GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:59:06

Sequence gi568815595f:16170953_16403559 : 232607 bp : 43.95% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4200   4738  539  2  2   82   93   433 0.840  35.54
 1.02 Intr +  12581  12619   39  2  0   68  121    15 0.064   0.14
 1.03 Intr +  24808  24974  167  1  2  140   63   272 0.393  29.50
 1.04 Intr +  29667  29871  205  1  1   93   93   144 0.633  13.66
 1.05 Intr +  37551  37718  168  0  0   57  109   137 0.951  11.76
 1.06 Intr +  40172  40289  118  2  1   88   95    78 0.521   8.97
 1.07 Intr +  41617  41811  195  0  0   91  116    85 0.524  11.21
 1.08 Intr +  48958  49062  105  0  0   91   94    69 0.995   8.21
 1.09 Intr +  51663  51806  144  2  0   75  105   124 0.955  13.28
 1.10 Term +  56402  56548  147  1  0  122   42   165 0.999  13.20
 1.11 PlyA +  58065  58070    6                               1.05

 2.00 Prom +  61683  61722   40                              -2.06
 2.01 Init +  72318  72423  106  2  1   79   71    85 0.574   6.28
 2.02 Term +  80644  80756  113  2  2   99   54    41 0.207   0.52
 2.03 PlyA +  81175  81180    6                               1.05

 3.04 PlyA -  81202  81197    6                               1.05
 3.03 Term -  81550  81417  134  2  2  112   41    65 0.287   2.45
 3.02 Intr -  88914  88839   76  0  1   49   98     9 0.054  -2.91
 3.01 Init -  93924  93817  108  0  0   85   88   167 0.652  16.62
 3.00 Prom -  99306  99267   40                              -0.46

 4.12 PlyA - 100657 100652    6                               1.05
 4.11 Term - 112745 112635  111  2  0  100   42    55 0.081   0.66
 4.10 Intr - 125147 125086   62  0  2   97   87    28 0.006   2.05
 4.09 Intr - 134162 134140   23  1  2   73  119   -15 0.004  -2.71
 4.08 Intr - 144706 144673   34  2  1   80  111    48 0.228   3.58
 4.07 Intr - 146280 145896  385  0  1   68   60   251 0.138  14.72
 4.06 Intr - 152505 152424   82  2  1   66  116    27 0.611   2.94
 4.05 Intr - 155924 155821  104  2  2  101   92   177 0.898  18.37
 4.04 Intr - 167017 166952   66  1  0   99   80    15 0.127   0.90
 4.03 Intr - 176733 176680   54  0  0   91  105   -11 0.099   0.08
 4.02 Intr - 187095 186980  116  1  2  146  100   104 0.994  17.57
 4.01 Init - 199325 199124  202  2  1   81   80   267 0.882  24.24
 4.00 Prom - 199993 199954   40                              -1.86

 5.03 PlyA - 200445 200440    6                               1.05
 5.02 Term - 207150 206704  447  0  0  118   36   141 0.074   7.12
 5.01 Init - 209226 209224    3  0  0   83  101     0 0.436   0.80
 5.00 Prom - 212697 212658   40                              -3.66

 6.00 Prom + 214617 214656   40                              -2.86
 6.01 Init + 216939 217038  100  2  1   56   50   135 0.456   4.93
 6.02 Intr + 217360 217384   25  2  1   93   98    23 0.235   0.88
 6.03 Intr + 230442 230541  100  0  1  111   68     1 0.000   0.51
 6.04 Intr + 231854 231958  105  1  0   27   55   103 0.000   1.31
 6.05 Term + 232081 232146   66  0  0   57   55    79 0.000  -0.56
 6.06 PlyA + 232550 232555    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +   7735   7960  226  1  1   67   46   148 0.852   4.75


