GENSCAN 1.0	Date run: 24-Oct-119	Time: 21:29:16

Sequence gi568815592r:117463257_117702288 : 239032 bp : 39.26% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  19526  19637  112  1  1   88   92   280 0.992  26.82
 1.02 Intr +  40511  40723  213  0  0  126   95   137 0.845  15.96
 1.03 Intr +  43350  43457  108  1  0   64   39    82 0.009   0.24
 1.04 Intr +  56560  56694  135  2  0   78   75   126 0.061   9.92
 1.05 Intr +  66942  67045  104  1  2   71   23   111 0.120   1.87
 1.06 Intr +  69004  69137  134  0  2   79   83   160 0.175  13.12
 1.07 Intr +  71772  71934  163  0  1   57   33    79 0.449  -1.64
 1.08 Intr +  73311  73371   61  2  1  107   63    65 0.682   3.29
 1.09 Intr +  75364  75579  216  2  0   94   61   167 0.974  12.15
 1.10 Intr +  75999  76123  125  1  2   33  116    91 0.998   5.78
 1.11 Intr +  77412  77559  148  2  1   62   97   142 0.983  11.39
 1.12 Intr +  77662  77769  108  2  0   96   80    75 0.968   6.84
 1.13 Intr +  79868  79955   88  0  1  116   25   122 0.974   6.81
 1.14 Intr +  81272  81321   50  2  2   77   77    90 0.976   4.21
 1.15 Intr +  81921  82112  192  1  0   95   -7   149 0.819   4.64
 1.16 Intr +  82222  82341  120  2  0   53  111   100 0.991   8.35
 1.17 Term +  84651  85183  533  1  2   81   47   757 0.864  64.32
 1.18 PlyA +  85514  85519    6                               1.05

 2.10 PlyA -  85792  85787    6                               1.05
 2.09 Term - 100128  99998  131  1  2  104   32   122 0.989   5.56
 2.08 Intr - 103778 103598  181  2  1  105   93   260 0.994  26.72
 2.07 Intr - 106480 106316  165  1  0   72   99   169 0.999  15.64
 2.06 Intr - 110376 110211  166  2  1   16   50   139 0.859   1.94
 2.05 Intr - 112096 111921  176  1  2   37   93    96 0.488   2.82
 2.04 Intr - 115808 115644  165  2  0   61  111   165 0.777  15.34
 2.03 Intr - 134161 134010  152  2  2   50   59   111 0.028   3.36
 2.02 Intr - 136915 136840   76  1  1   77   56    53 0.481  -0.83
 2.01 Init - 139032 138748  285  0  0   98   83   146 0.539  11.22
 2.00 Prom - 147552 147513   40                              -7.05

 3.00 Prom + 148904 148943   40                              -5.05
 3.01 Init + 157500 157561   62  2  2   54   94    29 0.161   0.87
 3.02 Intr + 171144 171350  207  0  0   69  113   173 0.877  15.17
 3.03 Intr + 171593 171774  182  2  2   66   73   155 0.498  10.39
 3.04 Intr + 171776 171903  128  0  2   -7   32   130 0.287  -2.62
 3.05 Intr + 178800 178900  101  2  2   75   21    63 0.496  -3.71
 3.06 Term + 181383 181809  427  0  1  127   38   304 0.880  23.09
 3.07 PlyA + 184240 184245    6                               1.05

 4.00 Prom + 187950 187989   40                              -3.65
 4.01 Init + 198786 198849   64  2  1   56  115    89 0.155   9.76
 4.02 Term + 206233 206531  299  2  2  -11   49   312 0.003  11.84
 4.03 PlyA + 207830 207835    6                              -0.45

 5.00 Prom + 211208 211247   40                              -5.85
 5.01 Init + 212415 212829  415  2  1   45  100   406 0.946  32.18
 5.02 Intr + 225386 225463   78  0  0   25   75   112 0.666   2.20
 5.03 Intr + 228477 228521   45  1  0   42  121    66 0.831   2.76
 5.04 Intr + 229786 229911  126  2  0   81  121    93 0.968  11.63
 5.05 Intr + 230775 230924  150  1  0   89   83   147 0.980  13.51

