GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:47:18

Sequence gi568815595r:15311259_15526511 : 215253 bp : 44.90% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  13159  13236   78  0  0   73   77    86 0.234   5.75
 1.02 Term +  18433  18477   45  0  0  115   54    21 0.101  -1.39
 1.03 PlyA +  18757  18762    6                               1.05

 2.03 PlyA -  19108  19103    6                               1.05
 2.02 Term -  19308  19210   99  0  0  111   41   121 0.581   7.83
 2.01 Init -  21150  21013  138  0  0   70   91   286 0.268  25.24
 2.00 Prom -  30161  30122   40                              -4.26

 3.00 Prom +  36877  36916   40                              -3.36
 3.01 Init +  40726  40773   48  0  0   77   78    57 0.504   4.72
 3.02 Term +  61468  61608  141  0  0   66   44   152 0.826   6.53
 3.03 PlyA +  61625  61630    6                              -0.45

 4.03 PlyA -  62844  62839    6                               1.05
 4.02 Term -  64426  64115  312  1  0   42   45   409 0.310  27.00
 4.01 Init -  75741  75739    3  0  0  108   81     0 0.405   1.30
 4.00 Prom -  80725  80686   40                              -2.46

 5.02 PlyA -  81486  81481    6                               1.05
 5.01 Sngl -  85352  84963  390  2  0   88   54   284 0.951  21.22
 5.00 Prom -  95167  95128   40                              -4.96

 6.05 PlyA -  95765  95760    6                               1.05
 6.04 Term - 100179  99998  182  1  2   71   43   107 0.804   2.27
 6.03 Intr - 102904 102763  142  1  1   79   95    22 0.889   1.93
 6.02 Intr - 104684 104514  171  2  0   95   96   101 0.982  11.74
 6.01 Init - 112754 112689   66  2  0   79   80    25 0.239  -0.13
 6.00 Prom - 114304 114265   40                              -5.56

 7.00 Prom + 115150 115189   40                              -4.36
 7.01 Init + 116255 116384  130  1  1   64   63    48 0.453  -0.40
 7.02 Intr + 116418 116624  207  1  0   91   81   154 0.527  14.05
 7.03 Intr + 118655 118749   95  0  2  114   76    53 0.997   6.38
 7.04 Intr + 120829 120965  137  0  2   39   95   120 0.966   7.17
 7.05 Intr + 123090 123280  191  0  2  121   65   172 0.999  17.43
 7.06 Intr + 125084 125317  234  0  0   80   89   209 0.993  17.86
 7.07 Term + 129305 129333   29  0  2  115   43    -7 0.240  -4.26
 7.08 PlyA + 131331 131336    6                               1.05

 8.15 PlyA - 132136 132131    6                               1.05
 8.14 Term - 140455 140386   70  0  1   81   55   170 0.888  10.41
 8.13 Intr - 142673 142571  103  0  1  106   45   143 0.998  11.03
 8.12 Intr - 144761 144641  121  2  1   67   75    96 0.954   6.27
 8.11 Intr - 145321 145202  120  1  0   49   80   152 0.878  11.19
 8.10 Intr - 147067 146928  140  2  2   74   79    50 0.648   2.88
 8.09 Intr - 155179 155083   97  1  1   91  110    34 0.852   5.48
 8.08 Intr - 159358 159278   81  1  0  133  110    63 0.993  12.83
 8.07 Intr - 162777 162742   36  0  0   91  106     6 0.653   1.16
 8.06 Intr - 163014 162970   45  0  0  106   90    37 0.922   4.31
 8.05 Intr - 163693 163667   27  1  0  109   96    -1 0.662   1.11
 8.04 Intr - 164229 164167   63  0  0   83   86    48 0.831   3.01
 8.03 Intr - 165939 165868   72  0  0   70  110     1 0.472   0.10
 8.02 Intr - 167745 167700   46  2  1  111   65    43 0.866   2.71
 8.01 Init - 170740 170337  404  1  2   60   39   173 0.501   5.70
 8.00 Prom - 172663 172624   40                              -4.96

