GENSCAN 1.0	Date run:  5-Nov-116	Time: 07:18:03

Sequence gi568815595r:145970720_146260989 : 290270 bp : 36.25% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    930    978   49  2  1   37   84    77 0.789   3.36
 1.02 Term +   5008   5255  248  2  2   75   48   136 0.528   3.27
 1.03 PlyA +   5370   5375    6                               1.05

 2.03 PlyA -   8329   8324    6                               1.05
 2.02 Term -  26030  25679  352  1  1   88   43   192 0.615   7.67
 2.01 Init -  34018  33963   56  1  2   67  102    48 0.804   4.91
 2.00 Prom -  55145  55106   40                              -2.45

 3.00 Prom +  58301  58340   40                              -4.05
 3.01 Init +  63389  63538  150  1  0   75  -26   127 0.479   0.09
 3.02 Term +  65056  65208  153  0  0   -1   47   245 0.559   8.44
 3.03 PlyA +  65250  65255    6                               1.05

 4.18 PlyA -  65455  65450    6                               1.05
 4.17 Term -  69803  69686  118  1  1   -7   50   149 0.033  -1.37
 4.16 Intr -  95966  95716  251  2  2   16   82   129 0.095   0.41
 4.15 Intr - 100448 100323  126  2  0   83   91   143 0.995  14.06
 4.14 Intr - 100704 100558  147  0  0   85   63   188 0.999  15.51
 4.13 Intr - 101946 101842  105  0  0   26  103   105 0.954   5.29
 4.12 Intr - 108538 108397  142  0  1   65   95   130 0.990  10.83
 4.11 Intr - 111144 111019  126  2  0  114   84   134 0.999  14.47
 4.10 Intr - 114554 114450  105  1  0   76   80    79 0.945   4.31
 4.09 Intr - 116189 116068  122  2  2   66   48    58 0.188  -2.03
 4.08 Intr - 121182 121081  102  0  0   68   95    43 0.173   2.45
 4.07 Intr - 132133 132036   98  2  2   90  115    76 0.923   9.31
 4.06 Intr - 133623 133560   64  0  1   98   57    39 0.786  -0.83
 4.05 Intr - 135925 135813  113  2  2  112   61   129 0.999  11.78
 4.04 Intr - 139729 139566  164  0  2   46  105   151 0.995  11.30
 4.03 Intr - 150529 150393  137  1  2   83   58   145 0.964   9.45
 4.02 Intr - 153510 153419   92  1  2  126   86    43 0.873   6.69
 4.01 Init - 170196 170100   97  0  1   68  115    11 0.037   2.32
 4.00 Prom - 183832 183793   40                              -2.55

 5.11 PlyA - 184038 184033    6                               1.05
 5.10 Term - 189911 189775  137  0  2   93   41    78 0.295   0.80
 5.09 Intr - 190358 190162  197  1  2   20   99   164 0.036   8.84
 5.08 Intr - 197028 196973   56  0  2   28  103    74 0.008  -0.24
 5.07 Intr - 224563 224405  159  1  0   81   61   175 0.351  13.36
 5.06 Intr - 226074 225913  162  0  0  104   52   126 0.997   9.85
 5.05 Intr - 229320 229094  227  1  2   74   55   127 0.234   4.78
 5.04 Intr - 232988 232802  187  2  1   34   57   127 0.286   2.54
 5.03 Intr - 236042 235807  236  0  2   88   78   181 0.878  13.58
 5.02 Intr - 250206 250096  111  1  0   97   94    72 0.967   8.13
 5.01 Init - 254804 254624  181  2  1   72   44   215 0.618  13.01
 5.00 Prom - 261267 261228   40                              -4.05

 6.06 PlyA - 261384 261379    6                               1.05
 6.05 Term - 271579 271346  234  1  0   22   43   154 0.222  -0.36
 6.04 Intr - 279918 279838   81  0  0   77   98    30 0.385   1.82
 6.03 Intr - 280296 280241   56  1  2   93  101    71 0.971   6.68
 6.02 Intr - 286290 285660  631  0  1  -19   67   322 0.426  10.21
 6.01 Init - 286992 286885  108  0  0   50   20   128 0.393   2.47

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 182283 182476  194  1  2    4   47   234 0.822   7.50
S.002 Init - 190270 190162  109  1  1   71   99   147 0.814  13.18
S.003 Term + 212436 212952  517  0  1   78   54   212 0.803   9.60


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:145970720_146260989|GENSCAN_predicted_peptide_1|98_aa
MFGDVGDMTFTSLEEQCCAGSVGLANILKNPYLVKSSKIIDLDTNNIPHSISLADSGQFQ
LSIEAPKAGESSVAPKNGKKGYNLHLPKLKETPELNGN

