GENSCAN 1.0	Date run: 24-Oct-119	Time: 21:55:42

Sequence gi568815591f:30963265_31206681 : 243417 bp : 47.12% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    805    861   57  0  0   99   84   100 0.971  10.24
 1.02 Intr +   5567   5672  106  1  1   71   47   133 0.412   7.29
 1.03 Intr +   5799   5906  108  1  0   85   94    13 0.600   1.86
 1.04 Intr +   6603   6700   98  1  2   15   94    67 0.791  -0.27
 1.05 Intr +   7855   7952   98  0  2  115   72   178 0.891  17.71
 1.06 Intr +   8699   8861  163  2  1   73   75   161 0.991  13.28
 1.07 Intr +  10721  10874  154  1  1   58   72   122 0.930   7.25
 1.08 Intr +  11165  11225   61  0  1  101   77    93 0.997   7.29
 1.09 Intr +  11707  11776   70  1  1  129   44   118 0.974  10.68
 1.10 Intr +  12513  12640  128  2  2  115   55    64 0.992   5.28
 1.11 Intr +  13165  13294  130  1  1   77   94   128 0.999  13.00
 1.12 Intr +  14017  14058   42  0  0   72   85    66 0.860   3.14
 1.13 Term +  20305  20397   93  0  0   98   53   110 0.433   6.33
 1.14 PlyA +  21930  21935    6                               1.05

 2.06 PlyA -  22021  22016    6                               1.05
 2.05 Term -  24456  24295  162  0  0  119   46    50 0.100   1.84
 2.04 Intr -  32952  32738  215  1  2   28   89   119 0.134   4.43
 2.03 Intr -  34613  34534   80  1  2  108    8    17 0.032  -5.11
 2.02 Intr -  40603  40470  134  1  2   58   70    71 0.323   1.74
 2.01 Init -  40781  40632  150  2  0   38  101   120 0.743   8.34
 2.00 Prom -  46533  46494   40                              -7.06

 3.03 PlyA -  46993  46988    6                               1.05
 3.02 Term -  53340  53209  132  0  0   65   49   107 0.791   2.59
 3.01 Init -  56625  56467  159  0  0   71   68   110 0.786   7.13
 3.00 Prom -  58223  58184   40                              -5.96

 4.04 PlyA -  59007  59002    6                               1.05
 4.03 Term -  59225  59115  111  2  0  137   43    45 0.439   3.46
 4.02 Intr -  70886  70789   98  0  2   79  107   112 0.804  11.93
 4.01 Init -  77996  77939   58  2  1   79  105    44 0.725   6.67
 4.00 Prom -  80106  80067   40                              -6.06

 5.00 Prom +  82499  82538   40                              -3.86
 5.01 Init +  82675  82754   80  0  2   83   47     6 0.169  -3.47
 5.02 Intr +  85041  85293  253  0  1   83   47   118 0.503   4.64
 5.03 Term +  89169  89597  429  2  0   43   48   228 0.573   9.60
 5.04 PlyA +  91258  91263    6                               1.05

 6.00 Prom +  93124  93163   40                              -5.56
 6.01 Init +  94968  95025   58  2  1   75   81    40 0.267   3.48
 6.02 Intr +  95081  95230  150  0  0   93   70    54 0.310   4.23
 6.03 Intr +  99930 100051  122  1  2  100   91    32 0.330   4.91
 6.04 Intr + 101567 101750  184  1  1  113   81   182 0.603  19.36
 6.05 Intr + 114727 114834  108  2  0  112   98   109 0.911  14.56
 6.06 Intr + 115477 115599  123  2  0   43   53    91 0.717   1.66
 6.07 Intr + 117349 117369   21  2  0  126   91    16 0.494   3.22
 6.08 Intr + 118449 118490   42  1  0   98  110    21 0.918   3.51
 6.09 Intr + 120877 120986  110  2  2   87  109    85 0.988  10.50
 6.10 Intr + 121473 121570   98  2  2   85   97   166 0.999  16.01
 6.11 Intr + 122046 122178  133  0  1   43   74   197 0.997  14.45
 6.12 Intr + 123120 123319  200  2  2  141   89   290 0.804  32.55
 6.13 Intr + 124363 124432   70  1  1   96  101    19 0.841   3.18
 6.14 Intr + 129380 129471   92  1  2  115   89    93 0.619  10.89
 6.15 Intr + 133705 133799   95  1  2   69   76    80 0.804   4.51
 6.16 Intr + 136832 136946  115  0  1   96   84    50 0.996   4.91
 6.17 Intr + 139320 139400   81  0  0   90   94    44 0.938   3.95
 6.18 Intr + 139973 140102  130  2  1   63   96   132 0.993  12.20
 6.19 Intr + 141604 141645   42  0  0   87   94    14 0.557   0.34
 6.20 Term + 143232 143420  189  2  0   78   52   205 0.999  13.35
 6.21 PlyA + 148190 148195    6                               1.05