 9.08 PlyA - 172789 172784    6                              -0.45
 9.07 Term - 173489 173002  488  0  2   17   38   297 0.980  12.46
 9.06 Intr - 173942 173780  163  2  1   80   71    47 0.974   1.75
 9.05 Intr - 176512 176354  159  1  0   51   85    45 0.458   0.68
 9.04 Intr - 177049 176948  102  1  0   48   77    57 0.171   0.97
 9.03 Intr - 178379 178267  113  0  2   34  117    54 0.235   3.00
 9.02 Intr - 182338 182168  171  2  0    0  100    82 0.137   0.51
 9.01 Init - 187329 187254   76  0  1   84   92    59 0.508   5.16
 9.00 Prom - 196580 196541   40                               0.04

10.03 PlyA - 196654 196649    6                               1.05
10.02 Term - 201163 201003  161  2  2   82   48    45 0.048  -2.00
10.01 Init - 210367 210262  106  1  1   95   99    36 0.491   5.37

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:15311259_15526511|GENSCAN_predicted_peptide_1|40_aa
CPTQDLLQEGLQANVYFNQISPVYKKKQTLPTAPCIGKLR

>gi568815595r:15311259_15526511|GENSCAN_predicted_CDS_1|123_bp
tgccccacacaggatttgctgcaggaaggcctccaggccaatgtttacttcaaccagatc
tcacctgtgtacaagaagaaacagactttgccaacagctccctgcattgggaaactgcgc
tga

>gi568815595r:15311259_15526511|GENSCAN_predicted_peptide_2|78_aa
MDAALKRSRSEEPAEILPPARDEEEEEEEGMEQGLEEEEEVDPRIQGELEKLNQSTDDIN
RRETELEVQRAEFLFLVK

>gi568815595r:15311259_15526511|GENSCAN_predicted_CDS_2|237_bp
atggacgcggcactgaagcggagccgctcggaggagccagccgaaatcctgccgcctgcc
cgggacgaggaggaggaggaggaagaggggatggagcaggggctggaggaggaagaagag
gtggatccccggatccagggagaactggagaagttaaatcagtccacggatgatatcaac
agacgggagactgaacttgaggtacagagagctgagttcctgttcttggtgaagtga

>gi568815595r:15311259_15526511|GENSCAN_predicted_peptide_3|62_aa
MVDALAACTLYLEKPQAAKSPPVHAIETATRAIGALTYPEPPLLPSPQYPTIARPTIAYY
TY

>gi568815595r:15311259_15526511|GENSCAN_predicted_CDS_3|189_bp
atggtggatgcactggcagcttgcaccctgtacctggaaaagccacaggcagccaagagc
ccacctgttcatgctattgaaacagccaccagagccattggggcccttacttacccagag
ccacccctgctgccctcgccccagtaccctaccattgcaaggcccacaattgcctactat
acctactga

>gi568815595r:15311259_15526511|GENSCAN_predicted_peptide_4|104_aa
MHLRPAAVAIAAATMPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKASA
KKGEKVPKGKKGKADAGKEGNNPAENGDAKTDQSQKAEGAGDAK

>gi568815595r:15311259_15526511|GENSCAN_predicted_CDS_4|315_bp
atgcacctacgtcccgccgccgtcgccatcgccgcggccaccatgcccaagagaaaggct
gaaggagatgctaaaggagataaagccaaggtgaaggacgaaccgcagagaagatccgct
aggttgtctgctaaacctgctcctccaaagccagagcccaagcctaaaaaggcctctgca
aagaagggagagaaggtacccaaagggaaaaagggaaaggctgatgctggcaaggagggg
aataaccctgcagaaaatggagatgccaaaacagaccagtcacagaaagctgaaggtgct
ggagatgccaagtga

>gi568815595r:15311259_15526511|GENSCAN_predicted_peptide_5|129_aa
MGKKQSRKTENSKNQSASPPPKERSSSPAMEQSWTENDFDELREEGFRQSNYSELKEEVR
THGKEVKNLEKRLDEWLTRITSVEKPLNDLMELKTMAQELRDKCTSLSSRFNQLEERVSV
MEDQMNEMK

