GENSCAN 1.0	Date run:  4-Nov-116	Time: 13:55:29

Sequence gi568815577f:36599747_36845270 : 245524 bp : 46.49% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  20496  20751  256  2  1   55   40   183 0.624   7.59
 1.02 Term +  20994  21721  728  1  2   28   49   291 0.332  12.84
 1.03 PlyA +  21763  21768    6                              -1.75

 2.00 Prom +  21803  21842   40                              -1.86
 2.01 Init +  25354  25411   58  0  1   84   53    50 0.628   2.57
 2.02 Term +  27264  27367  104  1  2  108   44   145 0.805  10.54
 2.03 PlyA +  28019  28024    6                              -0.45

 3.11 PlyA -  28230  28225    6                               1.05
 3.10 Term -  31139  31115   25  1  1   71   49    44 0.164  -3.50
 3.09 Intr -  33376  33228  149  1  2  100   78    80 0.652   7.23
 3.08 Intr -  40380  40260  121  2  1   51   27   118 0.263   2.50
 3.07 Intr -  41126  41030   97  0  1   82   74    37 0.152   0.77
 3.06 Intr -  43264  43151  114  2  0  104   57    41 0.369   3.02
 3.05 Intr -  54152  54014  139  2  1  -12   70    86 0.008  -3.16
 3.04 Intr -  66511  66414   98  2  2   85   99    75 0.772   8.03
 3.03 Intr -  71826  71733   94  0  1  119  100    43 0.865   8.14
 3.02 Intr -  81418  81356   63  1  0   76  100    32 0.381   2.11
 3.01 Init -  86516  86511    6  2  0   81   89     4 0.243   0.54
 3.00 Prom -  89719  89680   40                              -5.66

 4.00 Prom +  92136  92175   40                              -4.66
 4.01 Init +  95210  95359  150  1  0   59   64    81 0.113   2.85
 4.02 Intr +  97568  97622   55  1  1   53   90    61 0.187   1.35
 4.03 Intr +  98168  98244   77  0  2   79  116    -3 0.279   0.83
 4.04 Intr +  98905  99028  124  0  1   96   20   119 0.317   6.06
 4.05 Intr +  99336  99633  298  1  1   73   57   139 0.056   5.23
 4.06 Intr +  99991 100175  185  1  2  -52  100   347 0.035  21.33
 4.07 Intr + 101097 101179   83  1  2   65   43    27 0.382  -4.74
 4.08 Intr + 105121 105433  313  0  1   85   36   226 0.947  12.86
 4.09 Intr + 107373 107639  267  1  0   43   72   129 0.275   4.30
 4.10 Intr + 109422 109504   83  1  2  101   80    61 0.906   5.96
 4.11 Intr + 112787 112876   90  1  0   97   94    12 0.856   2.89
 4.12 Intr + 119830 119988  159  0  0   57   84    38 0.516   0.48
 4.13 Intr + 120075 120183  109  2  1   99   61   132 0.964  11.46
 4.14 Intr + 123299 123384   86  0  2  104  102    14 0.982   3.94
 4.15 Intr + 126373 126572  200  0  2  116  109   287 0.993  31.75
 4.16 Intr + 131299 131405  107  1  2  101   75   223 0.967  22.16
 4.17 Intr + 141971 142118  148  0  1   81  113   213 0.996  22.39
 4.18 Intr + 143641 143809  169  1  1  113   92    98 0.998  12.65
 4.19 Intr + 144919 145390  472  0  1   46   98   353 0.487  24.75
 4.20 Term + 147919 148346  428  2  2  121   46   611 0.985  55.67
 4.21 PlyA + 149221 149226    6                               1.05

 5.05 PlyA - 149589 149584    6                               1.05
 5.04 Term - 154671 154500  172  2  1  119   38   216 0.896  17.00
 5.03 Intr - 157009 156796  214  2  1   85   82   294 0.999  26.27
 5.02 Intr - 160095 159981  115  0  1   80  111    76 0.999   9.12
 5.01 Init - 160425 160378   48  0  0   52  121    32 0.448   3.85
 5.00 Prom - 163981 163942   40                              -1.46

 6.00 Prom + 177006 177045   40                              -0.96
 6.01 Init + 182806 182946  141  0  0   76   61    55 0.224   1.73
 6.02 Intr + 186205 186274   70  0  1  135   44    52 0.201   4.25
 6.03 Term + 195455 195576  122  0  2   76   42   153 0.492   8.14
 6.04 PlyA + 196087 196092    6                               1.05

 7.00 Prom + 209165 209204   40                              -3.46
 7.01 Sngl + 220804 221256  453  0  0   50   55   244 0.300  11.52
 7.02 PlyA + 222774 222779    6                               1.05

