GENSCAN 1.0	Date run:  5-Nov-116	Time: 07:14:05

Sequence gi568815597f:198539269_198856178 : 316910 bp : 35.73% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   1417   1301  117  2  0   43   89   127 0.217   7.82
 1.01 Init -   7657   7561   97  1  1   57   72    68 0.157   2.62
 1.00 Prom -  27581  27542   40                              -0.15

 2.00 Prom +  45798  45837   40                              -4.55
 2.01 Init +  59746  59893  148  0  1   49   81   103 0.098   6.00
 2.02 Intr +  67450  67521   72  2  0   67   93    73 0.011   4.16
 2.03 Intr +  92173  92456  284  2  2   42   52   160 0.146   4.01
 2.04 Term +  97215  97457  243  2  0   52   36   147 0.437   0.82
 2.05 PlyA +  98329  98334    6                               1.05

 3.00 Prom +  99550  99589   40                              -6.95
 3.01 Init + 100007 100073   67  1  1   62  111    50 0.479   6.01
 3.02 Intr + 110696 110823  128  0  2    6   74   155 0.316   5.38
 3.03 Intr + 138267 138313   47  2  2   77   98     9 0.007  -2.91
 3.04 Intr + 139753 139922  170  1  2   23   57   144 0.051   3.47
 3.05 Term + 140644 140852  209  2  2   51   48   179 0.281   6.72
 3.06 PlyA + 142322 142327    6                               1.05

 4.00 Prom + 144179 144218   40                              -5.45
 4.01 Init + 154320 154329   10  2  1   42  111     0 0.380  -1.64
 4.02 Intr + 154750 154872  123  2  0   22   83   113 0.473   3.84
 4.03 Intr + 157444 157641  198  2  0   68   52   124 0.491   5.20
 4.04 Intr + 160296 160436  141  1  0  108   41   263 0.652  23.00
 4.05 Intr + 163119 163262  144  1  0   79   41    89 0.553   2.63
 4.06 Intr + 164030 164104   75  0  0  108   27    63 0.558   0.77
 4.07 Intr + 165204 165230   27  1  0  103  103     9 0.669   1.07
 4.08 Intr + 167466 167684  219  1  0   96   99    68 0.980   6.05
 4.09 Intr + 168865 168993  129  2  0   80   83    27 0.688   1.15
 4.10 Intr + 170419 170556  138  2  0   78   64    88 0.806   4.91
 4.11 Intr + 177414 177572  159  1  0   87   99    63 0.937   6.34
 4.12 Intr + 178826 179034  209  0  2   75   93   123 0.970   9.37
 4.13 Intr + 188496 188541   46  2  1   91  110    -7 0.936  -1.14
 4.14 Intr + 189072 189180  109  1  1  108   99    92 0.997  10.72
 4.15 Intr + 189869 189903   35  2  2   44   98    65 0.974   0.05
 4.16 Intr + 192349 192458  110  2  2   70   89   115 0.996   8.88
 4.17 Intr + 193032 193122   91  2  1   66   70   113 0.996   5.95
 4.18 Intr + 195060 195157   98  1  2   91   90   176 0.953  16.91
 4.19 Intr + 195859 195984  126  0  0   26   82   130 0.983   6.16
 4.20 Intr + 202601 202758  158  1  2   16   91   110 0.962   1.99
 4.21 Intr + 202964 203099  136  2  1   56   87   211 0.967  17.45
 4.22 Intr + 204786 204935  150  2  0   57   95   101 0.895   7.14
 4.23 Intr + 208841 208931   91  1  1  109   50    49 0.799   1.85
 4.24 Intr + 210148 210281  134  2  2   21   78   129 0.430   4.64
 4.25 Intr + 211224 211358  135  2  0   32   72   141 0.987   6.74
 4.26 Intr + 212981 213103  123  1  0   60   86   136 0.994  10.46
 4.27 Intr + 213326 213504  179  1  2   63   96   127 0.999   8.80
 4.28 Intr + 215001 215136  136  0  1  106   88    80 0.988   9.45
 4.29 Term + 216638 216913  276  1  0   82   49   324 0.984  22.38
 4.30 PlyA + 217354 217359    6                               1.05