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 201570 201498   73  0  1   72   60    79 0.905   4.78


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:117463257_117702288|GENSCAN_predicted_peptide_1|869_aa
MVPGARGGGALARAAGRGLLALLLAVSAPLRLQAEELGDGCGHLVTYQDSGTMTSKNYPG
TYPNHTVCEKTITVPKGKRLILRLGDLDIESQTCASDYLLFTSSSDQYGMQKEEETEVLC
LSVAGAQRVDIPVQLLPSFLEGWKGPYCGSMTVPKELLLNTSEVTVRFESGSHISGRGFL
LTYASSDHPESQGDRPSEKTLDQQSRTFLATGTTFVKDSFSTDGTSLLCKAAIHAGIIAD
ELGGQISVLQRKGISRYEGILANGVLSREFEIFREQLFSSVLFYSWGNTVHAVIELMFPH
MIVWHSGKTREGSIAAEEEGVPKLYLVIQKQELVQDLVLVATVGCSRSLSFEPDGQIRAS
SSWQSVNESGDQVHWSPGQARLQDQGPSWASGDSSNNHKPREWLEIDLGEKKKITGIRTT
GSTQSNFNFYVKSFVMNFKNNNSKWKTYKGIVNNEEKVFQGNSNFRDPVQNNFIPPIVAR
YVRVVPQTWHQRIALKVELIGCQITQGNDSLVWRKTSQSTSVSTKKEDETITRPIPSEET
STGINITTVAIPLVLLVVLVFAGMGIFAAFRKKKKKGSPYGSAEAQKTDAMPVQIVGDHT
QMISQRENLGPDEGKIPFKGTAESMVRVVFAVVVNDLGMLFLAHTPEEDIDHYCWKQIKY
PFARHQSAEFTISYDNEKEMTQKLDLITSDMADYQQPLMIGTGTVTRKGSTFRPMDTDAE
EAGVSTDAGGHYDCPQRAGRHEYALPLAPPEPEYATPIVERHVLRAHTFSAQSGYRVPGP
QPGHKHSLSSGGFSPVAGVGAQDGDYQRPHSAQPADRGYDRPKAVSALATESGHPDSQKP
PTHPGTSDSYSAPRDCLTPLNQTAMTALL