 7.06 PlyA - 149763 149758    6                               1.05
 7.05 Term - 158254 158088  167  2  2   51   50    99 0.268   0.48
 7.04 Intr - 159382 159351   32  0  2   66   87    23 0.558  -2.23
 7.03 Intr - 160347 160176  172  1  1   -1   98   139 0.474   5.00
 7.02 Intr - 161883 161799   85  0  1   44  101    56 0.456   1.89
 7.01 Init - 210512 210510    3  2  0  106  101     0 0.450   3.10
 7.00 Prom - 212871 212832   40                               0.44

 8.04 PlyA - 213573 213568    6                               1.05
 8.03 Term - 216810 216694  117  0  0   94   37    37 0.598  -2.26
 8.02 Intr - 217159 217083   77  2  2   63  116    11 0.544   0.63
 8.01 Init - 219753 219645  109  0  1   43   98   103 0.342   7.18

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 101922 102028  107  1  2  117   49    50 0.968   2.57
S.002 Init - 107657 107526  132  2  0   76   64    94 0.812   5.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:30963265_31206681|GENSCAN_predicted_peptide_1|435_aa
MDRRMWGAHVFCVLSPLPTQVLGHMHPECDFITQLREDESACLQAAEEMPNTTLGCPATW
DGLLCWPTAGSGEWVTLPCPDFFSHFSSESGAVKRDCTITGWSEPFPPYPVACPVPLELL
AEEESYFSTVKIIYTVGHSISIVALFVAITILVALRRLHCPRNYVHTQLFTTFILKAGAV
FLKDAALFHSDDTDHCSFSTVMAMGEGAGQVLCKVSVAASHFATMTNFSWLLAEAVYLNC
LLASTSPSSRRAFWWLVLAGWGLPVLFTGTWVSCKLAFEDIACWDLDDTSPYWWIIKGPI
VLSVGVNFGLFLNIIRILVRKLEPAQGSLHTQSQYWYCVFVSGDTGKGRLSKSTLFLIPL
FGIHYIIFNFLPDNAGLGIRLPLELGLGSFQGFIVAILYCFLNQEGFADWAYDADSWADP
LTGKLFLSQDSSFHN

>gi568815591f:30963265_31206681|GENSCAN_predicted_CDS_1|1308_bp
atggaccgccggatgtggggggcccacgtcttctgcgtgttgagcccgttaccgacccag
gtattgggccacatgcacccagaatgtgacttcatcacccagctgagagaggatgagagt
gcctgtctacaagcagcagaggagatgcccaacaccaccctgggctgccctgcgacctgg
gatgggctgctgtgctggccaacggcaggctctggcgagtgggtcaccctcccctgcccg
gatttcttctctcacttcagctcagagtcaggggctgtgaaacgggattgtactatcact
ggctggtctgagccctttccaccttaccctgtggcctgccctgtgcctctggagctgctg
gctgaggaggaatcttacttctccacagtgaagattatctacaccgtgggccatagcatc
tctattgtagccctcttcgtggccatcaccatcctggttgctctcaggaggctccactgc
ccccggaactacgtccacacccagctgttcaccacttttatcctcaaggcgggagctgtg
ttcctgaaggatgctgcccttttccacagcgacgacactgaccactgcagcttctccact
gtaatggccatgggtgaaggggctgggcaggttctatgcaaggtctctgtggccgcctcc
catttcgccaccatgaccaacttcagctggctgttggcagaagccgtctacctgaactgc
ctcctggcctccacctcccccagctcaaggagagccttctggtggctggttctcgctggc
tgggggctgcccgtgctcttcactggcacgtgggtgagctgcaaactggccttcgaggac
atcgcgtgctgggacctggacgacacctccccctactggtggatcatcaaagggcccatt
gtcctctcggtcggggtgaactttgggctttttctcaatattatccgcatcctggtgagg
aaactggagccagctcagggcagcctccatacccagtctcagtattggtactgtgtgttt
gtgtctggggatactgggaaagggcgtctctccaagtcgacacttttcctgatcccactc
tttggaattcactacatcatcttcaacttcctgccagacaatgctggcctgggcatccgc
ctccccctggagctgggactgggttccttccagggcttcattgttgccatcctctactgc
ttcctcaaccaagagggattcgcagactgggcctacgatgcagattcctgggcagatcct
ttgactggcaagctcttcctctctcaggactccagcttccacaactga