>gi568815595r:15311259_15526511|GENSCAN_predicted_CDS_5|390_bp
atggggaaaaaacagagcagaaaaactgaaaattctaaaaatcagagcgcctctcctcct
ccaaaggaacgcagctcctcaccagcaatggaacaaagctggacggagaatgactttgat
gagttgagagaagaaggcttcagacaatcaaactactctgagctaaaggaggaagttcga
acccatggcaaagaagttaaaaaccttgaaaaaagattagacgaatggctaactagaata
accagcgtagagaagcccttaaatgacctgatggagctgaaaaccatggcacaagaacta
cgtgacaaatgcacaagcctcagtagccgattcaatcaactggaagaaagggtatcagtg
atggaagatcaaatgaatgaaatgaaatga

>gi568815595r:15311259_15526511|GENSCAN_predicted_peptide_6|186_aa
MVSNSWAQVINLPQPPKMLGLQQNPLYDTERCKVFQCDLTKDDLLDHVPPESVDVVMLIF
VLSAVHPDKMHLVLQNIYKVLKPGKSVLFRDYGLYDHAMLRFKASSKLGENFYVRQDGTR
SYFFTDDFLAQLFMDTGYEEVVNEYVFRETVNKKEGLCVPRVFLQSKFLKPPKNPSPVVL
GLDPKS

>gi568815595r:15311259_15526511|GENSCAN_predicted_CDS_6|561_bp
atggtctcaaactcctgggctcaggtgatcaacctgcctcagcctcccaaaatgctggga
ttacagcaaaatcctttatatgatacagaaagatgcaaggtattccagtgtgatctgact
aaagatgatcttctggatcatgtaccgccagagtctgtggatgttgttatgttgatattt
gtgctgtcagctgttcatcctgataagatgcaccttgtcttacaaaacatttacaaggta
ttaaaaccaggcaaaagtgtcttgtttcgtgactacggactgtatgatcatgccatgctt
aggtttaaagccagcagcaaacttggagaaaacttttatgttagacaagatgggaccaga
tcatatttttttactgatgacttcctggctcagctctttatggacacaggttatgaagaa
gtggtaaacgagtatgtgtttcgagagacggtgaataaaaaagaaggcctgtgtgtgcca
agagttttccttcagagcaaatttctaaagcctcctaagaacccatctcctgtggtcctg
ggcctggatcctaagtcctga

>gi568815595r:15311259_15526511|GENSCAN_predicted_peptide_7|340_aa
MAPPPPLPLGTRKFLPDAGSPTALPPQIPLSPPRRGENLLLDPERWPGSTVLPDASARSS
DRGCTGRAPIWVRGRCGAMNGTANPLLDREEHCLRLGESFEKRPRASFHTIRYDFKPASI
DTSCEGELQVGKGDEVTITLPHIPGSTPPMTVFKGNKRPYQKDCVLIINHDTGEYVLEKL
SSSIQVKKTRAEGSSKIQARMEQQPTRPPQTSQPPPPPPPMPFRAPTKPPVGPKTSPLKD
NPSPEPQLDDIKRELRAEVDIIEQMSSSSGSSSSDSESSSGSDDDSSSSGGEDNGPASPP
QPSHQQPYNSRPAVANGTSRPQGSNQLMNTLTSGGEAVWT

>gi568815595r:15311259_15526511|GENSCAN_predicted_CDS_7|1023_bp
atggcaccgcccccgccacttccgctaggaacccggaagttcctacccgacgccggaagt
cccacggccttgcctcctcagattcctctctcacccccacgcagaggagagaacttgctt
ctggacccggagcggtggcccggaagcacagtcctcccagacgccagcgccagaagctcg
gatcgcggctgcaccgggagagcgccgatctgggtgcgaggcaggtgcggggccatgaat
gggaccgcaaacccgctgctggaccgcgaggaacattgcctgaggctcggggagagcttc
gagaagcggccgcgggcctccttccacactattcgttatgattttaaaccagcatctata
gacacttcctgtgaaggagagcttcaagttggcaaaggagatgaagtcacaattacactg
ccacatatccctggatccacaccacccatgactgtgttcaaggggaacaaacggccttac
cagaaagactgtgtgcttattattaatcatgacactggtgaatatgtgctggaaaaactc
agtagcagcattcaggtgaagaaaacaagagctgagggcagcagtaaaatccaggcccga
atggaacagcagcccactcgtcctccacagacgtcacagccaccaccacctccaccacct
atgccattcagagctccaacgaagcctccagttggacccaaaacttctcccttgaaagat
aacccctcacctgaacctcagttggatgacatcaaaagagagctgagggctgaagttgac
attattgaacaaatgagcagcagcagtgggagcagctcttcagactctgagagctcttcg
ggaagtgatgacgatagctccagcagtggaggcgaggacaatggcccagcctctcctccg
cagccttcacaccagcagccctacaacagtaggcctgccgttgccaatggaaccagccgg
ccacaaggaagcaaccagctcatgaacaccctcactagtggaggggaagcagtctggact
tag