>gi568815592r:117463257_117702288|GENSCAN_predicted_CDS_1|2610_bp
atggtgcccggcgcccgcggcggcggcgcactggcgcgggctgccgggcggggcctcctg
gctttgctgctcgcggtctccgccccgctccggctgcaggcggaggagctgggtgatggc
tgtggacacctagtgacttatcaggatagtggcacaatgacatctaagaattatcccggg
acctaccccaatcacactgtttgcgaaaagacaattacagtaccaaaggggaaaagactg
attctgaggttgggagatttggatatcgaatcccagacctgtgcttctgactatcttctc
ttcaccagctcttcagatcaatatggaatgcagaaggaggaggagacagaagtgctttgt
ctttcagtggctggcgctcagagagtggacattcctgtgcagctgttgcccagcttcctg
gaagggtggaagggtccatactgtggaagtatgactgttcccaaagaactcttgttgaac
acaagtgaagtaaccgtccgctttgagagtggatcccacatttctggccggggttttttg
ctgacctatgcgagcagcgaccatccagaatcacaaggtgacagaccttcagaaaagaca
ctagaccagcagtcccgaacctttttggcaacagggaccacttttgtgaaagacagtttt
tccacagacgggacctctttattgtgcaaagctgccatccatgcaggaataattgctgat
gaactaggtggccagatcagtgtgcttcagcgcaaagggatcagtcgatatgaagggatt
ctggccaatggtgttctttcgagggaatttgaaatcttcagggagcagttgttttcatct
gtgttgttttactcctggggaaacactgtacatgcggtcattgaacttatgttcccacac
atgattgtttggcattcaggaaaaaccagagaaggaagtattgcagctgaggaagaagga
gtccctaaactgtaccttgtcatccagaagcaggagctggttcaagacttggtgctggtt
gctacagtaggttgcagcagatccttgagttttgaacctgacgggcaaatcagagcttct
tcctcatggcagtcggtcaatgagagtggagaccaagttcactggtctcctggccaagcc
cgacttcaggaccaaggcccatcatgggcttcgggcgacagtagcaacaaccacaaacca
cgagagtggctggagatcgatttgggggagaaaaagaaaataacaggaattaggaccaca
ggatctacacagtcgaacttcaacttttatgttaagagttttgtgatgaacttcaaaaac
aataattctaagtggaagacctataaaggaattgtgaataatgaagaaaaggtgtttcag
ggtaactctaactttcgggacccagtgcaaaacaatttcatccctcccatcgtggccaga
tatgtgcgggttgtcccccagacatggcaccagaggatagccttgaaggtggagctcatt
ggttgccagattacacaaggtaatgattcattggtgtggcgcaagacaagtcaaagcacc
agtgtttcaactaagaaagaagatgagacaatcacaaggcccatcccctcggaagaaaca
tccacaggaataaacattacaacggtggctattccattggtgctccttgttgtcctggtg
tttgctggaatggggatctttgcagcctttagaaagaagaagaagaaaggaagtccgtat
ggatcagcagaggctcagaaaacagatgccatgccagtgcagattgtcggagaccatacc
cagatgatctcacaaagggagaatctgggacctgatgagggcaaaataccttttaaaggc
acagcggaaagcatggttagagtagtgtttgctgttgtggttaatgaccttggcatgctg
ttcttagcacacacacctgaggaggacattgatcactactgttggaagcagattaaatat
ccctttgccagacatcagtcagctgagtttaccatcagctatgataatgagaaggagatg
acacaaaagttagatctcatcacaagtgatatggcagattaccagcagcccctcatgatt
ggcaccgggacagtcacgaggaagggctccaccttccggcccatggacacggatgccgag
gaggcaggggtgagcaccgatgccggcggccactatgactgcccgcagcgggccggccgc
cacgagtacgcgctgcccctggcgcccccggagcccgagtacgccacgcccatcgtggag
cggcacgtgctgcgcgcccacacgttctctgcgcagagcggctaccgcgtcccagggccc
cagcccggccacaaacactccctctcctcgggcggcttctcccccgtagcgggtgtgggc
gcccaggacggagactatcaaaggccacacagcgcacagcctgcggacaggggctacgac
cggcccaaagctgtcagcgccctcgccaccgaaagcgggcaccctgactctcagaagccc
ccaacgcatcccgggacgagtgacagctattctgcccccagagactgcctcacacccctc
aaccagacggccatgactgcccttttgtga

>gi568815592r:117463257_117702288|GENSCAN_predicted_peptide_2|498_aa
MSAGGPCPAAAGGGPGGASCSVGAPGGVSMFRWLEVLEKEFDKAFVDVDLLLGEIDPDQA
DITYEGRQKMTSLSSCFAQLCHKAQSVSQINHKLEIPCQQEGSRLLEIWPLDLGLLCLHN
LLEVLARAIRQEKEIKDIQMVKEEVRLLLFADDMIVYLQSPKDSSIKLLELAQLVDLKSE
LTETQAEKVVLEKEVHDQLLQLHSIQLQLHAKTGQSADSGTIKAKLERELEANKKEKMKE
AQLEAEVKLLRKENEALRRHIAVLQAEVYGARLAAKYLDKELAGRVQQIQLLGRDMKGPA
HDKLWNQLEAEIHLHRHKTVIRACRGRNDLKRPMQAPPGHGGKEHGVPILISEIHPGQPA
DRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVYVAPEVDSDDENVEYE
DESGHRYRLYLDELEGGGNPGASCKDTSGEIKVLQGFNKKAVTDTHENGDLGTASETPLD
DGASKLDDLHTLYHKKSY