 5.08 PlyA - 217669 217664    6                               1.05
 5.07 Term - 236666 236548  119  0  2   83   43   125 0.216   5.22
 5.06 Intr - 248013 247985   29  2  2   82   81    38 0.002  -0.66
 5.05 Intr - 258549 258263  287  0  2   40   30   201 0.005   4.72
 5.04 Intr - 274322 274077  246  2  0  116   68    55 0.005   3.03
 5.03 Intr - 287841 287758   84  0  0   60   95    62 0.037   3.20
 5.02 Intr - 288451 288287  165  1  0   22   18   190 0.356   4.64
 5.01 Init - 289653 289393  261  0  0   52   63   146 0.640   5.61
 5.00 Prom - 294808 294769   40                              -4.45

 6.03 PlyA - 294945 294940    6                               1.05
 6.02 Term - 300226 300083  144  1  0   82   46    98 0.260   1.93
 6.01 Init - 302435 302319  117  2  0   53    9   140 0.393   2.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:198539269_198856178|GENSCAN_predicted_peptide_1|72_aa
MNQCVGVQELRLGKFKMPFTSPGGYESDIQGRDFTEATCLEQTTMTSQSQGIHQLLQAEK
RAKDKLEEAKKX

>gi568815597f:198539269_198856178|GENSCAN_predicted_CDS_1|216_bp
atgaaccaatgtgttggtgttcaggaattgagactgggaaagttcaagatgcctttcaca
tctccaggtggatatgaatctgacattcagggcagagatttcacagaagccacttgcttg
gagcagactaccatgacaagccagtctcaggggatccaccagcttcttcaggcagaaaaa
cgggccaaggacaagctagaggaagccaagaagann

>gi568815597f:198539269_198856178|GENSCAN_predicted_peptide_2|248_aa
MVVVKVHGWVIKPWLETQLPISGAVTTAGLMIQGQEQRLREHSRDGRTHAMEEGEKNCHD
YSVLIESGFKPIKDMQMAEPRQESHCQKPVQKEMQRQRETERQRFQQPAAIKGIDKCYTW
LVTLNVRPEVKHIHLSLDLMEQEKYEIHRRPLQSGRLPSCVKSYKTFSTQLFFAKYPFIS
NQPTLPLGISESGSHQYVINTPPVFFESFLLMQAEGLDARPVCDTVEISPDALWKDKLLP
GVLPGCLA

>gi568815597f:198539269_198856178|GENSCAN_predicted_CDS_2|747_bp
atggtggtggtcaaagttcatggttgggttatcaagccatggttagaaacacagctgccg
atatctggggctgtaacaactgcaggtctaatgatccaaggccaggaacaaagattaagg
gagcactctagggatgggagaacccatgctatggaagaaggagagaaaaactgccatgat
tactccgtgttaattgaaagtggttttaaaccaatcaaagatatgcaaatggcagaaccc
agacaggaaagtcattgccaaaagccagtgcagaaagagatgcagagacagagagagaca
gagagacagaggtttcagcaacctgcagccatcaaaggaatcgacaaatgttatacatgg
cttgtaacactgaatgtgaggcctgaagtaaaacacatacatctcagcttagacctcatg
gaacaagaaaaatatgaaatccacagaaggccactccagagtggaagactcccttcatgt
gtgaaaagttacaagactttctcaactcagttgttctttgcaaaatacccatttatcagc
aaccagcccaccctccctctgggaatcagtgagagtggatcacatcagtatgtcataaat
actcctcctgttttctttgagagttttctgctgatgcaagcggaaggcttggatgccagg
cctgtatgtgatacagtagaaatttccccagatgccctgtggaaagacaagctgctaccc
ggagtccttcctggatgtctggcttag

>gi568815597f:198539269_198856178|GENSCAN_predicted_peptide_3|206_aa
MYLWLKLLAFGFAFLDTEVFVTDRVIGEDPYEEESLSYLLADKNMGIHVRETGKSKGYLA
KPNKLTLLILGESSMITLRIGSCMCKGEPEEEKSIIHATLNWRTRLGASGTVQVPELPPT
SQTAAPAVWAHSRPTQPGGRQHFAQLVHRRPGVGDMQRVLRLPVHFLQAQGPGPLAEVPG
MAVQERSAQLGVPLGKAQAQRRLGSL