>gi568815591f:30963265_31206681|GENSCAN_predicted_peptide_2|246_aa
MDASQRYKIPGSETKDFITHSKSTSQSCIGLLRFSDITQVPQRQCKGPMMESNTELGTFA
TSLASGKKPGLFLVGGVTASLMAAHGKYSPAKQPGEEQEMKASICVSPAERPAAGPLICP
PTVLQAGVKRVTREAPRPRFKLSYDVSMSVMTEQEGEEPAPVSSSAERSEHATYFMRLNR
RWKWSIQHRAWHMNSSSAPPPSPSTEYSTPFQQTLQQGPCGIAQMLSDKHLQVPGASAFG
AKPNPE

>gi568815591f:30963265_31206681|GENSCAN_predicted_CDS_2|741_bp
atggatgccagccaaagatacaagattcctgggtcagagacaaaggacttcatcactcac
agcaaaagcactagccagagctgcataggattgcttcggttctccgacatcacccaagtc
ccacaaagacaatgcaaagggcccatgatggagagtaacactgagcttggaacatttgcc
acttctctagcgagtggaaagaaacctggtcttttcctggtgggaggtgttactgcatct
ctcatggctgctcatggcaaatacagccctgcgaaacagcccggtgaggagcaagaaatg
aaagccagcatctgcgtgtcacctgcagagcgccctgcagctggtcctctcatttgccct
ccaacagtgctgcaggctggtgtgaagagagtgacccgggaagctccaagacccagattt
aaactcagttatgacgtttccatgagtgtcatgactgagcaagaaggtgaagagcccgcg
cctgtttcctcatctgcggaacggagcgaacacgccacctacttcatgagacttaacaga
cgatggaagtggagcattcagcacagagcctggcacatgaactcttcctctgcaccccca
cccagccctagcaccgaatactccactcccttccagcagaccctccagcagggaccctgt
ggcattgcacaaatgctctctgacaaacacctacaagtccctggtgcctcagcctttggg
gcaaaacccaaccctgaataa

>gi568815591f:30963265_31206681|GENSCAN_predicted_peptide_3|96_aa
MGDKEEEKVQSITWCQVLLPHIFPGPPHSPHRPTPEWSAAPPAGIGGAMEEVWPPEQGEN
WMNSGGEHGMMMSHQTAPQWDFAFTSDPRLPIQVVE

>gi568815591f:30963265_31206681|GENSCAN_predicted_CDS_3|291_bp
atgggggacaaggaggaggagaaagtccagagcatcacctggtgtcaagtactcctgcct
cacatcttcccaggccctccccacagcccccaccgccccacccctgaatggtcagctgct
cctcctgctggcattggtggtgctatggaggaagtgtggcctcctgaacaaggagagaat
tggatgaacagtggtggagagcatggcatgatgatgtcccaccagactgcacctcagtgg
gacttcgccttcacatcggaccccaggcttccaattcaggttgtggaatga

>gi568815591f:30963265_31206681|GENSCAN_predicted_peptide_4|88_aa
MDSLGDKVLEEAQCEKQLEEGFFIDKALGSAGSVVEGKLLMGKLVTGNAQRLHLPGTDGC
SRALLTPFDSEAILFLPAPCAAHHPPFS

>gi568815591f:30963265_31206681|GENSCAN_predicted_CDS_4|267_bp
atggacagtttgggggataaggtgctagaagaagcgcagtgtgaaaagcagttggaagag
ggctttttcatcgacaaagcacttggttctgcgggcagtgtggttgaaggcaagctgctg
atggggaaattagtgacagggaacgcacagaggctgcatctacctgggactgatggctgc
tctcgggccttgctgacaccctttgattcggaagctattctcttcctccctgctccatgt
gctgctcatcacccgcctttctcctga

>gi568815591f:30963265_31206681|GENSCAN_predicted_peptide_5|253_aa
MDEAGNHHSKQTITRTENQTPYVLTHRLFVRQLQGFLELLEYSLKIMDLSNLTFIPLVSQ
RIPSVLGTRVHGVTEKVLDGIGSSDEDATSWLLYETSGERSALDLLGPASGGVTAAAAAP
GERGPRVRTRTRRRAGTHGPRPPAGHTGAETRLGARSSAHTLPIPAPRGPRTCRLRVLCG
VCPGPTDRPRSEQVRVAPPRLPLHASAVFSPSRTFAQPGPRIPSSGLAVSASRDLHRRRA
GEGRRQASLPDLK