>gi568815595r:15311259_15526511|GENSCAN_predicted_peptide_8|474_aa
MSELPFTIASKRIKYLGIKLTRDVKDLFKENCKPLLNEMKENRNKWKNIPCSWIGRINIV
KMAILPKVIYRFSAIPIKLPMTFFTELEKTTLNFIWNQKRDHIAKTILSQKKKAGGITLP
DFKLYYKATVTKTAWGSLADQEGRYGLRCSGRPGPPGVPGMPGPIGWPGPEGPRGEKGDL
GMMGLPGSRGPMGSKGYPGSRGEKGSRGEKGDLGPKGEKGFPGFPGMLGQKGEMGPKGEP
GIAGHRGPTGRPGKRGKQGQKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAGQLIMGPKGE
RGFPGPPGRCLCGPTMNVNNPSYGESVYGPSSPRVPVIFVVNNQEELERLNTQNAIAFRR
DQRSLYFKDSLGWLPIQLTPFYPVDYTADQHGTCGDGLLQPGEECDDGNSDVGDDCIRCH
RAYCGDGHRHEGVEDCDGSDFGYLTCETYLPGSYGDLQCTQYCYIDSTPCRYFT

>gi568815595r:15311259_15526511|GENSCAN_predicted_CDS_8|1425_bp
atgagtgagctcccattcacaattgcttcaaagagaataaaatacctaggaatcaaactt
acaagggatgtgaaggacctcttcaaggagaactgcaaaccactgctcaatgaaatgaaa
gagaacagaaacaaatggaagaacattccatgctcatggataggaagaatcaatattgtg
aaaatggccatactgcccaaggtaatttatagattcagtgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaacttcatatggaaccaaaaaaga
gaccacattgccaagacaatcttaagccaaaagaagaaagctggaggcatcacactacct
gacttcaaactatactacaaggctacagtaaccaagacagcatgggggagcttggccgac
caggaaggaaggtatggtctgcgctgttctggtagacctggccccccaggtgttcctggc
atgcctgggcccatcggttggccaggccctgaaggacccaggggtgaaaaaggtgacctg
ggtatgatgggcttgccagggtcaagaggaccaatgggctccaagggctaccctggatcc
agaggggaaaagggatccagaggtgaaaagggtgacctgggtcccaaaggagaaaagggt
ttcccaggatttcctggaatgttggggcagaaaggtgaaatgggtccaaaaggtgaacct
gggatagcaggacaccgaggacccacaggaagaccaggaaaacgaggcaagcagggacag
aaaggggatagtggagttatgggcccaccaggcaagcctgggccttctggtcaacctggc
cgtccggggcccccaggccccccacctgcaggacaacttataatgggacccaaaggggaa
agaggatttcccgggcctccaggaagatgtctttgtggacccactatgaatgtgaataac
ccttcctacggggaatctgtgtatgggcccagttccccgcgagttcctgtgatttttgtg
gtcaacaaccaggaggagcttgagaggctgaacacccaaaacgccattgccttccgcaga
gaccagagatctctgtacttcaaggacagccttggctggctccccatccagctgacccct
ttctaccctgtggattacactgcagaccagcacggcacctgtggggatgggctcctgcag
cctggggaggagtgtgacgacggtaacagcgatgtgggtgacgactgcatccgctgtcac
cgtgcctactgtggagatggtcaccggcatgagggtgtggaggactgtgacggctctgac
tttggctacctgacatgcgagacctatctccctgggtcatatggagacctgcaatgcacc
cagtactgctacatcgactccacgccctgccgctacttcacctga