>gi568815597f:198539269_198856178|GENSCAN_predicted_CDS_3|621_bp
atgtatttgtggcttaaactcttggcatttggctttgcctttctggacacagaagtattt
gtgacagacagagtgatcggggaagatccttatgaagaagaatcattgagctacctgttg
gctgacaagaatatggggatccatgtgagggagactggcaagagtaaaggttatctggca
aaaccaaacaaattgacattacttattttgggggagtcttccatgattaccctaagaata
gggtcttgcatgtgcaaaggggagccggaagaggagaaatctattatacatgcaacactg
aactggagaacacggcttggggcctctgggacagttcaggtccctgagctgccccctact
tcccagacagctgctcctgcagtttgggcacatagtcgtcccactcagcctggtgggcgt
cagcactttgcccagctcgtccaccgtcgccctggcgtaggcgacatgcagcgagtgctg
cggctgcccgtccacttcctgcaggctcaagggcctggaccgcttgctgaggtccctggc
atggctgtgcaagaacgcagcgcgcagctgggagtgccactaggcaaggcgcaggcgcag
cggcgactcggcagcctctga

>gi568815597f:198539269_198856178|GENSCAN_predicted_peptide_4|1234_aa
MKPGHLQAEEQGSQSKSPNLKSREADSSAFSWWPKAREPLTNHWRLTTAKMPSVPLSSDP
LPTHTTAFSPASTFERENDFSETTTSLSPDNTSTQVSPDSLDNASAFNTTGVSSVQTPHL
PTHADSQTPSAGTDTQTFSGSAANAKLNPTPGSNAISDVPGERSTASTFPTDPVSPLTTT
LSLAHHSSAALPARTSNTTITANTSDAYLNASETTTLSPSGSAVISTTTIATTPSKPTCD
EKYANITVDYLYNKETKLFTAKLNVNENVECGNNTCTNNEVHNLTECKNASVSISHNSCT
APDKTLILDVPPGVEKFQLHDCTQVEKADTTICLKWKNIETFTCDTQNITYRFQCGNMIF
DNKEIKLENLEPEHEYKCDSEILYNNHKFTNASKIIKTDFGKKDCLNLDKNLIKYDLQNL
KPYTKYVLSLHAYIIAKVQRNGSAAMCHFTTKSAPPSQVWNMTVSMTSDNSMHVKCRPPR
DRNGPHERYHLEVEAGNTLVRNESHKNCDFRVKDLQYSTDYTFKERAGFHIKLSEYLSQD
NSKALIAFLAFLIIVTSIALLVVLYKIYDLHKKRSCNLDEQQELVERDDEKQLMNVEPIH
ADILLETYKRKIADEGRLFLAEFQSIPRVFSKFPIKEARKPFNQNKNRYVDILPCPRDET
VDDFWRMIWEQKATVIVMVTRCEEGNRNKCAEYWPSMEEGTRAFGDVVVKINQHKRCPDY
IIQKLNIVNKKEKATGREVTHIQFTSWPDHGVPEDPHLLLKLRRRVNAFSNFFSGPIVVH
CSAGVGRTGTYIGIDAMLEGLEAENKVDVYGYVVKLRRQRCLMVQVEAQYILIHQALVEY
NQFGETEVNLSELHPYLHNMKKRDPPSEPSPLEAEFQRLPSYRSWRTQHIGNQEENKSKN
RNSNVIPYDYNRVPLKHELEMSKESEHDSDESSDDDSDSEEPSKYINASFIMSYWKPEVM
IAAQGPLKETIGDFWQMIFQRKVKVIVMLTELKHGDQEICAQYWGEGKQTYGDIEVDLKD
TDKSSTYTLRVFELRHSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKN
SSEGNKHHKSTPLLIHCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRKARPGMV
STFEQYQFLYDVIASTYPAQNGQVKKNNHQEDKIEFDNEVDKVKQDANCVNPLGAPEKLP
EAKEQAEGSEPTSGTEGPEHSVNGPASPALNQGS

