GENSCAN 1.0	Date run:  5-Nov-116	Time: 06:24:21

Sequence gi568815597r:230603144_230810850 : 207707 bp : 44.54% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    121    116    6                               1.05
 1.03 Term -   7540   7530   11  2  2  126   44     1 0.514  -2.14
 1.02 Intr -   9282   9053  230  2  2   90   42   123 0.220   5.41
 1.01 Init -  21858  21827   32  0  2  105   73    40 0.205   3.44
 1.00 Prom -  24099  24060   40                              -2.16

 2.00 Prom +  35124  35163   40                              -0.76
 2.01 Init +  39464  39535   72  1  0   91   91   119 0.008  13.57
 2.02 Intr +  56321  56482  162  1  0  118   25   208 0.695  17.67
 2.03 Intr +  57615  57680   66  2  0   62  119    90 0.713   8.60
 2.04 Intr +  59998  60078   81  0  0   62   69    83 0.900   3.63
 2.05 Intr +  61341  61444  104  2  2   97  111   -23 0.919  -0.13
 2.06 Intr +  65533  65641  109  1  1   71  131    27 0.915   5.59
 2.07 Intr +  66213  66392  180  2  0   80   58   153 0.886  11.56
 2.08 Intr +  68373  68497  125  2  2   98   91    68 0.967   7.48
 2.09 Intr +  71855  71981  127  2  1   77   55    40 0.211   0.28
 2.10 Intr +  75770  75909  140  1  2   95   81     5 0.178  -0.24
 2.11 Intr +  80431  80492   62  1  2   91   93    48 0.937   3.98
 2.12 Intr +  81942  82093  152  1  2  105   94    22 0.962   4.38
 2.13 Intr +  83792  83989  198  1  0   33  115   166 0.971  13.35
 2.14 Intr +  86871  87010  140  2  2   81   97    72 0.969   6.66
 2.15 Intr +  88241  88421  181  2  1   65   91   165 0.982  14.37
 2.16 Intr +  92089  92204  116  0  2   78   82    49 0.528   2.55
 2.17 Term +  98485  98554   70  1  1   76   54    62 0.047  -0.99
 2.18 PlyA +  98603  98608    6                               1.05

 3.05 PlyA -  98815  98810    6                               1.05
 3.04 Term - 100186  99998  189  1  0  119   54   138 0.956  10.95
 3.03 Intr - 101194 101050  145  0  1   93   87   175 0.781  18.18
 3.02 Intr - 103057 102790  268  2  1   97   74   333 0.985  29.39
 3.01 Init - 107680 106852  829  1  1   67  116  1011 0.998  94.68
 3.00 Prom - 121091 121052   40                              -2.06

 4.00 Prom + 127966 128005   40                              -4.56
 4.01 Init + 144354 145167  814  2  1   99   33   190 0.235   9.65
 4.02 Intr + 147917 148053  137  0  2   61  101    61 0.611   4.99
 4.03 Intr + 152194 152263   70  0  1   99   92    51 0.654   5.35
 4.04 Intr + 156369 156487  119  1  2   75  110    71 0.822   8.18
 4.05 Intr + 159510 159643  134  2  2   45   89   219 0.975  17.14
 4.06 Intr + 163298 163438  141  2  0   69   45    71 0.474   0.37
 4.07 Intr + 164398 164566  169  1  1  127   95   213 0.999  25.85
 4.08 Intr + 166037 166120   84  1  0   88   96    58 0.988   6.62
 4.09 Intr + 168871 168956   86  0  2  118   82   108 0.993  11.82
 4.10 Intr + 170877 170971   95  0  2   85   50    30 0.522  -1.49
 4.11 Intr + 171411 171546  136  1  1   77   60    76 0.549   3.33
 4.12 Intr + 175451 175516   66  2  0   80   61    55 0.393   0.02
 4.13 Intr + 175830 175990  161  0  2   96   69   173 0.757  15.83
 4.14 Intr + 177036 177193  158  1  2   32   92   109 0.943   5.43
 4.15 Intr + 177357 177565  209  2  2   92  117   211 0.992  22.28
 4.16 Intr + 182838 182874   37  0  1   99  105    31 0.941   4.16
 4.17 Intr + 184379 184459   81  1  0   43   75    77 0.400   1.73
 4.18 Intr + 186989 187046   58  1  1   66   89    36 0.310  -0.04
 4.19 Intr + 189209 189351  143  0  2   96   34   146 0.981  10.07
 4.20 Intr + 189707 189827  121  1  1   77   84   115 0.749  10.07
 4.21 Intr + 192020 192136  117  0  0  109   97   251 0.979  28.54
 4.22 Intr + 194810 194968  159  0  0   63   31   132 0.758   4.96
 4.23 Term + 203958 204154  197  1  2   96   41    77 0.052   1.37
 4.24 PlyA + 205356 205361    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  39570  39240  331  0  1   73   65   282 0.815  20.26
S.002 Init + 111626 111680   55  1  1   62  115    31 0.871   4.66