>gi568815591f:30963265_31206681|GENSCAN_predicted_CDS_5|762_bp
atggatgaagctggaaatcatcattctaagcaaactatcacaaggacagaaaaccaaaca
ccatatgttctcactcataggctttttgtgaggcagcttcaaggatttctagagctcttg
gaatacagtttgaaaatcatggatctaagcaacctaaccttcattcccttggtttctcag
aggattccaagcgtcctggggaccagggtccatggggtgactgaaaaggttctagatggc
attggttcatctgatgaggatgctacctcctggctcctctatgagacatcaggggaaagg
agtgcacttgaccttctagggcctgcttctgggggagtgacggcggcggcggcggctccg
ggcgagcgtggtccccgcgtgcgcacacgcacacgccgccgcgcagggacacacggaccc
cggccgccagccggccacacaggcgcggagacccggctcggcgcgcgctcctcggcgcac
acgctccccatccccgcgccgcgcgggccgcggacttgcaggctgcgcgtcctttgcgga
gtctgccccggccccacggacaggccccgcagtgagcaggtaagggtcgccccgccgcgg
ctgcccctccacgcctcggccgtcttctccccctccagaaccttcgcccagccgggacct
cggatcccctcctctggcttggcggtctccgccagccgcgacctccaccgacggagagcg
ggcgagggccggcgccaggcaagcctcccagatctgaaatga

>gi568815591f:30963265_31206681|GENSCAN_predicted_peptide_6|720_aa
MAGGSLSPLCTEMWKVFEPRATTSWCSDSEEDMAAVVSFTPGSVAGLMRPEEERGMVCYW
DPPEFPYSPAQRHIGADLPLLSVGGQWCWPRSVMAGVVHVSLAALLLLPMAPAMHSDCIF
KKEQAMCLEKIQRANELMGFNDSSPGERGGREHATSPVPAFRTVFLCSGSASCPGMWDNI
TCWKPAHVGEMVLVSCPELFRIFNPDQGSYTGSRWEELDLGLPGERVPHTGSSATVLSVT
CGRGLGGAVWETETIGESDFGDSNSLDLSDMGVVSRNCTEDGWSEPFPHYFDACGFDEYE
SETGDQDYYYLSVKALYTVGYSTSLVTLTTAMVILCRFRKLHCTRNFIHMNLFVSFMLRA
ISVFIKDWILYAEQDSNHCFISTVECKAVMVFFHYCVVSNYFWLFIEGLYLFTLLVETFF
PERRYFYWYTIIGWGRFLAVAWTGSGPVVSCWDMNDSTALWWVIKGPVVGSIMVNFVLFI
GIIVILVQKLQSPDMGGNESSIYLAVAQPTLHTTAAEAFLEFGPHRNCAGSPADRSDRSA
NLVTPSSCVQKCYCKPQRAQQHSCKMSELSTITLAFSSTFDSVSQQEVPPAQLEIADAQG
PRLARSTLLLIPLFGIHYTVFAFSPENVSKRERLVFELGLGSFQGFVVAVLYCFLNGEVQ
AEIKRKWRSWKVNRYFAVDFKHRHPSLASSGVNGGTQLSILSKSSSQIRMSGLPADNLAT