>gi568815597f:198539269_198856178|GENSCAN_predicted_CDS_4|3705_bp
atgaaaccaggccatctgcaagctgaggagcaaggaagccaatccaagtcaccaaacctc
aaaagtagggaagctgacagttcagccttcagttggtggccaaaggcccgagagcccctc
acaaaccactggagattgactacagcaaagatgcccagtgttccactttcaagtgacccc
ttacctactcacaccactgcattctcacccgcaagcacctttgaaagagaaaatgacttc
tcagagaccacaacttctcttagtccagacaatacttccacccaagtatccccggactct
ttggataatgctagtgcttttaataccacaggtgtttcatcagtacagacgcctcacctt
cccacgcacgcagactcgcagacgccctctgctggaactgacacgcagacattcagcggc
tccgccgccaatgcaaaactcaaccctaccccaggcagcaatgctatctcagatgtccca
ggagagaggagtacagccagcacctttcctacagacccagtttccccattgacaaccacc
ctcagccttgcacaccacagctctgctgccttacctgcacgcacctccaacaccaccatc
acagcgaacacctcagatgcctaccttaatgcctctgaaacaaccactctgagcccttct
ggaagcgctgtcatttcaaccacaacaatagctactactccatctaagccaacatgtgat
gaaaaatatgcaaacatcactgtggattacttatataacaaggaaactaaattatttaca
gcaaagctaaatgttaatgagaatgtggaatgtggaaacaatacttgcacaaacaatgag
gtgcataaccttacagaatgtaaaaatgcgtctgtttccatatctcataattcatgtact
gctcctgataagacattaatattagatgtgccaccaggggttgaaaagtttcagttacat
gattgtacacaagttgaaaaagcagatactactatttgtttaaaatggaaaaatattgaa
acctttacttgtgatacacagaatattacctacagatttcagtgtggtaatatgatattt
gataataaagaaattaaattagaaaaccttgaacccgaacatgagtataagtgtgactca
gaaatactctataataaccacaagtttactaacgcaagtaaaattattaaaacagatttt
gggaaaaaagattgcctcaatctggataaaaacctgatcaaatatgatttgcaaaattta
aaaccttatacgaaatatgttttatcattacatgcctacatcattgcaaaagtgcaacgt
aatggaagtgctgcaatgtgtcatttcacaactaaaagtgctcctccaagccaggtctgg
aacatgactgtctccatgacatcagataatagtatgcatgtcaagtgtaggcctcccagg
gaccgtaatggcccccatgaacgttaccatttggaagttgaagctggaaatactctggtt
agaaatgagtcgcataagaattgcgatttccgtgtaaaagatcttcaatattcaacagac
tacacttttaaggaaagggcaggatttcacattaaacttagtgaatatttaagtcaggat
aattctaaggcactgatagcatttctggcatttctgattattgtgacatcaatagccctg
cttgttgttctctacaaaatctatgatctacataagaaaagatcctgcaatttagatgaa
cagcaggagcttgttgaaagggatgatgaaaaacaactgatgaatgtggagccaatccat
gcagatattttgttggaaacttataagaggaagattgctgatgaaggaagactttttctg
gctgaatttcagagcatcccgcgggtgttcagcaagtttcctataaaggaagctcgaaag
ccctttaaccagaataaaaaccgttatgttgacattcttccttgtcccagggatgaaact
gttgatgatttctggaggatgatttgggaacagaaagccacagttattgtcatggtcact
cgatgtgaagaaggaaacaggaacaagtgtgcagaatactggccgtcaatggaagagggc
actcgggcttttggagatgttgttgtaaagatcaaccagcacaaaagatgtccagattac
atcattcagaaattgaacattgtaaataaaaaagaaaaagcaactggaagagaggtgact
cacattcagttcaccagctggccagaccacggggtgcctgaggatcctcacttgctcctc
aaactgagaaggagagtgaatgccttcagcaatttcttcagtggtcccattgtggtgcac
tgcagtgctggtgttgggcgcacaggaacctatatcggaattgatgccatgctagaaggc
ctggaagccgagaacaaagtggatgtttatggttatgttgtcaagctaaggcgacagaga
tgcctgatggttcaagtagaggcccagtacatcttgatccatcaggctttggtggaatac
aatcagtttggagaaacagaagtgaatttgtctgaattacatccatatctacataacatg
aagaaaagggatccacccagtgagccgtctccactagaggctgaattccagagacttcct
tcatataggagctggaggacacagcacattggaaatcaagaagaaaataaaagtaaaaac
aggaattctaatgtcatcccatatgactataacagagtgccacttaaacatgagctggaa
atgagtaaagagagtgagcatgattcagatgaatcctctgatgatgacagtgattcagag
gaaccaagcaaatacatcaatgcatcttttataatgagctactggaaacctgaagtgatg
attgctgctcagggaccactgaaggagaccattggtgacttttggcagatgatcttccaa
agaaaagtcaaagttattgttatgctgacagaactgaaacatggagaccaggaaatctgt
gctcagtactggggagaaggaaagcaaacatatggagatattgaagttgacctgaaagac
acagacaaatcttcaacttatacccttcgtgtctttgaactgagacattccaagaggaaa
gactctcgaactgtgtaccagtaccaatatacaaactggagtgtggagcagcttcctgca
gaacccaaggaattaatctctatgattcaggtcgtcaaacaaaaacttccccagaagaat
tcctctgaagggaacaagcatcacaagagtacacctctactcattcactgcagggatgga
tctcagcaaacgggaatattttgtgctttgttaaatctcttagaaagtgcggaaacagaa
gaggtagtggatatttttcaagtggtaaaagctctacgcaaagctaggccaggcatggtt
tccacattcgagcaatatcaattcctatatgacgtcattgccagcacctaccctgctcag
aatggacaagtaaagaaaaacaaccatcaagaagataaaattgaatttgataatgaagtg
gacaaagtaaagcaggatgctaattgtgttaatccacttggtgccccagaaaagctccct
gaagcaaaggaacaggctgaaggttctgaacccacgagtggcactgaggggccagaacat
tctgtcaatggtcctgcaagtccagctttaaatcaaggttcatag