>gi568815595r:145970720_146260989|GENSCAN_predicted_CDS_1|297_bp
atgtttggagatgttggagatatgacttttaccagtttagaagaacagtgctgtgctggc
tctgtagggctagccaatatccttaaaaatccatatttggtgaaatctagtaaaataatt
gatctagatacgaataatattccccacagtatttcactggctgattccggccaattccag
ttatcaatagaagctccaaaggctggagagagttctgtggcccccaaaaatgggaagaag
gggtataatcttcaccttcccaagctcaaagaaacccctgaactaaatgggaactga

>gi568815595r:145970720_146260989|GENSCAN_predicted_peptide_2|135_aa
MEKLKEEPRALSVAKSIQRHFELFVRHDMAIRNFKNCPADSIVQQSLRAITLDQQFLDLA
CIGIICRAVTTQTTDSIESEPSRDSDSIDLEWGLRIYISNKFPDDANTAGPLKITDLRAV
LLTYSCTDQLIWSKG

>gi568815595r:145970720_146260989|GENSCAN_predicted_CDS_2|408_bp
atggaaaagctaaaagaggaacctagagctttgtctgtggctaagtccattcaaaggcat
tttgagttatttgtaagacatgatatggctatcagaaattttaaaaactgtcctgctgat
tctattgtgcaacaaagtttgagagccattactctagaccagcagttccttgacttagcc
tgcatcggcatcatttgtagggctgtgacaacacagactactgattctattgaatcagaa
ccttccagggattctgattcaatagacctggagtggggtttgagaatttacatttctaac
aagttcccagatgatgccaatactgctggtcctttaaaaattactgatcttagagcagtg
cttctcacttacagctgtactgatcagttgatctggagtaagggctaa

>gi568815595r:145970720_146260989|GENSCAN_predicted_peptide_3|100_aa
MNAEGDSEGTVAIKRVSVPCKRDSTTEFQLLLPFEYPGTESADLISHEGLPQAGPSEDIP
EEVIVIIREDRPMHVIDPEDLPVGQDVEVEDSDIHDYDPV

>gi568815595r:145970720_146260989|GENSCAN_predicted_CDS_3|303_bp
atgaatgctgaaggggactcagagggtactgtggcaatcaagagagtttctgtcccatgt
aaaagggacagcaccactgagtttcagttgcttttgccatttgagtacccaggcactgaa
tcagcagatctaatttctcatgaggggctgcctcaggcaggtccttcagaagatattcca
gaagaagtcattgttatcatacgagaggacagacccatgcatgttatcgaccctgaagac
cttccagtgggacaagatgtggaagtggaagacagtgatattcatgattatgaccctgtg
tag

>gi568815595r:145970720_146260989|GENSCAN_predicted_peptide_4|702_aa
MWKTFCLGPLIIGINSSVDLDVLGKYPIIGKYDKLLVITVATKESDGFHRFMQSAKYFNY
TVKVLGQGEEWRGGDGINSIGGGQKVRLMKEVMEHYADQDDLVVMFTECFDVIFAGGPEE
VLKKFQKANHKVVFAADGILWPDKRLADKYPVVHIGKRYLNSGGFIGYAPYVNRIVQQWN
LQDNDDDQLFYTKVYIDPLKREAINITLDHKCKIFQTLNGAVDEVVLKFENGKARAKNTF
YETLPVAINGNGPTKILLNYFGNYVPNSWTQDNGCTLCEFDTVDLSAVDEVYHEKDIKVF
FDKAKHEIKTIKIVGPEENLSQAEARNMGMDFCRQDEKCDYYFSVDADVVLTNPRTLKIL
IEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYARSEDYVDIVQGNRVGVWNVPYMANVYL
IKGKTLRSEMNERNYFVRDKLDPDMALCRNAREMPCPDVFWFPIFSEKACDELVEEMEHY
GKWSGGKHHDSRISGGYENVPTDDIHMKQVDLENVWLHFIREFIAPVTLKVFAGYYTKGF
ALLNFVVKYSPERQRSLRPHHDASTFTINIALNNVGEDFQTGNNKCLRGCGEKGPLHIGT
TAVENVINYNHYGVQFGGSSKKLKMELPYDTAIPVLDIYPEEKEISVPKQYLHSCVCCST
VHNSKGEGFANILAQVEEHFEGHQEVLTNKKLEELVESSTEE

