 Init - 179783 179587  197  2  2   72   70    58 0.669   1.00
 3.00 Prom - 192569 192530   40                              -4.76

 4.00 Prom + 197012 197051   40                              -4.26
 4.01 Init + 205411 205578  168  0  0   57   76   153 0.804  10.53
 4.02 Intr + 207073 207125   53  0  2   59  110    80 0.683   5.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 171460 171224  237  1  0  -21   36   331 0.986  13.17


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:56529545_56738010|GENSCAN_predicted_peptide_1|1318_aa
MWTLKSSLVLLLCLTCSYAFMFSSLRQKTSEPQGKVPCGEHFRIRQNLPEHTQGWLGSKW
LWLLFAVVPFVILQCQRDSEKNKEQSPPGLRGFPFRTPLKKNQNASLYKDCVFNTLNELE
VELLKFVSEVQNLKGAMATGSGSNLKLRRRKSEWETSSHSSDGFVFASLMSSRAVDGEES
TESYIIVRDELVLPCNGRGEVLEHKVEMGVLAVAEEVGAGGATVSGNEFLKLAGPTKMQI
LRQFLQLSCGRSEDPTPSPETRPEGLLKNALGNNCFSRTLFGFPLAGWNPLCAAFAGSPL
PAGFGTHCPSSQIHSCQGHQEYPVHSTTGTSMSSRDGSSQLHLTQLTQERTNDPHALLFG
KGNEGFRTVGTGHPQGLFKQPKLLLQNLGTYTRGKRSRGIPCWKYPSPEGCWQNHHLIQN
KKSAPGAPESVKKNKVSPTGLYLQMPRTWDIMQRPSTWNRLKYVLTGNEVKKICMQRFIK
INGKVRTDITYSAGFMDVNSIDKSGENFRLIYDTKGRFAVHRITPEEAKAGSLVLPHPCP
EQKNPEEAFGQSRRGLIQLMGAFENLNVALAKNSWTLHPPFLHLPYSMYLYDSTLPGGEA
YRFLRAALASVAVGKESQGLGWGMSTFLPIPGPSVQEALGSPGYRQDTLFGRGFPRPRSG
LDTRGGSIYARRAADACPVTRTARPARGGGGGRRLVTVTPILDLPLGGWGDPGFNWRLFW
GTPDAMLWKITDNVKYEEDCEVSWGSGVQPRPAEDSPGGRGHWTEVGDEGIGALASRPCV
MGGLHEIALHRASGSFAPGSGSFAPGSGHGLFWPKTQGSDLAPPSASGLGAAPRPSPPGF
ENSFPQDRHDGSSNGNPRVPHLSSAGQHLYSPAPPLSHTGVAEYQPPPYFPPPYQQLAYS
QSADPYSHLGEAYAAAINPLHQPAPTGSQQQAWPGRQSQEGAGLPSHHGRPAGLLPHLSG
LEAGAVSARRDAYRRSDLLLPHAHALDAAGLAENLGLHDMPHQMDEVQVSGAAAPDRTCS
PYGLLPPPRTPLGSPELKGILSSLPQNVDDQHLLLHDQTVIRKGPISMTKNPLNLPCQKE
LVGAVMNPTEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSK
NGGRSLREKLDKIGLNLPAGRRKAAHVTLLTSLVEGEAVHLARDFAYVCEAEFPSKPVAE
YLTRPHLGGRNEMAARKNMLLAAQQLCKEFTELLSQDRTPHGTSRLAPVLETNIQNCLSH
FSLITHGFGSQAICAAVSALQNYIKEALIVIDKSYMNPGDQSPADSNKTLEKMEKHRK