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:230603144_230810850|GENSCAN_predicted_peptide_1|90_aa
MGTQGDSHKARSPAIMNDTVTIWTRELMTNQLLQRKQMVIDILNTGKATVPKTEILEKLV
KIYKTTLDVIFVFGFRTYFGGGKIADFGAA

>gi568815597r:230603144_230810850|GENSCAN_predicted_CDS_1|273_bp
atggggacccagggagactcgcacaaggcgagatcacctgccatcatgaatgacacagta
actatctggaccagggaactcatgaccaaccaactacttcaaaggaaacaaatggtcata
gatatccttaacactgggaaggcaacagtaccaaagacagaaattctggaaaaattagtc
aaaatatacaagaccacactggatgtcatctttgtatttggattcagaacttattttggt
ggtggcaagatagctgactttggtgcagcctga

>gi568815597r:230603144_230810850|GENSCAN_predicted_peptide_2|694_aa
MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM
VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ
EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL
QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT
RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS
EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS
QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH
RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT
GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQEVPTTASSYVDSAL
KPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQARK
TTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQLFPVTKANLKPSQEGSRGEHRSSLAKP
IQCKATSVATWSSSEKLGILQPFRRVHVCQLYPL

>gi568815597r:230603144_230810850|GENSCAN_predicted_CDS_2|2085_bp
atggagaaaagtaggatgaacctgcccaaggggccggacacgctctgcttcgacaaggac
gagttcatgaaggaagatttcgatgtcgatcattttgtgtctgactgtaggaagcgggtc
cagctggaagaactgagagatgacctggagctctactataaacttcttaaaacagccatg
gtcgaactcatcaacaaggattatgcagattttgtcaatctttcaacaaacttggttggc
atggacaaagccctcaaccagctttctgtgcctttgggacaattacgagaagaggttctg
agccttagatcgtctgtcagtgaaggaattcgggcagttgatgaacgaatgtctaaacaa
gaggacattaggaaaaaaaagatgtgtgtattgaggcttatacaagttattcggtcagtt
gagaaaattgaaaaaatcttaaactctcaaagttctaaagaaacctctgcactagaagca
agcagcccccttttgactggacaaattttggagagaattgccacagaatttaatcagtta
cagtttcatgctgttcaaagcaaaggcatgcctcttttggacaaagtaagaccgcgtata
gctggcattacagccatgttacagcagtcactggaaggtctcctattagaaggccttcag
acgtctgacgtcgatataatacggcactgcttgcggacttacgccacgattgacaagaca
cgggacgcggaggccttagttggccaagtactagtgaaaccatacatagacgaggtgatt
atagagcagtttgttgaatctcatcccaatggccttcaggtcatgtataataaactcctg
gagtttgttcctcaccattgccgccttcttcgagaagtcacaggaggtgccatctccagt
gaaaaaggcaatactgttcctggatatgactttttggtgaattctgtttggccacaaata
gtacaaggattagaagaaaagttaccctcgctttttaatcctgggaatcccgatgcattt
catgagaaatataccataagtatggattttgtcagaagattggaacggcagtgtggatca
caggctagtgtaaagagattaagagcccatcctgcctatcacagcttcaataagaagtgg
aacttgcctgtttattttcaaataagatttagagaaatagcgggatccttagaagcagca
cttacagatgtcctggaagatgccccagctgaaagtccgtattgccttttggcttctcat
agaacttggagcagccttaggaggtgttggtcagatgagatgttcttgccattactggtg
catcgcctgtggagactcactctgcagattttggcacgatactctgtgtttgtcaatgag
ctttcactcaggcccatttctaatgaaagtcccaaggagatcaagaaacctttggtaact
ggtagcaaagaaccttccatcacccaaggaaacactgaagaccaaggaagtggtccttcg
gaaacaaagcctgtggtttccatttcccgcactcagctcgtgtatgtggttgcagacctg
gacaagcttcaggagcaggaggtcccaaccacagcttcctcctatgtggacagtgctctg
aagcccttattccagcttcagagcggacacaaggataagctcaaacaagcaataattcag
cagtggctagaaggcactctcagtgaaagcactcataagtactatgaaaccgtgtcagat
gtattaaactctgtgaagaagatggaagagagcctgaaaaggctgaaacaagccagaaaa
accactcccgccaaccccgtcggtcccagtggtggcatgagcgacgacgacaaaatcagg
ctgcagttggccctagatgttgagtacttgggagagcagctgtttcctgtgaccaaggcc
aacctcaaaccatcccaggaagggagtcgtggggaacacaggtccagcctcgctaagccg
atccagtgcaaagctacctcagtagccacatggagttcttccgagaaacttggcatcttg
cagccgtttcggagagtccatgtgtgccagctctacccgctttga