>gi568815592r:117463257_117702288|GENSCAN_predicted_CDS_2|1497_bp
atgtcggcgggcggtccatgcccagcagcagccggagggggcccagggggcgcctcctgc
tccgtgggggcccctggcggggtatccatgttccggtggctggaggtgctggagaaggag
ttcgacaaagcttttgtggatgtggatctgctcctgggagagatcgatccagaccaagcg
gacatcacttatgaggggcgacagaagatgaccagcctgagctcctgctttgcacagctt
tgccacaaagcccagtctgtgtctcaaatcaaccacaagctggagatcccctgccagcaa
gaaggctctcgacttctcgagatctggcccctcgaccttggacttctctgtctccataac
ttactagaagtcctagccagagcaatcagacaagagaaagaaataaaggacatccaaatg
gttaaagaggaagtcagactgttgctgtttgctgatgacatgatagtatacctacaaagc
cctaaggattcatccataaagctcctagaactggcacagttggtggatctgaaatctgaa
ctgacagaaacccaagcagagaaagttgttttggagaaagaagtacatgatcagctttta
cagctgcactctattcagctgcagcttcatgctaaaactggtcaaagtgctgactctggt
accattaaggcaaaattggaaagagagcttgaggcaaacaaaaaagaaaaaatgaaagaa
gcacaacttgaagctgaagtgaaattgttgagaaaagagaatgaagcccttcgtagacat
atagctgttctccaggctgaagtatatggggcgagactagctgccaagtacttggataag
gaactggcaggaagggtccaacagatacaattgctaggacgagatatgaagggacctgct
catgataagctttggaaccaattagaagctgaaatacatttgcatcgtcacaaaactgtg
atccgagcctgcagaggacgtaatgacttgaaacgaccaatgcaagcaccaccaggccat
ggtgggaaagaacatggtgttccaatcctcatctctgagatccatccggggcaacctgct
gatagatgcggagggctgcacgttggggatgctattttggcagtcaacggagttaaccta
agggacacaaagcataaagaagctgtaactattctttctcagcagagaggagagattgaa
tttgaagtagtttatgtggctcctgaagtggattctgatgatgaaaacgtagagtatgaa
gatgagagtggacatcgttaccgtttgtaccttgatgagttagaaggaggtggtaaccct
ggtgctagttgcaaagacacaagtggggaaatcaaagtattacaaggatttaataagaag
gcagtaactgacacacatgaaaatggagacctgggcactgcaagtgaaactccgctagat
gacggtgcttcaaaattagatgatctgcacactctgtatcataaaaaatcttattaa

>gi568815592r:117463257_117702288|GENSCAN_predicted_peptide_3|368_aa
MPNKFKAQNQIAAEFKSTLFRLPVKLQKLDCSNNLIQRVTAQDFQDLQDLKHLILDNNNA
SFFEAGALQRCSQLSNLALEQNLLLSIPLSEFLVSLASRIKPQTLTVSVTALKDGASGVC
SFRCSDVSGVSSFLWVRGLADFKSEAADLRMSVTAHKSSVDPKSEQQQDLLQAKEQSFHS
KERDATGLLLLAKTQNQSFLQEALVLSSKDWNSAAKICVLGVLMSLGLPGTLTRLDLKSN
VIQNIAEREIKDLKQLHVLNLRNNKISALDLKALEGLPHLRHLYLDGNPWNCTFSLLKAR
EVLMAKGTDVRGGQCAAPTEQHGESWMSSKEIMRQCKHHFHLTEKSKETKKKSKPEDPSS
IRINMDDG

>gi568815592r:117463257_117702288|GENSCAN_predicted_CDS_3|1107_bp
atgccaaataagtttaaagcacaaaatcaaatagctgcagaatttaaatccacgttgttc
cgactaccagtaaagctacaaaaacttgattgtagcaataatctgattcagagagtaaca
gcacaagacttccaggacctccaagacttgaaacatttgattctggacaacaacaatgcg
agtttcttcgaagctggagccctgcagaggtgttctcagctctccaacctggcgctggag
cagaatctgctgttgtccatacccctaagtgagttcttggtctcgctggcttcaagaata
aagccgcagaccctcacagtgagcgttacagctcttaaagatggtgcgtctggagtttgt
tccttcagatgttcagatgtgtccggagtttcttccttcttgtgggttcgtggtcttgct
gacttcaagagtgaagctgcagaccttcgcatgagtgttacagctcataaaagtagcgtg
gacccaaagagtgagcagcagcaagatttactgcaagcgaaagaacaaagcttccacagc
aaggaaagagacgcaaccgggttgctgctgctggctaagacacagaatcagtcatttctc
caagaagctctggttctttccagtaaagattggaattcagcagctaagatctgtgtgctt
ggtgtgctcatgtcattggggctcccagggaccttaaccaggctggacctaaaaagcaat
gtcatccagaatattgctgaacgggagatcaaggacctcaagcagcttcatgttctaaac
ctgaggaacaataagatctctgccttagacctaaaagccttagagggtctgcctcacctc
aggcacctgtacctggatggaaatccctggaattgcaccttcagtctcttaaaagcgaga
gaagtcctgatggccaagggcacagatgtaaggggaggacaatgtgcagcaccaactgaa
cagcatggggagagctggatgtcttccaaggagatcatgaggcaatgtaagcatcacttt
catctgaccgagaaaagtaaagagaccaaaaagaaatcaaaacctgaagacccctccagc
atcagaatcaacatggatgatggatga