>gi568815578f:56529545_56738010|GENSCAN_predicted_CDS_1|3957_bp
atgtggacgctgaaatcgtccctggtcctgcttctgtgcctcacctgcagctatgccttt
atgttctcttctctgagacagaaaactagcgaaccccaggggaaggtgccgtgtggagag
cactttcggattcggcagaacctaccagagcacacccaaggctggcttgggagcaaatgg
ctctggcttttgtttgctgttgtgccgtttgtgatactgcagtgtcaaagagacagtgag
aagaataaggagcagagtcctcctggccttcgaggcttcccatttcgcactccactaaag
aaaaatcaaaatgcttctctttacaaagactgtgtattcaataccttaaacgaacttgaa
gtggagcttttgaaatttgtgtccgaagtgcagaatcttaaaggtgccatggcaacaggc
agtggcagtaacctcaagcttcgaagaagaaaaagtgaatgggagaccagtagccatagc
agtgatggttttgtttttgcctctctcatgtcatctagagctgtggatggtgaggagagc
accgaaagctacataatagtacgtgatgagctcgtgcttccgtgcaatggccgcggggag
gtgttggaacacaaggtggaaatgggtgtgttggcggtggctgaggaagtcggggcagga
ggagccactgtttctgggaatgaattcctgaaacttgctggtcccaccaagatgcaaatc
ttgcggcagtttttacagttatcctgtggaagaagtgaggatcccactccaagcccagag
acaagacctgaaggattgctaaagaatgcccttggtaacaactgtttctccaggaccttg
tttggcttccccctggctgggtggaacccgctgtgtgcagccttcgcagggagcccactt
ccagctggctttggcacccactgtccctcctctcagattcactcttgtcaaggtcaccag
gaatacccggtgcacagtacaacaggcacttccatgtcctcgcgggatgggtcttcccag
ctgcacttgacgcagctgacccaggagagaaccaacgaccctcatgcattgctttttggc
aagggaaatgaaggattcaggacagtgggcactgggcacccacagggtttattcaagcag
ccgaagctcctgcttcagaaccttggcacgtacacccgtgggaagaggagtcggggcatc
ccttgctggaaataccccagccctgaaggttgctggcaaaaccaccatttaattcagaac
aaaaagtctgctccaggagcccctgagagcgtcaaaaagaacaaggtttcccccactgga
ctttacctccagatgcccaggacatgggacatcatgcaaagacctagcacgtggaacaga
cttaagtatgtcctcactggaaatgaagtaaagaagatttgcatgcagcggttcattaag
atcaatggcaaggtccgtactgatataacctactctgctggattcatggatgtcaacagc
attgacaagtcgggagagaatttccgtctgatctatgacaccaagggtcgctttgctgta
catcgtattacacctgaggaggccaaggctgggagcctggtgctgccacacccttgccct
gagcagaagaatccggaagaagcctttggccagagccgcaggggtctaattcaattgatg
ggagcatttgagaacctaaatgtagcattagctaaaaactcttggacactacaccctccc
ttcttgcatttaccctatagcatgtacctgtatgattctacgctcccaggcggggaggca
tatcggttcctccgggcagctttggctagtgttgctgtgggaaaggagagccagggcctg
ggatgggggatgagcaccttcttgcccattccgggccccagcgtgcaggaggcgctcggg
tcccccggctatcgccaggacacactgttcgggcgcggctttccccgtccgcggagcggt
cttgacactcgcggcggcagcatctacgctcgcagagccgccgatgcgtgtccagtgacc
cggacagcaaggcccgcgcgcggcgggggcggcggcagacgcctggtcaccgtgaccccg
attttggatttaccgcttgggggctggggggatcctggatttaactggcgactgttttgg
gggacgccggacgccatgttgtggaaaataaccgataatgtcaagtacgaagaggactgc
gaggtgagctggggctccggggtgcagccccgccccgccgaggacagtccgggaggcagg
ggccactggaccgaggtcggggacgagggcataggagccctggcctctcgtccctgcgtc
atgggcgggctccacgagatagctctgcaccgggcgtccggctccttcgccccgggctct
ggctccttcgccccgggctccggccacggacttttctggcccaagacccagggttcggac
ttggcgcctccaagcgcctcgggcttgggagcagcgcctagaccttcgccgccgggcttt
gagaactcgttcccccaggatcgccacgacgggagcagcaatgggaatccgcgggtcccc
cacctctcctccgccgggcagcacctctacagccccgcgccacccctctcccacactgga
gtcgccgaatatcagccgccaccctactttccccctccctaccagcagctggcctactcc
cagtcggccgacccctactcgcatctgggggaagcgtacgccgccgccatcaaccccctg
caccagccggcgcccacaggcagccagcagcaggcctggcccggccgccagagccaggag
ggagcggggctgccctcgcaccacgggcgcccggccggcctactgccccacctctccggg
ctggaggcgggcgcggtgagcgcccgcagggatgcctaccgccgctccgacctgctgctg
ccccacgcacacgccctggatgccgcgggcctggccgagaacctggggctccacgacatg
cctcaccagatggacgaggtgcaggtgagcggcgctgcggctcctgaccggacctgttca
ccctacggccttctgcccccaccccgcactcctctaggctcccccgaacttaagggaatt
ttgtcctctctcccccagaatgtcgacgaccagcacctgttgctgcacgatcagacagtc
attcgcaaaggtcccatttccatgaccaagaaccctctgaacctcccctgtcagaaggag
ctggtgggggccgtaatgaaccccactgaggtcttctgctcagtccctggaagattgtcg
ctcctcagctctacgtctaaatacaaagtgacagtggctgaagtacagaggcgactgtcc
ccacctgaatgcttaaatgcctcgttactgggaggtgttctcagaagagccaaatcgaaa
aatggaggccggtccttgcgggagaagttggacaagattgggttgaatcttccggccggg
aggcggaaagccgctcatgtgactctcctgacatccttagtagaaggtgaagctgttcat
ttggctagggactttgcctatgtctgtgaagccgaatttcctagtaaaccagtggcagaa
tatttaaccagacctcatcttggaggacgaaatgagatggcagctaggaagaacatgcta
ttggcggcccagcaactgtgtaaagaattcacagaacttctcagccaagaccggacaccc
catgggaccagcaggctcgccccagtcttggagacgaacatacagaactgcttgtctcat
ttcagcctgattacccacgggtttggcagccaggccatctgtgccgcggtgtctgccctg
cagaactacatcaaagaagccctgattgtcatagacaaatcctacatgaaccctggagac
cagagtccagctgattctaacaaaaccctggagaaaatggagaaacacaggaaataa