>gi568815597f:198539269_198856178|GENSCAN_predicted_peptide_5|396_aa
MSFVSHIASGKEANIIPTGREAVPMDDPRRDPNDEVEAWKRRHFQECIMEGLCRTRTKPL
NYTKLSMIDQRFDGNPTAFLEKIREALPQDPSGQGHKLLDIERNTSAEEDASSWTSRGRR
GEQTSGRAHDAGTPAGHQSSAGKYQSTINPSNEKNNNSLKDKVDVEEKKKTSQHLGKIER
TYVEILGNGSPDNFVYSHGVNQGLWYCTKQDEKFVRTLRSFFTAIHNLLERQLAPVEMIN
VTRWILSGYSLHKWVTGRGCNSLEGSEEDRKICEALNHLRDLLNGFGQNADSDIDNEIQA
EVVSDGDVQLLGNWSKGRSCHALAKRLAAFCPCPRDLWNFELQRHKLGCRDERESGEGCI
LRLLHLEHSNHEQSSSHDRCPRLVSTDPSSCSARVT

>gi568815597f:198539269_198856178|GENSCAN_predicted_CDS_5|1191_bp
atgagctttgtatcacatatagcttcagggaaggaggcaaatattatcccaactggaaga
gaagcagtaccaatggatgaccctagacgggatcctaatgatgaggtggaagcctggaag
aggagacactttcaggagtgcataatggaaggcttatgtagaactaggaccaagcctctc
aattacactaagttgtccatgattgaccagagatttgatggaaaccccactgccttcctg
gagaagataagagaggccctgcctcaagaccctagcgggcagggacacaagctgctggat
atcgagaggaatacatccgcggaagaagatgcaagcagctggacgtcaagaggacgtcga
ggggagcaaaccagtggaagagcacacgacgctggcacaccggcaggccatcagagttcg
gccgggaaataccaaagcacaatcaacccatcaaacgaaaaaaacaacaacagcctaaaa
gacaaggttgatgtggaggagaaaaaaaagaccagccaacacttagggaaaatagaaaga
acctacgttgaaatattggggaatggttcccctgataactttgtgtactcccatggtgtt
aatcagggcttatggtattgcactaagcaggatgaaaaatttgtgagaactttgagatca
ttttttactgcaatacacaatttattggagagacaacttgctcctgtggagatgattaat
gtcacaaggtggattttaagtggatactcactacacaaatgggtaacaggtaggggctgc
aacagtttggagggctcagaagaagacaggaagatttgtgaggctttgaatcatcttaga
gacttgttgaatggttttggccaaaatgctgatagtgatatagacaatgaaattcaggct
gaagtggtctcagatggagatgtgcaacttcttgggaactggagcaaaggtcgctcttgc
catgctttagcaaagagactggcggcattttgcccctgccctagagatctgtggaatttt
gaacttcagagacataagttagggtgtcgggatgaaagagagagtggagaaggatgtatt
cttcgcctgctacatcttgaacacagcaaccacgagcagtcttcatcccatgaccgctgc
ccccgccttgtttccacagacccaagctcctgcagtgctcgagtcacatga

>gi568815597f:198539269_198856178|GENSCAN_predicted_peptide_6|86_aa
MKGEEREVPGSEEAPMVILQLSVPLRGQLSDYKVGLRPLSLLPEAEGEIILKCKSDDVTP
LLKASNDPTFTQRKRGSPCNGPPERM

>gi568815597f:198539269_198856178|GENSCAN_predicted_CDS_6|261_bp
atgaaaggggaagaaagagaagttccagggtctgaagaggcaccaatggtaatacttcag
ttgagtgtgccattacgtggtcagctgagtgactataaagttggtctgcgtcctctgtct
cttcttcctgaggcagagggagaaatcattttgaaatgtaaatctgatgatgtcactcct
ctccttaaagccagtaatgaccccacttttacacagagaaagagaggaagtccctgcaat
ggccccccagaacgcatgtga