 8.02 PlyA - 222787 222782    6                               1.05
 8.01 Term - 236481 236297  185  1  2   93   49   101 0.662   4.41

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577f:36599747_36845270|GENSCAN_predicted_peptide_1|327_aa
MNIDAKILNKILANRIQQHIKRLIHHDQVGFIPGMQGWFNIHKSINVIQHINRTNDKNHM
IISVDAEKAFDKIQQPFMLKTLNKLDDMIVYLENPIVSAQSLLKLISNFSKVSGYKINVQ
KSQAFLYTYNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPMLIEIKEDT
NKWKNIPCSWIGRINIVKMAILPKVIYRFNAMPIKLPMAFFTELEKTTLKFIWNQKRARI
AKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIMPHVYNYLI
FDKPDKNKKWGKDSTFNKRCWENWLAI

>gi568815577f:36599747_36845270|GENSCAN_predicted_CDS_1|984_bp
atgaacatcgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatc
aaaaggcttatccaccatgatcaagtgggcttcatccctggaatgcaaggctggttcaac
atacacaaatcaataaatgtaatccagcatataaacagaaccaatgacaaaaaccacatg
attatctcagtagatgcagaaaaggcctttgacaaaattcaacagcccttcatgctaaaa
actctcaataaattagatgacatgattgtatatctggaaaaccccatcgtctcagcccaa
agtctccttaagctgataagcaacttcagcaaagtctcaggatataaaattaatgtacaa
aaatcacaagcattcttatacacttataacagacaaacagagagccaaatcatgagtgaa
ctcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggat
gtgaaggacctcttcaaggagaactacaaaccaatgctcattgaaataaaagaggataca
aacaaatggaagaacattccatgctcatggataggaagaatcaatatcgtgaaaatggcc
atactgcccaaggtaatttatagattcaatgccatgcccatcaagctaccaatggctttc
ttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgcatt
gccaagtcaatcctgagccaaaagaacaaagctggaggcatcacgctacctgacttcaaa
ctatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatata
gaccaatggaacagaacagagccctcagaaataatgccgcatgtctacaactatctgatc
tttgacaaacctgacaaaaacaagaaatggggaaaggattccacatttaacaaaaggtgc
tgggaaaactggctagccatatga

>gi568815577f:36599747_36845270|GENSCAN_predicted_peptide_2|53_aa
MTVSFLRLPQPYFLYSLQNNQTTFSSYAAPGMNASEALQLLEADIGLKEPMSP

>gi568815577f:36599747_36845270|GENSCAN_predicted_CDS_2|162_bp
atgactgtaagcttcctgaggcttccacagccatacttcctgtacagcctgcagaacaac
caaacaaccttcagctcctatgcggcacctggcatgaatgcttctgaggctctgcagctg
ctggaggcggacattggcctaaaggagcccatgagtccatga

>gi568815577f:36599747_36845270|GENSCAN_predicted_peptide_3|301_aa
MVALNDDFYIFSTIRLVWFPGAEAQLSFVCVCLFHGIPEDFHLQEYVMSEILLGTGSSAL
SLSGSPGQRGNIQYSEGEGKQQTFRDQRHGQLRLKEPSRQNIKGRRPLIETNGGTIKGRR
PVRCGLDVFKDQKDRRQLECRLPSAPGWDPVFKCNSQASCPLLCVLLDCALAWIKGGPHI
VQQSRWERLAPWDPASWPRSADMGWKHYSNESCETDGLWPRLLNTDTLLINTQHPDILIS
AQILGVVAAGASSAWPGSPIAHSCQCAHAQTCTIPVQPLQLPPGIFSQDLEAVRKGELMR
P

>gi568815577f:36599747_36845270|GENSCAN_predicted_CDS_3|906_bp
atggtggccctgaatgatgatttttatatcttcagcaccattagacttgtatggtttcct
ggagctgaagctcagctttcctttgtctgtgtctgtctatttcatggcatccctgaagac
ttccacctccaggaatatgtcatgtctgagatcttgttgggaactggatccagtgccctg
agcctctctggttcacctggtcagagaggaaatatccagtattctgaaggggagggcaag
cagcagacattcagagatcagcggcatggacagctgaggctgaaagagccctccaggcag
aacatcaagggcagaaggcccttgatagagaccaatggagggaccatcaagggcagaagg
ccagttaggtgtgggcttgacgtcttcaaggaccagaaagatagacgccagctcgaatgc
cgcctcccgtctgctcctggttgggatcctgtcttcaagtgcaacagccaagccagctgc
ccactcctctgtgtcctcttagattgtgctctggcttggataaagggtggaccacacatt
gttcagcagagcagatgggagcgcctggcgccctgggatcccgcatcctggccgcggtct
gccgacatgggttggaagcattattcaaatgagtcctgtgaaactgatggcctgtggccc
cggttgttaaacaccgacacgctgctcattaacactcagcatccggatatcctaatttca
gctcagattttgggtgtggtggcagcaggtgcctcttctgcatggccagggtcccccatc
gctcacagctgtcagtgtgcacatgctcagacctgcaccattcctgtccagcccctgcag
ttaccacctggaatcttcagccaggacttggaggctgtgaggaaaggcgagctcatgcga
ccctag