>gi568815578f:56529545_56738010|GENSCAN_predicted_peptide_2|229_aa
MEGQKDLGSILKAELTELADELDGLRSRTLFWVLRTQQKEIGPQAVHPGEDPDSSHNGRV
KCTECSQVCPVTRLHPCSVHSKARTGILTDPGGLKSPFSVGSYCQVMLPLCGSLAQVQNP
DPVDTDASFYFGNLESECGYTGVLLYHHSITPNQDVPAWTPIVLILSSLEEEASPGAAVD
PGSLPNDPGSCGPLVPQESGSCLEAPTKSWPGSRLPSQLAEDGAIWLRF

>gi568815578f:56529545_56738010|GENSCAN_predicted_CDS_2|690_bp
atggagggccagaaagacctgggaagtattttgaaggcggagctgacagaacttgctgat
gagttggatgggctcaggagcaggacactgttctgggtgctgaggacacagcagaaagag
attggccctcaggcggttcatcctggtgaggacccagacagctcacacaacggacgtgta
aaatgcactgagtgttcccaggtgtgccctgtgacaaggcttcacccttgctctgttcac
agcaaagcacgcacgggcatcctgactgatcctggaggtttgaaatcaccttttagtgtg
ggctcttattgccaggtgatgctgcctctctgtggatccctggctcaggtgcagaatcct
gacccagtggacactgacgcaagcttctattttggaaatctggaatctgaatgtggatac
actggggttcttctgtaccatcactcaataactcccaaccaggatgtgcctgcctggacc
cccatcgtgctcatcctgagcagcttggaggaagaggcctcccctggggcagcagtcgac
ccagggtctctgccaaatgaccctggcagctgcggccccctcgtgccccaggagtcaggg
tcctgtctggaggctccaaccaaaagctggcccgggtcccgactgccctctcagctggca
gaggatggagccatttggctccgcttctga