>gi568815591f:30963265_31206681|GENSCAN_predicted_CDS_6|2163_bp
atggctggagggtctctgagtcccctctgcacggagatgtggaaagtcttcgagcccagg
gccaccacttcctggtgcagcgactcagaggaggacatggctgctgtagtcagtttcact
ccaggttcggtggctgggcttatgaggcctgaggaggaaaggggaatggtgtgctattgg
gatccccctgaattcccttacagtccagcccagagacacattggggctgacctgccgctg
ctgtcagtgggaggccagtggtgctggccaagaagtgtcatggctggtgtcgtgcacgtt
tccctggctgctctcctcctgctgcctatggcccctgccatgcattctgactgcatcttc
aagaaggagcaagccatgtgcctggagaagatccagagggccaatgagctgatgggcttc
aatgattcctctccaggtgagcggggcggcagggagcatgccacgtccccagtgccagct
tttagaactgttttcctgtgctcaggctcggccagctgtcctgggatgtgggacaacatc
acgtgttggaagcccgcccatgtgggtgagatggtcctggtcagctgccctgagctcttc
cgaatcttcaacccagaccaaggcagttacacgggctcaagatgggaggagctggacctt
gggctacctggggagagggtgccacacacggggagcagtgccacagtgctgtcggtgact
tgtggacgtgggcttggaggcgcggtctgggagaccgaaaccattggagagtctgatttt
ggtgacagtaactccttagatctctcagacatgggagtggtgagccggaactgcacggag
gatggctggtcggaacccttccctcattactttgatgcctgtgggtttgatgaatatgaa
tctgagactggggaccaggattattactacctgtcagtgaaggccctctacacggttggc
tacagcacatccctcgtcaccctcaccactgccatggtcatcctttgtcgcttccggaag
ctgcactgcacacgcaacttcatccacatgaacctgtttgtgtcgttcatgctgagggcg
atctccgtcttcatcaaagactggattctgtatgcggagcaggacagcaaccactgcttc
atctccactgtggaatgtaaggccgtcatggttttcttccactactgtgttgtgtccaac
tacttctggctgttcatcgagggcctgtacctcttcactctgctggtggagaccttcttc
cctgaaaggagatacttctactggtacaccatcattggctggggtaggttcctggctgtg
gcttggacaggttcaggtcccgtggtcagctgctgggatatgaatgacagcacagctctg
tggtgggtgatcaaaggccctgtggttggctctatcatggttaactttgtgctttttatt
ggcattatcgtcatccttgtgcagaaacttcagtctccagacatgggaggcaatgagtcc
agcatctacttggctgtagcccaaccaaccctgcacaccacagctgcggaagcatttctg
gagtttggccctcatagaaactgtgctggatccccggctgacagatctgacagaagtgct
aatcttgtcacacccagcagctgcgtgcagaaatgctactgcaagccacagcgggctcag
cagcactcttgcaagatgtcagaactgtccaccattactctagcattctcttccaccttt
gactcagtttcccagcaggaggttcctcctgcccagttggagattgccgatgcccagggt
ccgcgactggcccggtccaccctgctgctcatcccactattcggaatccactacacagta
tttgccttctccccagagaatgtcagcaaaagggaaagactcgtgtttgagctggggctg
ggctccttccagggctttgtggtggctgttctctactgttttctgaatggtgaggtacaa
gcggagatcaagcgaaaatggcgaagctggaaggtgaaccgttacttcgctgtggacttc
aagcaccgacacccgtctctggccagcagtggggtgaatgggggcacccagctctccatc
ctgagcaagagcagctcccaaatccgcatgtctggcctccctgctgacaatctggccacc
tga

>gi568815591f:30963265_31206681|GENSCAN_predicted_peptide_7|152_aa
MSLEKLSSMKPVPDAKKIGNRCFRRLPLCAGATDVNHRGGPNQRQGGWAVTPTSLSHWLP
ATLDEKGEGGSLTPQKSASNCLQKRAGLSDCGWVTARWRGLSIATTSFPGPKCEAWNLPT
PFPGSEDEDEDWAFMGELSMASTNPGASPSGF

>gi568815591f:30963265_31206681|GENSCAN_predicted_CDS_7|459_bp
atgtccctggaaaaattgtcttccatgaaaccagtccctgatgccaaaaagattgggaac
cgctgctttagaaggctgcctctctgcgcaggagccactgatgtcaaccacagaggtggt
cccaaccagaggcaaggcggctgggcggttacccctacatccctcagtcactggctaccg
gccaccctggatgagaaaggtgaagggggtagtcttacccctcagaaatctgccagcaat
tgtctgcagaagagggcagggctaagtgactgtggttgggtcacggcccgctggaggggc
ctttccattgccactacatcatttccagggcctaagtgtgaggcctggaacctgcctact
cctttcccaggaagtgaggatgaggatgaggattgggctttcatgggagaactctccatg
gcttctaccaaccctggggccagtcccagtggattctag

>gi568815591f:30963265_31206681|GENSCAN_predicted_peptide_8|100_aa
MNIDAKISNKILANQIQQHIKKQIHYDQVGFIPEMQGEIDALPRIGLGVKTKAACPLCGK
EKHFQLSFSLTPTSAPNPEGPLGFGPESRVMLSGGMGTSG

>gi568815591f:30963265_31206681|GENSCAN_predicted_CDS_8|303_bp
atgaacatagatgcaaaaatctccaacaaaatactagcaaatcaaatccagcagcacatc
aaaaagcaaatccactatgatcaagtaggctttatccctgagatgcaaggtgaaattgat
gcactgcccagaataggcttgggggtaaaaaccaaggctgcttgccctctgtgcggaaag
gaaaagcatttccagctttccttctcactcacaccaacatcagctcctaatcctgaaggc
cctctgggtttcggtccagagagcagagtgatgctctctggtggtatgggcacctctgga
tag