>gi568815595r:145970720_146260989|GENSCAN_predicted_CDS_4|2109_bp
atgtggaaaacattctgtctggggccacttattataggaataaacagctctgtagattta
gatgttctggggaagtaccctatcattggaaaatatgataaattattagtcataactgta
gcaacaaaagaaagtgatggattccatcgatttatgcagtcagccaaatatttcaattat
actgtgaaggtccttggtcaaggagaagaatggagaggtggtgatggaattaatagtatt
ggagggggccagaaagtgagattaatgaaagaagtcatggaacactatgctgatcaagat
gatctggttgtcatgtttactgaatgctttgatgtcatatttgctggtggtccagaagaa
gttctaaaaaaattccaaaaggcaaaccacaaagtggtctttgcagcagatggaattttg
tggccagataaaagactagcagacaagtatcctgttgtgcacattgggaaacgctatctg
aattcaggaggatttattggctatgctccatatgtcaaccgtatagttcaacaatggaat
ctccaggataatgatgatgatcagctcttttacactaaagtttacattgatccactgaaa
agggaagctattaacatcacattggatcacaaatgcaaaattttccagaccttaaatgga
gctgtagatgaagttgttttaaaatttgaaaatggcaaagccagagctaagaatacattt
tatgaaacattaccagtggcaattaatggaaatggacccaccaagattctcctgaattat
tttggaaactatgtacccaattcatggacacaggataatggctgcactctttgtgaattc
gatacagtcgacttgtctgcagtagatgaagtttatcatgaaaaggacatcaaggtattt
tttgataaagctaagcatgaaatcaaaactataaaaatagtaggaccagaagaaaatcta
agtcaagcggaagccagaaacatgggaatggacttttgccgtcaggatgaaaagtgtgat
tattactttagtgtggatgcagatgttgttttgacaaatccaaggactttaaaaattttg
attgaacaaaacagaaagatcattgctcctcttgtaactcgtcatggaaagctgtggtcc
aatttctggggagcattgagtcctgatggatactatgcacgatctgaagattatgtggat
attgttcaagggaatagagtaggagtatggaatgtcccatatatggctaatgtgtactta
attaaaggaaagacactccgatcagagatgaatgaaaggaactattttgttcgtgataaa
ctggatcctgatatggctctttgccgaaatgctagagaaatgccctgtccagatgtcttt
tggttccccatattttctgaaaaagcctgtgatgaattggtagaagaaatggaacattac
ggcaaatggtctgggggaaaacatcatgatagccgtatatctggtggttatgaaaatgtc
ccaactgatgatatccacatgaagcaagttgatctggagaatgtatggcttcattttatc
cgggagttcattgcaccagttacactgaaggtctttgcaggctattatacgaagggattt
gcactactgaattttgtagtaaaatactcccctgaacgacagcgttctcttcgtcctcat
catgatgcttctacatttaccataaacattgcacttaataacgtgggagaagactttcag
acaggcaataacaaatgcttgagaggatgtggagaaaagggacccctccacattgggacc
actgctgttgagaatgtaattaattacaaccactatggagtacagtttggaggttcctca
aaaaaactaaaaatggagctgccatatgatacagcaattccagtgcttgatatataccca
gaagaaaaagaaatcagtgtgccgaagcaatatctgcactcctgtgtttgttgcagcact
gttcacaatagcaaaggagaaggatttgccaacatacttgctcaggtggaagaacatttt
gaaggccatcaagaagtattaacaaataagaaattggaagaacttgttgaatcatctaca
gaggaatag

>gi568815595r:145970720_146260989|GENSCAN_predicted_peptide_5|550_aa
MGSCAARASPTSTTPCSTAPSPIDHPRAEECKRMARDWQAAPPAALLRDPLGEASCAPES
GVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYS
PQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQAEKG
EEATEKKSLKLAEVGSQGLRGEKRHFCNIEVQGEAASPDVEAAVSFSEDPNYNKIIDEVM
TCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFR
CTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYG
CGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDLDVKMKAMIFGACFL
ILCQNRDDQNQQTKSHGKDRADPGLCVLARSAALRGRGRLSPRGPRGPNMGGCTVKPQLL
LLALVLHPWNPCLGADSEKPSSIPTEQVGVSFWTCRSWAPTPFLQLSFPLLSESWHGFIL
DGRGSTPSVT