>gi568815597r:230603144_230810850|GENSCAN_predicted_peptide_3|476_aa
MAPAGVSLRATILCLLAWAGLAAGDRVYIHPFHLVIHNESTCEQLAKANAGKPKDPTFIP
APIQAKTSPVDEKALQDQLVLVAAKLDTEDKLRAAMVGMLANFLGFRIYGMHSELWGVVH
GATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNCTSRLDAHKVLSALQAVQG
LLVAQGRADSQAQLLLSTVVGVFTAPGLHLKQPFVQGLALYTPVVLPRSLDFTELDVAAE
KIDRFMQAVTGWKTGCSLMGASVDSTLAFNTYVHFQGKMKGFSLLAEPQEFWVDNSTSVS
VPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPHYASDLDKVEGLTFQQNSLNWM
KKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDRIRVGEVLNSIF
FELEADEREPTESTQQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANPLSTA

>gi568815597r:230603144_230810850|GENSCAN_predicted_CDS_3|1431_bp
atggctcctgccggtgtgagcctgagggccaccatcctctgcctcctggcctgggctggc
ctggctgcaggtgaccgggtgtacatacaccccttccacctcgtcatccacaatgagagt
acctgtgagcagctggcaaaggccaatgccgggaagcccaaagaccccaccttcatacct
gctccaattcaggccaagacatcccctgtggatgaaaaggccctacaggaccagctggtg
ctagtcgctgcaaaacttgacaccgaagacaagttgagggccgcaatggtcgggatgctg
gccaacttcttgggcttccgtatatatggcatgcacagtgagctatggggcgtggtccat
ggggccaccgtcctctccccaacggctgtctttggcaccctggcctctctctatctggga
gccttggaccacacagctgacaggctacaggcaatcctgggtgttccttggaaggacaag
aactgcacctcccggctggatgcgcacaaggtcctgtctgccctgcaggctgtacagggc
ctgctagtggcccagggcagggctgatagccaggcccagctgctgctgtccacggtggtg
ggcgtgttcacagccccaggcctgcacctgaagcagccgtttgtgcagggcctggctctc
tatacccctgtggtcctcccacgctctctggacttcacagaactggatgttgctgctgag
aagattgacaggttcatgcaggctgtgacaggatggaagactggctgctccctgatggga
gccagtgtggacagcaccctggctttcaacacctacgtccacttccaagggaagatgaag
ggcttctccctgctggccgagccccaggagttctgggtggacaacagcacctcagtgtct
gttcccatgctctctggcatgggcaccttccagcactggagtgacatccaggacaacttc
tcggtgactcaagtgcccttcactgagagcgcctgcctgctgctgatccagcctcactat
gcctctgacctggacaaggtggagggtctcactttccagcaaaactccctcaactggatg
aagaaactatctccccggaccatccacctgaccatgccccaactggtgctgcaaggatct
tatgacctgcaggacctgctcgcccaggctgagctgcccgccattctgcacaccgagctg
aacctgcaaaaattgagcaatgaccgcatcagggtgggggaggtgctgaacagcattttt
tttgagcttgaagcggatgagagagagcccacagagtctacccaacagcttaacaagcct
gaggtcttggaggtgaccctgaaccgcccattcctgtttgctgtgtatgatcaaagcgcc
actgccctgcacttcctgggccgcgtggccaacccgctgagcacagcatga