>gi568815592r:117463257_117702288|GENSCAN_predicted_peptide_4|120_aa
MGKSLDEVMRAVPEALRQHSPDLWNYELGKHDLGYLVEEISKWQSVQEEAEPESSKRLQP
DNAVEKKNPFSGEKFKLAAEICISNEKPNANDPDKVSGWKCLQGMSENFTAAPPITGQEA

>gi568815592r:117463257_117702288|GENSCAN_predicted_CDS_4|363_bp
atgggaaagagtttggatgaagtaatgagggctgtccctgaagccttgcggcagcacagc
ccagatctgtggaactatgaacttgggaaacacgatttagggtatctggtagaagaaatt
tctaagtggcaaagtgttcaagaggaagctgagcctgaaagttcgaaacgtttgcagccc
gacaatgcagtagaaaagaaaaacccattttctggggagaaattcaagctggctgcagaa
atttgcataagtaacgagaagccaaatgctaatgacccagacaaggtgtcggggtggaag
tgtctccagggcatgtcagagaacttcacagcagcccctcccatcacaggccaggaggct
tag

>gi568815592r:117463257_117702288|GENSCAN_predicted_peptide_5|272_aa
MTGLYELVWRVLHALLCLHRTLTSWLRVRFGTWNWIWRRCCRAASAAVLAPLGFTLRKPP
AVGRNRRHHRHPRGGSCLAAAHHRMRWRADGRSLEKLPVHMGLVITEVEQEPSFSDIASL
VVWCMAVGISYISVYDHQVFRELALLDKPPRFGFVHSRMPTELQEYSPEFANSNDKDDQG
IFKRNNSRLMDEILKQQQELLGLDCSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKAD
IVRAAQDFCQLVAQKQKRPTDLDVDTLASLLX

>gi568815592r:117463257_117702288|GENSCAN_predicted_CDS_5|816_bp
atgacggggctgtacgagctggtgtggcgggtgctgcacgcgctgctctgtctgcaccgc
acgctcacctcctggctccgcgttcggttcggcacctggaactggatctggcggcgctgc
tgccgcgccgcctctgccgcggtcctagcgccgctcggcttcacgctccgcaagcccccg
gcagtcggcaggaaccgccgtcaccaccggcacccgcgcggggggtcgtgcctggcagcc
gcacaccaccggatgcgctggcgcgcggacggtcgttccttggagaagctgcctgtgcat
atgggcctggtgatcaccgaggtggagcaggaacccagcttctcggacatcgcgagcctc
gtggtgtggtgtatggccgtgggcatctcctacattagcgtctacgaccaccaagtgttc
cgagagctagctttattagataagccgccaaggtttggctttgttcactctcggatgcct
acagaacttcaagaatactcaccagaatttgcaaatagtaatgacaaagatgatcaaggt
attttcaaaagaaataattccagattgatggatgaaattttaaaacaacagcaagaactt
ctgggcctagattgttcaaaatactcaccagaatttgcaaatagtaatgacaaagatgat
caagttttaaattgccatttggcagtgaaggtgctgtctccggaagatggaaaagcagat
attgtaagagctgctcaggacttttgccagttagtagcccagaagcaaaagagacccaca
gatttggatgtagatacgttagccagtttacttann