>gi568815577f:36599747_36845270|GENSCAN_predicted_peptide_4|1200_aa
MQILGQETLPEDPLSLPIPEPEVIPDNQVQAHEPRRSASGSSLPPQAAQERPGAGSCQRS
QERDPGRGGHAPHCSTALQPVAHGRESPHDLDAKLLDLQHREGEDAGPAHPRKARSSPAG
RLANESRRLLSAAPAGGQCSARRRVCHKQTRLGRTWTAEVLRLATHRGLRRCVSRHREPP
GRAGERARARARPQPPATRSPPLGSRSMAPRPPPPLSPSGPEGPCRSRFEHSTKDRGAMK
EKSKNAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGLKM
CQWARGAGTRGAEDSEQEEIVARWFGKRRKKRAFQGPRGEHEGSDAGEGLKRAEAPQIAT
IYWDPFVGKGGLEAQAIGCPRATRREPGPKLPPYALAQVPGDWCSQGSPLSLPPLQGVVL
RLLGHKRRGQRWLQDNCPTPGTTQQQRKGQLPGCLCRFLEIRIPGSLVKSYFTKSQDLHI
LVLAIANSCKCCRHEAWEEGPAGESTGSAAVITVVMRGLGDAWGQPSRAGPLDGVAKELG
SHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQGSLGCKLKPQCHGLFRQCGRQFRAL
SSVEKRKLFLRLAKVWVVSRDQSSVPGRVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHH
HLLQEYEIERSFFLRMKCVLAKRNAGLTCSGYKVIHCSGYLKIRQYMLDMSLYDSCYQIV
GLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYHH
VHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVSV
NYVLTEIEYKELQLSLEQVSTAKSQDSWRTALSTSQETRKLVKPKNTKMKTKLRTNPYPP
QGRKAASCRPLAGPSSIFFAMQQYSSFQMDKLECGQLGNWRASPPASAAAPPELQPHSES
SDLLYTPSYSLPFSYHYGHFPLDSHVFSSKKPMLPAKFGQPQGSPCEVARFFLSTLPASG
ECQWHYANPLVPSSSSPAKNPPEPPANTARHSLVPSYEAPAAAVRRFGEDTAPPSFPSCG
HYREEPALGPAKAARQAARDGARLALARAAPECCAPPTPEAPGAPAQLPFVLLNYHRVLA
RRGPLGGAAPAASGLACAPGGPEAATGALRLRHPSPAATSPPGAPLPHYLGASVIITNGR