>gi568815578f:56529545_56738010|GENSCAN_predicted_peptide_3|454_aa
MEETLPAFWVRDPSPEDLPLPPCLAVTPESKRGGGGSSLRQRSWPPSHRMLHSAMSPAIP
LVRGPDPCGILRAGAKQIVLFHELGDKHVTQSNPKTHKETDTGIPGRFLLLPSSGIRKPM
WPWSSWPPSCEMGKCGANTEERETSSFCSARALHPAFPKARFDSPLAYDSVTSSTERSER
TLPEVKLFDQILRMLHNTEEGSGGDQKRKLMLVEALGKTSGMSTKWEHCYSKGLLLSLPL
LITCVPHVRRSRAHQLLDHHQDLKEKEEVVEEVDNERDAPTNRNTNEGNGEEEADHEVDK
EGKKKRKKVERKGEEEEVDGEEEDGDKDEEAEAAEGKLAAENDQDDNIVTKKQKTNEDDQ
AAKKENSNFKKTLPASWVLYQVLSTDNLPSLYPETGSSKDEVTLPKSCSPKYQETFLILP
DKVSSTGAAACLTFNDFSPKLPAGPVCHGGRPTP

>gi568815578f:56529545_56738010|GENSCAN_predicted_CDS_3|1365_bp
atggaggaaaccctcccagcattttgggtcagagaccctagccctgaagacctgcccctg
cccccgtgtctggctgtgaccccagagagcaagcgaggaggaggaggctcatcactgcgc
cagcggtcctggcccccgagccaccggatgctacattcggctatgtccccagcaatcccc
ctggtccgtgggccagacccatgcggaatattgagagccggagccaagcagatcgttctg
ttccatgagctcggggataagcacgtgacccagtctaacccaaagactcacaaggagact
gacactgggatccccggaaggttcttgctgcttccttcttctggaatcaggaagcccatg
tggccctggagctcctggccgccatcttgtgagatgggaaaatgtggggccaatacagag
gagagagaaacctcatccttttgttcagctagagccctgcatccagctttccctaaagcc
agatttgattcacctctggcttatgattctgtcacctcctccacagagagaagtgaaagg
acactccccgaggtgaagctctttgaccagattttgcggatgctgcacaacactgaggaa
gggagtgggggagaccagaaaaggaaactaatgctggtggaggctttaggaaaaacgtcg
gggatgtccactaaatgggaacattgctattcgaagggccttctgttgtcgttgccactc
ctgatcacctgtgtgccccatgtcagacgcagccgtgcacaccagctcctagatcaccac
caagacttaaaggagaaggaggaagttgtggaggaggtggacaatgaaagagatgcccct
actaacaggaatactaatgagggcaatggggaggaggaggctgaccatgaggtagacaaa
gaagggaagaagaagaggaagaaagtggagaggaagggggaggaggaggaagttgatggt
gaggaagaagatggagataaagatgaggaagctgaggctgctgagggcaaactggctgct
gaaaatgatcaggatgacaatattgttaccaagaagcagaagaccaatgaggatgaccag
gcagccaaaaaggaaaattcaaacttcaagaaaaccttgccggccagctgggtgctgtac
caggtactttccacagacaaccttccgagcctttacccagaaactgggtcttcgaaagat
gaagtgactttgccaaagtcatgcagccctaagtaccaggaaactttcctgatcctccca
gacaaggtcagcagcaccggggccgctgcttgcctgacattcaacgacttttcacccaaa
ctccccgcggggcctgtctgccacggtggacgtccaactccataa

>gi568815578f:56529545_56738010|GENSCAN_predicted_peptide_4|74_aa
MWTLIVSPYLGVTTVLDKIMPVKGVPVSEKMAITQRLALANVKLQTEISALKESLRLSPA
QIGSTGFEGHVYSS

>gi568815578f:56529545_56738010|GENSCAN_predicted_CDS_4|222_bp
atgtggacgttaatagtatctccttacctcggggtcaccacggtattggataaaataatg
ccagtaaaaggtgtcccagtatcagagaagatggccattactcaaaggcttgctctagca
aatgtcaagctacagacagaaatcagcgctctcaaggagagcttgaggctgagtcccgca
cagatcggcagcaccggttttgaaggccacgtgtactccagn