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:16170953_16403559|GENSCAN_predicted_peptide_1|608_aa
MLLRKRYRHRPCRLQFLLLLLMLGCVLMMVAMLHPPHHTLHQTVTAQASKHSPEARYRLD
FGESQDWVLEAEDEGEEYSPLEGLPPFISLREDQLLVAVALPQARRNQSQGRRGGSYRLI
KQPRRQDKEAPKRDWGADEDGEVSEEEELTPFSLDPRGLQEALSARIPLQRALPEVRHPL
EQIAIEQLSEVRRCLQQHPQDSLPTASVILCFHDEAWSTLLRTVHSILDTVPRAFLKEII
LVDDLSQQGQLKSALSEYVARLEGVKLLRSNKRLGAIRARMLGATRATGDVLVFMDAHCE
CHPGWLEPLLSRIAGDRSRVVSPVIDVIDWKTFQYYPSKDLQRGVLDWKLDFHWEPLPEH
VRKALQSPISPIRSPVVPGEVVAMDRHYFQNTGAYDSLMSLRGGENLELSFKAWLCGGSV
EILPCSRVGHIYQNQDSHSPLDQEATLRNRVRIAETWLGSFKETFYKHSPEAFSLSKLHN
TGLGLCADCQAEGDILGCPMVLAPCSDSRQQQYLQHTSRKEIHFGSPQHLCFAVRQEQVI
LQNCTEEGLAIHQQHWDFQENGMIVHILSGKCMEAVVQENNKDLYLRPCDGKARQQWRFD
QINAVDER

>gi568815595f:16170953_16403559|GENSCAN_predicted_CDS_1|1827_bp
atgctcctaaggaagcgatacaggcacagaccatgcagactccagttcctcctgctgctc
ctgatgctgggatgcgtcctgatgatggtggcgatgttgcaccctccccaccacaccctg
caccagactgtcacagcccaagccagcaagcacagccctgaagccaggtaccgcctggac
tttggggaatcccaggattgggtactggaagctgaggatgagggtgaagagtacagccct
ctggagggcctgccaccctttatctcactgcgggaggatcagctgctggtggccgtggcc
ttaccccaggccagaaggaaccagagccagggcaggagaggtgggagctaccgcctcatc
aagcagccaaggaggcaggataaggaagccccaaagagggactggggggctgatgaggac
ggggaggtgtctgaagaagaggagttgaccccgttcagcctggacccacgtggcctccag
gaggcactcagtgcccgcatccccctccagagggctctgcccgaggtgcggcacccactt
gaacaaatagctattgaacaactatcagaagtaagaaggtgtctgcagcagcaccctcag
gacagcctgcccacagccagcgtcatcctctgtttccatgatgaggcctggtccactctc
ctgcggactgtacacagcatcctcgacacagtgcccagggccttcctgaaggagatcatc
ctcgtggacgacctcagccagcaaggacaactcaagtctgctctcagcgaatatgtggcc
aggctggagggggtgaagttactcaggagcaacaagaggctgggtgccatcagggcccgg
atgctgggggccaccagagccaccggggatgtgctcgtcttcatggatgcccactgcgag
tgccacccaggctggctggagcccctcctcagcagaatagctggtgacaggagccgagtg
gtatctccggtgatagatgtgattgactggaagactttccagtattacccctcaaaggac
ctgcagcgtggggtgttggactggaagctggatttccactgggaacctttgccagagcat
gtgaggaaggccctccagtcccccataagccccatcaggagccctgtggtgcccggagag
gtggtggccatggacagacattacttccaaaacactggagcgtatgactctcttatgtcg
ctgcgaggtggtgaaaacctcgaactgtctttcaaggcctggctctgtggtggctctgtt
gaaatccttccctgctctcgggtaggacacatctaccaaaatcaggattcccattccccc
ctcgaccaggaggccaccctgaggaacagggttcgcattgctgagacctggctggggtca
ttcaaagaaaccttctacaagcatagcccagaggccttctccttgagcaagctccacaac
actggacttgggctctgtgcagactgccaggcagaaggggacatcctgggctgtcccatg
gtgttggctccttgcagtgacagccggcagcaacagtacctgcagcacaccagcaggaag
gagattcactttggcagcccacagcacctgtgctttgctgtcaggcaggagcaggtgatt
cttcagaactgcacggaggaaggcctggccatccaccagcagcactgggacttccaggag
aatgggatgattgtccacattctttctgggaaatgcatggaagctgtggtgcaagaaaac
aataaagatttgtacctgcgtccgtgtgatggaaaagcccgccagcagtggcgttttgac
cagatcaatgctgtggatgaacgatga