>gi568815577f:36599747_36845270|GENSCAN_predicted_CDS_4|3603_bp
atgcaaatcctgggacaggagacactgcctgaggaccctctctcactcccaatcccagaa
cccgaagttatccccgacaaccaagtccaagcacatgaaccaagacgatcagcttcaggc
agctccttacccccacaagcggcccaggagaggcccggagccggcagctgtcagcgcagc
caggagcgggatcctgggcgcggaggtcacgcaccccactgctccacggctctgcagcct
gtggcacacggccgagagtccccacatgatctcgacgccaagctcttggacctgcaacac
cgggagggcgaggacgcgggaccagcgcaccctcggaaggctcgatcctccccggcaggg
cgcctggccaacgagtcgcgccgcctcctctcggccgcgcctgctggcggccagtgctcc
gcccgaaggcgggtctgccataaacaaacgcggctcggccgcacgtggacagcggaggtg
ctgcgcctagccacacatcgcgggctccggcgctgcgtctccaggcacagggagccgcca
ggaagggcaggagagcgcgcccgggccagggcccggccccagccgcctgcgactcgctcc
cctccgctgggctcccgctccatggctccgcggccaccgccgcccctgtcgccctccggt
ccggaggggccttgccgcagccggttcgagcactcgacgaaggaccgaggcgcgatgaag
gagaagtccaagaatgcggccaagaccaggagggagaaggaaaatggcgagttttacgag
cttgccaagctgctcccgctgccgtcggccatcacttcgcagctggacaaagcgtccatc
atccgcctcaccacgagctacctgaagatgcgcgccgtcttccccgaaggattgaaaatg
tgccagtgggccaggggcgctgggacccgcggtgcggaagactcggaacaggaagaaata
gtggcgcgctggtttggaaaaaggcgcaagaagcgggcttttcagggaccccggggagaa
cacgagggctccgacgcgggagaaggattgaagcgtgcagaggcgccccaaattgcgaca
atttactgggatccttttgtggggaaaggaggcttagaggctcaagctataggctgtcct
agagcaactaggcgagaacctggccccaaactccctccttacgccctggcacaggttccc
ggcgactggtgttcccaagggagccccctgagcctaccgcccttgcagggggtcgtgctg
cggcttctgggtcataaacgccgagggcaaaggtggctccaggacaactgcccaacccca
ggaacgacccagcagcagagaaaaggacagctgccagggtgcctttgtcgctttttggaa
atcagaattcctgggtccttagttaagtcttacttcaccaaatcccaggaccttcacatt
ttggttcttgccattgctaacagttgtaaatgctgccgccacgaggcctgggaggaagga
cccgctggtgagagcacagggagtgctgctgtgatcacggtggtgatgcggggtttagga
gacgcgtggggacagccgagccgcgccgggcccctggacggcgtcgccaaggagctggga
tcgcacttgctgcagactttggatggatttgtttttgtggtagcatctgatggcaaaatc
atgtatatatccgagaccgcttctgtccatttaggcttatcccagggttctcttggctgc
aagctcaagcctcagtgccatggcctttttagacagtgtgggagacagttcagagctctg
agctctgttgagaaaagaaaactgtttctgcgtttggcaaaggtgtgggttgtcagcaga
gatcaaagttctgttcctggcagggtggagctcacgggcaacagtatttatgaatacatc
catccttctgaccacgatgagatgaccgctgtcctcacggcccaccagccgctgcaccac
cacctgctccaagagtatgagatagagaggtcgttctttcttcgaatgaaatgtgtcttg
gcgaaaaggaacgcgggcctgacctgcagcggatacaaggtcatccactgcagtggctac
ttgaagatcaggcagtatatgctggacatgtccctgtacgactcctgctaccagattgtg
gggctggtggccgtgggccagtcgctgccacccagtgccatcaccgagatcaagctgtac
agtaacatgttcatgttcagggccagccttgacctgaagctgatattcctggattccagg
gtgaccgaggtgacggggtacgagccgcaggacctgatcgagaagaccctataccatcac
gtgcacggctgcgacgtgttccacctccgctacgcacaccacctcctgttggtgaagggc
caggtcaccaccaagtactaccggctgctgtccaagcggggcggctgggtgtgggtgcag
agctacgccaccgtggtgcacaacagccgctcgtcccggccccactgcatcgtgagtgtc
aattatgtactcacggagattgaatacaaggaacttcagctgtccctggagcaggtgtcc
actgccaagtcccaggactcctggaggaccgccttgtctacctcacaagaaactaggaaa
ttagtgaaacccaaaaataccaagatgaagacaaagctgagaacaaacccttacccccca
cagggccggaaggcagcttcctgccggcccctcgctggcccttcatccatcttctttgcc
atgcagcaatacagctcgttccaaatggacaaactggaatgcggccagctcggaaactgg
agagccagtccccctgcaagcgctgctgctcctccagaactgcagccccactcagaaagc
agtgaccttctgtacacgccatcctacagcctgcccttctcctaccattacggacacttc
cctctggactctcacgtcttcagcagcaaaaagccaatgttgccggccaagttcgggcag
ccccaaggatccccttgtgaggtggcacgctttttcctgagcacactgccagccagcggt
gaatgccagtggcattatgccaaccccctagtgcctagcagctcgtctccagctaaaaat
cctccagagccaccggcgaacactgctaggcacagcctggtgccaagctacgaagcgccc
gccgccgccgtgcgcaggttcggcgaggacaccgcgcccccgagcttcccgagctgcggc
cactaccgcgaggagcccgcgctgggcccggccaaagccgcccgccaggccgcccgggac
ggggcgcggctggcgctggcccgcgcggcacccgagtgctgcgcgcccccgacccccgag
gccccgggcgcgccggcgcagctgcccttcgtgctgctcaactaccaccgcgtgctggcc
cggcgcggaccgctggggggcgccgcacccgccgcctccggcctggcctgcgctcccggc
ggccccgaggcggcgaccggcgcgctgcggctccggcacccgagccccgccgccacctcc
ccgcccggcgcgcccctgccgcactacctgggcgcctcggtcatcatcaccaacgggagg
tga