>gi568815597r:230603144_230810850|GENSCAN_predicted_peptide_4|1163_aa
MPYLYRAPGPQAHPVPKDARITHSSGQSFEQMRQECLQRGTLFEDADFPASNSSLFYSER
PQIPFVWKRPGVSGASRGRSIDEAEVQQPPQEVETGVLGRGRLRSVQLRCIIPVYRGKLC
SLEAENNVQAWDALRWGPGASGCTRSPAPSCLTPTEAEDLESEWVLSAGDRHESKPYPQG
QAPTLCVVTLRSRYAQCSVASGPELRVLSVDGCLAQQGLSNRVTDGIQGKQESSPENHAP
PIPRDQGEQCPTSDSLEVSSQEAPAGHWVPRGNSPPPILSVNPGHLPESAHTPLAHVNNP
CGRPVHSVACDHSLSCTEIVKNPEFILGGATRTDICQGELGDCWLLAAIASLTLNQKALA
RVIPQDQSFGPGYAGIFHFQFWQHSEWLDVVIDDRLPTFRDRLVFLHSADHNEFWSALLE
KAYANPSLTRRKNIRQILILQYACPGLLKTVKVIKNKDSLINCHSHKKPKDMLNGSYEAL
KGGSAIEAMEDFTGGVAETFQTKEAPENFYEILEKALKRGSLLGCFIDTRSAAESEARTP
FGLIKGHAYSVTGIDQVSFRGQRIELIRIRNPWGQVEWNGSWSDRTGTPSSQNPTWLASE
VTYKRCRVQTTSSMGRFLRSGVLLVQLSRSVCVTLLWMMGNSGTVLVPVLTADTSKSHGP
GAPPESCPAQDLVVQVSTQNVPHQMAFKDFKAHFDKVEICNLTPDALEEDAIHKWEVTVH
QGSWVRGSTAGGCRNFLDTFWTNPQIKLSLTEKDEGQEECSFLVALMQKDRRKLKRFGAN
VLTIGYAIYECPDKDEHLNKDFFRYHASRARSKTFINLREVSDRFKLPPGEYILIPSTFE
PHQEADFCLRIFSEKKAITRDMDGNVDIDLPEPPKPTPPDQETEEEQRFRALFEQVAGED
MEVTAEELEYVLNAVLQKIPELRSHEEPQVETLLMSPLTHMAQTSGNGKLEFDEFKVFWD
KLKQWINLFLRFDADKSGTMSTYELRTALKAAGKEKTGVQVADCMPGFQLSSHLLQLIVL
RYADEELQLDFDDFLNCLVRLENASRLDASIRSEKFTFSPPLMRVPSPPLMKVLVYHQME
QLPHRLHWKALWSLGNKLELRSALRGQGFRKPRACDLVGRGTRVIGASPIQCTGSLVETK
HHSTESQDRLPSTSAKAASSPQL