>gi568815595r:145970720_146260989|GENSCAN_predicted_CDS_5|1653_bp
atgggctcctgtgcggcccgagcctccccgacgagcaccaccccctgctccaccgcaccc
agtcccatcgaccacccaagggctgaggagtgcaagcgcatggcacgggactggcaggca
gctccacctgcagccctgctgcgggatccactaggtgaagccagctgtgctcctgagtct
ggtgtggtacccacagcccctgaacagcctgcaggtgaaatggaaaatcaaacaaaacca
ccagatccaaggcctgatgctcctcctgaatacaattctcattttttaccaggaccccct
ggaacagctgtccctccacctactggctacccaggaggcttgcctatgggatactacagt
ccacagcaacccagtaccttccctttgtaccagccagttggtggtatccatcctgtccgg
tatcagcctggcaaatatcctatgccaaatcagtctgttccaataacatggatgccaggg
ccaactcctatggcaaactgccctcctggtctggaatacttagttcaggctgagaaaggt
gaggaagctacagaaaaaaaaagtttgaagctggcagaggttggctcacaaggcttaagg
ggggaaaaaaggcacttttgtaacatagaagtgcaaggtgaagcagcaagtcctgatgta
gaagctgcagtaagtttttcagaagatcctaactataacaagatcattgatgaagtgatg
acatgttttgaaactaataatagatatgatattaaaaacaactcagaccagatggtttac
attgtaaccgaagacacagatgactttaccaggaatgcctatcggacactaaggcccttc
gtcctccgggtcactgattgtatgggccgagaaatcatgacaatgcagagacccttcaga
tgcacctgctgttgcttctgttgcccctctgccagacaagagctggaggtgcagtgtcct
cctggtgtcaccattggctttgttgcggaacattggaacctgtgcagggcggtgtacagc
atccaaaatgagaagaaagaaaatgtgatgagagttcgtgggccatgctcaacctatggc
tgtggttcagattctgtttttgaggtcaaatcccttgatggcatatccaacatcggcagt
attatccggaagtggaatggtttgttatcagcaatggcagatgctgaccattttgacatt
cacttcccactagacctggatgtgaagatgaaagccatgatttttggagcttgcttcctc
attctctgccagaatagggatgatcagaaccagcagactaagagccatgggaaagacagg
gcggacccgggtctctgcgttctcgcgagaagcgcggcgctgcggggccgtgggcgcctg
agcccgcgcggccctcgagggccgaatatggggggatgcacggtgaagcctcagctgctg
ctcctggcgctcgtcctccacccctggaatccctgtctgggtgcggactcggagaagccc
tcgagcatccccacagaacaagttggagtttccttttggacttgcaggtcatgggcacca
acacctttcctgcagctctcctttcccctcctttccgagagttggcatggatttatcctt
gatggacgaggcagtactccttctgtgacctaa

>gi568815595r:145970720_146260989|GENSCAN_predicted_peptide_6|369_aa
MDSEVQTEEVSDGNKEFIGNRSEGSPRYALAKNLAAYAGPWYASLKKTWQLSTRFQRMYK
KAWLPGQEPATGAESSQRISTRTAQRGNVGLEPQHRGPTRALPNGAVGNVGLEPQHRVPT
RALPNGAVGRGLPAFRPQNGRATDSLQPHPGTKTGNQLQPMRVAMGATSWNATGVELPKV
LGAHYLHQCALDVGHGVKGDFGALRFNDCSVGMQTCVGPIAPFVWPISPFWNGNVYPMPV
PPQYLVVQLDPASGVPGAQHSAGQAVSLDWVSHGSLAFLRRGSHGLRPGHSQKNFRQIQQ
SLSERKTIHESGSPQNQKSFRELHRATWAGSIHKQRKEVTYINQLIGSSLVFALFGHGVM
RHLPSTDMV

>gi568815595r:145970720_146260989|GENSCAN_predicted_CDS_6|1110_bp
atggacagtgaagtccagactgaggaggtctcagatggaaataaggaatttattgggaac
aggagtgaaggtagcccccgttacgccctcgcaaagaacttagctgcatatgcaggccca
tggtatgcaagtttgaagaagacttggcagctttccactcgatttcagaggatgtataag
aaagcttggctgcccgggcaggagcctgctacaggggcagagtcctcacagagaatctct
actaggacagcacagaggggaaatgtggggttggagccccaacacagaggccccacgagg
gcactacctaatggagctgtgggaaatgtggggttggagccccaacacagagtccccacg
agggcactacctaatggagctgtggggagggggctgccagccttcagaccccagaatggt
agagccactgacagcttgcaacctcatcctggaaccaaaacaggcaaccaactccaacct
atgagagtagccatgggggctacatcctggaatgccacaggggtggagctgcccaaggtg
ttgggagcccactacttgcatcagtgtgccctggatgtgggacatggagtcaaaggagat
tttggagctttgagattcaatgactgctctgttgggatgcagacttgtgtggggcctatt
gcccctttcgtttggccaatttctcccttttggaatgggaatgtttacccaatgcctgta
ccaccacagtatcttgtagtacaactagacccggcgtctggcgtccccggtgcccagcat
tctgcggggcaggcggtctcgcttgattgggtttctcatgggtctctggcgtttctacgg
cgcggctctcacggactcaggccaggccactcgcagaaaaactttaggcaaattcagcag
agtttatctgagcgaaaaacgattcatgaatcaggcagccctcagaaccagaagagtttc
agagagctccaccgagcaacatgggcaggcagtattcataaacagaggaaagaagtgacg
tacataaatcagttgattggatccagcctggtatttgctttatttggtcatggtgtgatg
aggcatttgccttcaacggacatggtctga