>gi568815577f:36599747_36845270|GENSCAN_predicted_peptide_5|182_aa
MVVVVVDTDIMNFIYKDINLRVKWPNDIYYSDLMKIGGVLVNSTLMGETFYILIGCGFNV
TNSNPTICINDLITEYNKQHKAELKPLRADYLIARVVTVLEKLIKEFQDKGPNSVLPLYY
RYWVHSGQQVHLGSAEGPKVSIVGLDDSGFLQVHQEGGEVVTVHPDGNSFDMLRNLILPK
RR

>gi568815577f:36599747_36845270|GENSCAN_predicted_CDS_5|549_bp
atggtggtggtggtggtggatactgacataatgaacttcatttacaaggatatcaactta
cgagtgaagtggcccaacgatatttattacagtgacctcatgaagatcggcggagttctg
gttaactcaacactcatgggagaaacattttatatacttattggctgtggatttaatgtg
actaacagtaaccctaccatctgcatcaacgacctcatcacagaatacaataaacaacac
aaggcagaactgaagcccttaagagccgattatctcatcgccagagtcgtgactgtgctg
gagaaactgatcaaagagtttcaggacaaagggcccaacagcgtccttcccctttattac
cgatactgggtccacagtggtcagcaagtccatctgggcagcgcagagggaccaaaggtg
tccatcgttggcctggacgattctggcttcctccaggttcaccaggagggcggcgaggtt
gtgactgtgcacccggacggcaactccttcgacatgctgagaaacctcatcctccccaaa
cggcggtaa

>gi568815577f:36599747_36845270|GENSCAN_predicted_peptide_6|110_aa
MTRPLNIPQNVFHGEGVEENREHYRTAKENTLRLSSTISIKISETGQDSELDPVSVCGPE
SCRYRLQAQHANTKHGDQAMSSHWNRKKEKKGNALRLLRGHIDGAQLASI

>gi568815577f:36599747_36845270|GENSCAN_predicted_CDS_6|333_bp
atgaccaggcctctgaacattccacaaaacgtgttccatggagagggtgtagaggagaat
agggagcattaccgaacagcaaaggaaaacactttaagactctcctcaaccatttccatt
aaaatttcagaaacaggccaggattctgagttggatcctgtgtctgtctgtggccctgag
agctgcaggtatcgactacaggctcagcatgcaaacacgaagcatggtgaccaagccatg
tcatcacactggaaccgcaaaaaagagaagaaaggaaatgcgcttcgtcttctgcgagga
cacattgacggtgctcagctagccagcatctag

>gi568815577f:36599747_36845270|GENSCAN_predicted_peptide_7|150_aa
MLRAALTCQPPAASVPTGLWAPTSTGFWDAKGALRAVWHRPVRALQHEQPGCCGHRGCQV
DGCRRQTGSWAESGTSLVKLHLQVKDNLKHFLGLDSFCLFDDPKSTEKPEVSSVGGDPVE
GKYKPESRMLSADWEATSWSGLVPALAPGT

>gi568815577f:36599747_36845270|GENSCAN_predicted_CDS_7|453_bp
atgctcagggcggcgctgacatgccagccccctgctgcctcagtccccactggactttgg
gcaccaacaagcacaggcttctgggatgccaagggggcgctgagggcagtttggcacagg
cctgtacgcgcccttcagcatgaacagcctgggtgctgtgggcaccgtggatgtcaggtt
gatggctgcagaaggcagacaggctcctgggcagaaagtgggacgtccctggtgaagctc
catcttcaagtcaaggacaacctgaagcatttcttggggctggatagcttttgtcttttc
gatgaccccaaaagcacggaaaaaccagaagtcagctccgtgggtggtgaccccgtggag
gggaaatataaaccagaaagtaggatgctgagtgcagactgggaggcgacttcatggtct
ggactagtgccagccctagcgcctgggacgtga

>gi568815577f:36599747_36845270|GENSCAN_predicted_peptide_8|61_aa
XGEVTVEGHRPLPVWSCVSGAVFQNSFVTVTRRFSRGTFVGLCYEYKQTVIRMKVRTWHW
G

>gi568815577f:36599747_36845270|GENSCAN_predicted_CDS_8|186_bp
ntgggagaggtgactgtggaaggacatcggcccttaccagtatggagctgtgtaagtggg
gccgtgttccagaatagttttgtcacagtgactaggagattttctcgggggacttttgtg
ggactctgctacgaatacaagcaaaccgtaataagaatgaaggttcggacgtggcactgg
ggatag