>gi568815597r:230603144_230810850|GENSCAN_predicted_CDS_4|3492_bp
atgccttacctctaccgggccccagggcctcaggcacacccggttcccaaggacgcccgg
atcacccactcctcaggccagagctttgagcaaatgaggcaggagtgcctgcagagaggc
accctgtttgaggatgcagacttcccagccagcaattcctccctgttctacagtgagagg
ccgcagatcccctttgtgtggaaacgaccaggggtgagtggggcgagcaggggaaggagc
atagatgaggccgaggttcagcagcccccgcaggaagtggaaacaggggtgctggggagg
ggccggctacgctcagtgcaactgaggtgcatcatcccagtctaccgtggaaagctttgc
agtttggaggcagaaaataatgtacaggcctgggatgctctgcggtggggacccggggca
tctggttgtacccgctccccggctccaagctgtctgactcccaccgaggctgaggacctg
gagtcagagtgggtcttgtcagcaggtgataggcacgaatcaaaaccttatccacaagga
caggcccccaccctgtgtgtggtaacactgagatcacgttatgcacagtgttctgtggct
tctggcccagagctgagggtgctcagtgtggatggatgtttggctcagcaaggtctcagc
aaccgggtgacagatggaatacaagggaagcaggaatcttctcccgagaaccatgcaccc
cccattcccagagatcagggtgaacagtgccccacctctgacagtctggaggtgtcgtcc
caagaggcaccagctggtcactgggtcccaagaggcaattcccccccaccaattctcagt
gtaaatccaggacacctccccgaaagtgcccacacccctctagcccatgtgaacaacccc
tgtggcagacctgtgcacagcgtggcatgtgaccacagcctctcctgcacggaaatcgtg
aaaaacccagaattcattcttggaggggccaccaggactgatatctgccagggagagctg
ggagactgctggctattagccgccatcgcctcccttacgcttaatcaaaaagcactggcc
agagtcatcccccaggaccaaagctttggccctggttatgccgggatattccatttccag
ttctggcagcacagtgagtggctggacgtggtgatcgatgaccgcctgcccaccttcagg
gaccgcttggttttcctccactctgccgaccacaacgagttctggagcgccttgctggaa
aaagcctacgccaaccctagtcttaccaggagaaaaaacattagacaaattctaatcctg
cagtatgcctgcccaggactcctcaaaaccgtcaaggtcatcaaaaacaaggacagtctt
ataaactgtcacagccacaaaaagcctaaggatatgctaaatgggagctatgaagctctg
aagggaggcagcgccatcgaggccatggaagacttcactgggggtgtggcagagaccttc
caaactaaagaggcccccgagaacttctatgagattctagagaaggctttgaagagaggc
tccctgctgggctgcttcattgataccagaagtgctgcagaatctgaggcccggacgccg
tttggtcttattaagggtcatgcctacagtgtaacgggaattgaccaggtaagcttccga
ggccagagaatcgagctcatccgaatccggaacccttggggccaggttgagtggaacggg
tcgtggagcgacaggacgggcacacctagctcacagaaccccacctggcttgccagcgag
gtcacatacaaaaggtgccgggtacagacaacatcaagcatgggcaggtttctccggagt
ggcgttctgttggtccagctgagcagaagcgtctgtgtcacactgctctggatgatgggg
aattctggtaccgtgcttgttcctgtgttaactgcagatacgagcaagtcccatggccct
ggggcacccccagagagctgccctgcccaggacctggtagttcaggtctccactcagaat
gtgccccatcagatggcatttaaggacttcaaggcccactttgataaagtggagatctgc
aacctcactcccgatgccctggaggaagacgcgatccacaaatgggaggtgacggtccat
cagggaagctgggttcgcggctccacggctgggggctgccgcaatttcctggataccttt
tggaccaatccacaaataaaattgtctctgactgagaaagatgaggggcaggaggagtgt
agtttccttgtagccctgatgcagaaagatagaaggaaactcaagagatttggtgccaat
gtgctgacaatcggctatgccatttatgagtgccctgacaaagacgaacacctgaacaaa
gacttcttcagataccacgcttctcgggccagaagcaagacgttcatcaacctgagagaa
gtctccgaccggttcaagctgccccctggggagtacatcctgattcccagcacttttgag
ccccaccaggaagctgatttctgtctgagaatcttttcagagaaaaaagccattacccgg
gatatggatggaaatgtagacattgaccttcctgagcctccaaagccaactccacctgac
caggagacagaggaggagcagcggtttcgggctctgtttgaacaagtcgctggtgaggac
atggaggtgacagcagaggaacttgagtatgttttaaatgctgtgctgcaaaagatccca
gagctgaggtcccacgaggagcctcaggttgaaacactgctcatgtctcccttaacccac
atggcacagaccagcggcaatgggaagctggagtttgatgaattcaaagtgttctgggac
aagctgaagcagtggattaaccttttccttcggtttgatgctgacaagtccggcaccatg
tctacctatgaactacggactgcactgaaagctgcaggtaaagaaaagactggagtacag
gtggctgactgcatgccaggctttcagctgagcagccacctcctgcagctgattgtgctc
aggtatgcggatgaggagctccagctggacttcgatgacttcctcaactgcctggtccgg
ctggagaatgcgagccgactggatgcctccatccgttcagagaagttcaccttcagcccg
cccttgatgagagtcccatcgccgcccttgatgaaagtccttgtttaccaccagatggag
cagcttccccacaggctccactggaaggccctttggtcgctgggaaacaaacttgagcta
cgcagtgcgctgaggggccagggcttcagaaagcccagagcatgtgacctggttggcaga
ggtaccagggtcattggtgccagcccaattcagtgtactggatcattagtagaaacaaag
caccattctactgagagccaagaccgcctgccaagtaccagtgcgaaggctgcctcgtca
ccacagctgtga