>gi568815595f:16170953_16403559|GENSCAN_predicted_peptide_2|72_aa
MEVRPELGLISKEAQGCDTGHRNICNKSQPTKVPSAQKGSSPLEFAPSDKPGQLHPSIEI
VTCFLKVTSEQS

>gi568815595f:16170953_16403559|GENSCAN_predicted_CDS_2|219_bp
atggaagttcggccagagctggggctgatatccaaggaggcccaaggatgcgacactgga
caccgaaacatctgcaataagagccaaccaacaaaggttccctcagcccagaagggcagc
agtcctctcgagtttgccccttcagacaaaccaggacagcttcatccaagtatagaaata
gtcacctgctttctcaaagtcacatcagaacagagctga

>gi568815595f:16170953_16403559|GENSCAN_predicted_peptide_3|105_aa
MAVFHDEVEIEDFQYDEDSETYFYPCPCGDNFSITKVGVNVKFPWLVAVLLAYHSVVSLL
QASSLIHFSGAQQFVMQTVSNQDSSSHFKSDMIRVTIAETLNFGP

>gi568815595f:16170953_16403559|GENSCAN_predicted_CDS_3|318_bp
atggcagtgtttcatgacgaggtggaaatcgaggacttccaatatgacgaggactcggag
acgtatttctatccctgcccatgtggagataacttctccatcaccaaggtaggggttaac
gtcaaatttccatggctggtagctgtgcttttggcatatcacagtgttgtgtcactacta
caagcgagttccctgatacatttcagtggtgcccaacagtttgttatgcagactgtttca
aatcaggacagcagctctcacttcaagtctgatatgatccgcgtgaccatagctgaaacc
ttgaactttggaccttaa

>gi568815595f:16170953_16403559|GENSCAN_predicted_peptide_4|412_aa
MEIFTLFNKPKSHQKCRQYYPVTIPLHVSKNGQTVSGLDANWLEHMSDHFRKGGMLVNAV
FYLGIVNDSLHGLTDGVFIFEAVSTEDSKTIQGYDAIVVEQWTVLEFPFHRESSFQRGGG
VHTEGKLVALLGLTVGYHKLDFRAPEGVEVQTDYVPLLNSLAAYGWQLTCVLPTPVVKTT
SEGSVSTKQIVFLQRPCLPQKIKKKESKFQWRFSREEMHNRQMRKSKGKLSARDKQQAEE
NEKNLEDQSSKAGDMGNCVSGQQQEGGVSEEMKGPVQEDKGEQLSPGGLLCGVGVEGEAV
QNGPASHSRALVGICTGHSNPGEDARDGDAEEVRELERDGKWNSDATSLGTLGPTGGPST
ATKRNCVSIPSLQARAVEALKDSQTTTLLPPSADNSSLLFCQSQTDINTPHK