>gi568815595r:15311259_15526511|GENSCAN_predicted_peptide_9|423_aa
MTGSSFSLAHLLIISGLLCYSAGCLDPQGDVPDKADGGGKRGEARLGQPSWRDGREDAKE
DGMDQMHRKKHKRGDGGQGIEEALPSLDQKKRGGHKACCLLTPPPPPLFPPPFFRGGRSP
LLSPDMKNLMLELETSQSPCMQGSLGSPGPPGPQVLLPSSPPLPTKAKGETVKMLQKGFL
DKQEYPPETPPHRVLAPLACLQEGAPSPPLVIPRQTGSGVDLQQTPTDLQQRVLTVRRKT
NKQKGHLHQNPICTSPSSKTKARELHNTCTSFSSQFNHVEERVSVIEDQMNEMKREEKFR
EKRVRRNEQSLQEIWDYVKRPNLRLIGVPESDGENGIKLENTLQDIIQEYFPNLARQANI
QIEEIQRTPQRYSSRRACLSRVPEGSTKHGKEQLVPATTKSYQTVKTINTMKKLHQLMSK
ITS

>gi568815595r:15311259_15526511|GENSCAN_predicted_CDS_9|1272_bp
atgacgggctcatcattcagcctcgctcatctgctcatcatttcaggactgctctgttac
tcggcaggctgcttggacccacaaggggatgttccagacaaagcagatgggggaggtaaa
agaggtgaggcaagactgggtcagccgtcatggagagatgggcgtgaagacgccaaagag
gatggaatggatcagatgcacagaaagaagcataaaaggggagatgggggacaggggatc
gaggaagcccttcccagcctggatcagaagaagcgtggtggccacaaagcatgctgcctg
ctgacgcctcctccaccaccactgttcccaccaccattcttcagaggtggccgaagtccg
cttctctccccagacatgaagaatctcatgctggaactggagacctcgcagtccccgtgc
atgcaaggctcgctaggctcccctgggcctcccggcccccaggtattgctaccaagcagc
ccacccctccccaccaaagctaaaggggaaacagtcaaaatgctgcagaaaggatttcta
gacaaacaagagtaccctccagagaccccaccccacagagtcctggcccctctggcctgc
ctccaagagggtgctccatcgcctccactggtgatacccaggcaaacagggtctggagtg
gacctccagcaaactccaacagacctgcagcagagggtcctgactgttagaaggaaaact
aacaaacagaaaggacatctacaccaaaatcccatctgtacatcaccatcatcaaagacc
aaagcacgagaactacacaacacatgcacaagcttcagtagccaattcaatcatgtggaa
gaaagggtatcagtgattgaagatcaaatgaatgaaatgaagcgagaagagaagtttaga
gaaaaaagagtaagaagaaatgaacaaagcctccaagaaatatgggactatgtgaaaaga
ccaaatctacgtctgattggtgtacctgaaagtgacggggagaatggaatcaagttggaa
aacactcttcaggatattatccaggagtacttccccaacctagcaaggcaggccaacatt
caaattgaggaaatacagagaacgccacaaagatactcctcaagaagagcctgcctttca
agagttcctgaaggaagcactaaacatggaaaggaacaactggtaccagccaccacaaaa
tcataccaaacggtaaagaccatcaacaccatgaagaaactgcatcaactaatgagcaaa
ataacaagctaa

>gi568815595r:15311259_15526511|GENSCAN_predicted_peptide_10|88_aa
MVVLNPMTLGIYLQLFFLSIVSQPTFINSVLPISAAQEHLAPFKPALISHGNQHKHRHGA
RVWELVTAEGEASWLLQALHHQPAAGCK

>gi568815595r:15311259_15526511|GENSCAN_predicted_CDS_10|267_bp
atggttgtcctgaatccaatgactttgggaatttatcttcagcttttcttcctctctatc
gtgtctcagccgactttcatcaacagcgttcttccaatctcagcagcccaggagcattta
gctccattcaagcccgcacttatctctcatggcaaccagcataaacacaggcatggggcg
cgtgtttgggagctggtgacagctgaaggagaggcctcgtggctgctacaggctttgcac
catcaaccagctgcgggctgcaaatga