>gi568815595f:16170953_16403559|GENSCAN_predicted_CDS_4|1239_bp
atggagatcttcacccttttcaacaaaccgaagagccatcagaagtgccggcaatactac
cctgtcaccattcctctccatgtctccaagaatggccagacagtgagcggtttggacgcc
aactggttagagcacatgagcgaccacttccggaaaggaggcatgctggtgaacgcagtc
ttctaccttggaatagtgaatgattccttacatggcttgacagatggagtattcatcttt
gaagctgtttccacagaagatagcaaaaccatacagggctatgatgctattgtggttgaa
caatggacagtcctggaattcccctttcacagagaaagctccttccagagaggaggtggt
gtacacacagagggcaagctggtggcactgctgggcctcacagtaggttatcataaatta
gacttcagggctccagagggtgtcgaagtgcagacagactacgtgcccctgctgaactcg
ctggcggcctatggctggcagctcacctgtgtgctaccaactcccgtcgtcaagactacc
agcgaggggagtgtatccaccaagcagattgtctttcttcagagaccttgtctacctcag
aaaatcaagaagaaggaatcgaagtttcagtggcgattctccagagaagaaatgcacaac
aggcagatgaggaaatcaaaaggtaaactcagtgccagagacaaacaacaagcagaagaa
aatgagaagaacttagaagaccagtcttccaaagctggagacatgggaaactgtgtttca
ggacagcagcaggagggtggagtctccgaggagatgaagggccctgtccaagaggacaag
ggagaacagctgtcccctggtggcctgctgtgtggggtgggtgtggagggtgaggctgtg
cagaatggtcctgccagccacagcagggccctggtggggatttgcactgggcactccaat
cctggagaggatgccagggacggggatgctgaggaagtcagagagcttgaaagagatggc
aagtggaactcagatgccaccagcctgggcactttggggccaactggtgggccttctaca
gccacaaaacgcaactgtgtttccataccctctttgcaggcaagagctgttgaggccctc
aaggactcacagactactactctcctcccaccttctgctgacaactcatcattacttttc
tgccaatcacaaactgacatcaacactccccataagtaa

>gi568815595f:16170953_16403559|GENSCAN_predicted_peptide_5|149_aa
MIQEAASQGLKFVGVIPQYHSSVNSAGSSAPVSTANSTEDARDAKNARGDHASLENEKPG
TGDVCSAPAGRNQSPEPSSGPRGEVPLAKQPSSPSGEGDGGELSPQGVSKTLDGPESNPL
EVHEEPLSGSKYVSNGSFDPLKEQLTAFH

>gi568815595f:16170953_16403559|GENSCAN_predicted_CDS_5|450_bp
atgatccaggaggctgcaagccagggcctgaaattcgttggtgttatacctcagtaccat
tcctctgtgaactcggcaggcagcagtgctccggtgtctactgccaacagcaccgaggat
gccagagatgcaaaaaacgcacgtggggatcacgcgtcactggagaatgagaaaccgggg
actggggatgtgtgcagtgctccggctgggagaaaccaaagcccagagcccagctcaggc
cccagaggggaggtgcccctcgccaagcagcccagctcaccctccggagagggagatggt
ggagaactttcaccacagggggtgagcaagacactggatggaccggagagcaaccccttg
gaggtgcatgaagagccactctcagggagtaagtatgtcagcaatgggagttttgaccca
cttaaagagcagctaacagcttttcattaa

>gi568815595f:16170953_16403559|GENSCAN_predicted_peptide_6|131_aa
MLFLGLTTTFLLVFFLHAGLYTALTAARLVSERSSGTVPGTQHIYLSPWQEGLCLFYTMT
TALAKLTRGIQWPNPDSTLIEWDQPPLNGLHCKGSVGQCKMNLVLKEIREAGRGNFHQQN
LGGKGLEPILH

>gi568815595f:16170953_16403559|GENSCAN_predicted_CDS_6|396_bp
atgctcttccttggcctcaccaccacctttctgctggttttcttcctgcatgctggcctg
tatacagccctcacagcagccaggctggtatctgaaagatcatctggaactgttcctggt
acacaacacatttacttaagcccatggcaggaaggcctctgcctgttttatactatgaca
actgctcttgcaaaacttacccgtggcatccagtggccaaacccggacagtacactcatt
gagtgggaccagccgcccctcaacggtcttcattgcaaaggctcagtgggccagtgcaag
atgaacctagttcttaaggagatcagggaggcaggacgaggcaatttccatcagcagaac
ctgggcggcaagggcctggagcccatccttcactga