GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:57:27

Sequence gi568815588f:92211131_92451204 : 240074 bp : 42.93% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   5202   5663  462  2  0   82   55   473 0.932  39.31
 1.02 PlyA +   6159   6164    6                               1.05

 2.06 PlyA -   8673   8668    6                               1.05
 2.05 Term -  11404  11358   47  2  2  123   47    18 0.643  -2.41
 2.04 Intr -  15500  15414   87  0  0   97   54    48 0.532   1.32
 2.03 Intr -  15728  15650   79  2  1  144   76    14 0.797   4.01
 2.02 Intr -  29231  28216 1016  0  2  119   90  1169 0.179 109.66
 2.01 Init -  63153  63039  115  0  1   69   77    54 0.155   2.82
 2.00 Prom -  65852  65813   40                              -2.95

 3.00 Prom +  66309  66348   40                              -1.65
 3.01 Init +  77929  77931    3  0  0  103   81     0 0.351   0.85
 3.02 Intr +  79367  80477 1111  1  1  -16   85   575 0.314  35.21
 3.03 Term +  81020  81231  212  0  2  -18   43   208 0.736   2.17
 3.04 PlyA +  85503  85508    6                               1.05

 4.00 Prom +  99964 100003   40                              -6.05
 4.01 Init + 115791 115800   10  2  1   96  108     1 0.217   3.65
 4.02 Intr + 129543 129673  131  1  2  121   25    81 0.505   4.59
 4.03 Intr + 138219 138402  184  2  1   83  110    38 0.775   3.94
 4.04 Intr + 138541 138707  167  2  2  115   91    68 0.988   8.56
 4.05 Term + 139961 140077  117  1  0   86   41   116 0.996   4.26
 4.06 PlyA + 140204 140209    6                               1.05

 5.07 PlyA - 140414 140409    6                               1.05
 5.06 Term - 154276 153931  346  0  1   10   39   184 0.003  -1.32
 5.05 Intr - 176514 176347  168  2  0   81   66   110 0.023   6.24
 5.04 Intr - 184367 184248  120  1  0   81   15   110 0.031   1.69
 5.03 Intr - 185450 185348  103  0  1   37  131    66 0.425   4.11
 5.02 Intr - 194512 194451   62  0  2   57  121    45 0.754   2.16
 5.01 Init - 194709 194561  149  0  2   56   13   202 0.947   7.11
 5.00 Prom - 205695 205656   40                              -8.85

 6.00 Prom + 206467 206506   40                              -4.45
 6.01 Init + 208255 209099  845  0  2   57   50   429 0.068  30.19
 6.02 Intr + 209158 209234   77  1  2   39   18    69 0.073  -6.76
 6.03 Intr + 209445 209603  159  1  0   71  -10   167 0.006   4.24
 6.04 Term + 228925 229196  272  2  2   96   49   160 0.479   7.56
 6.05 PlyA + 229227 229232    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 166123 166003  121  1  1   52   74    69 0.824   2.30
S.002 Sngl - 200056 199838  219  1  0   71   47   196 0.935   8.71


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:92211131_92451204|GENSCAN_predicted_peptide_1|153_aa
MTKIKADPEGPEAQAEVCSGERTYQELLVNQNPIAQLLASRRLKRKLYKCIKKAVKQKQI
RRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVRCEDRNLPYVYIPSKTDLGAATGS
KRPTCVIMVKPHEEYQEAYDECLEEVQSLPLPL

>gi568815588f:92211131_92451204|GENSCAN_predicted_CDS_1|462_bp
atgaccaaaataaaggcagatcccgaagggcccgaggctcaggcggaggtgtgttccggg
gagcgcacctaccaggagctgctggtcaaccagaaccccatcgcgcagctcctggcttct
cgccgcctcaagcggaagctctacaaatgcattaagaaagcggtgaagcagaagcagatt
cggcgcggggtgaaagaggttcagaaatttgtcaacaaaggagaaaaagggatcatggtt
ttggcaggagacacactgcccattgaggtatactgccatctcccagttaggtgtgaggac
cgaaatctgccctatgtctatatcccctctaagacggacctgggtgcagccacaggctcc
aagcgccccacctgtgtgataatggtcaagccccacgaggagtaccaggaggcttacgac
gagtgcctggaggaggtgcagtccctgcccctacccctatga

>gi568815588f:92211131_92451204|GENSCAN_predicted_peptide_2|447_aa
MTAALREHLFGIYLLNICNGHVLGPSHALSQIVTTTLSAAQTMQDDLLMDKSKTQPQPQQ
QQRQQQQPQPESSVSEAPSTPLSSETPKPEENSAVPALSPAAAPPAPNGPDKMQMESPLL
PGLSFHQPPQQPPPPQEPAAPGASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQN
FPHHVNPVFGGTFSPQIGLAQTQHHQQPPPPAPAPQPAQPAQPPQAQPPQQRRSPASPSQ
APYAQRSAAAAYGHQPIMTSKPSSSSAVAAAAAAAAASSASSSWNTHQSVNAAWSAPSNP
WGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWM
EDNAFRTDNGNNLLPFQAPTPTGPFSQLLAPPAGLLPEPPLCPVECRLHKGKDLFTEVSP
GAVIVPGIFWAHELREFLLNFDNVLNK

>gi568815588f:92211131_92451204|GENSCAN_predicted_CDS_2|1344_bp
atgacagctgcactcagggagcacttgtttggcatctacttactgaacatctgcaatggg
catgtgttgggcccttcacatgcattatctcagatcgtgacgacaaccctttcagctgcg
caaaccatgcaggatgatttactgatggacaaaagcaaaacccagccccagccccagcag
cagcagcggcagcagcagcagccccaacctgagtccagcgtatccgaagccccgtccacg
cccctctcctcagagacccccaagccggaggaaaacagcgcagtgccggccctcagccca
gccgctgcccccccggcccccaacggcccggacaagatgcagatggaatcaccgctcctg
ccaggcttgagtttccatcagcctcctcagcagccgccgccgcctcaggagcccgcggca
ccgggcgcgtcgctgtcgccgtccttcggcagcacctggtccacgggcaccaccaacgcg
gtagaggacagcttcttccaggggatcaccccagtcaacgggaccatgctcttccagaac
ttcccgcaccatgtcaacccagtcttcggaggcactttctccccgcagatcggcctggcg
cagacccagcaccaccagcagccgccgccgcctgcgcccgcgccgcagccggcacagcca
gcgcagccaccacaggcgcagcccccgcagcagcgccgctcacccgccagccccagccag
gcgccctacgcgcagaggagcgccgccgcggcgtacggccaccagcccatcatgaccagc
aagccgtcctcgtcttcggcggttgcagccgctgctgccgcagccgccgcctcgtcggcc
tcgtccagctggaacacgcaccaaagcgtgaatgcagcctggagcgcaccgtccaacccc
tggggcggcctgcaggcgggccgggaccctcgccgggcggtcggtgtgggcgtgggtgtg
ggtgtcggggtgccttccccgctcaaccccatctcgccgctcaaaaagcccttctccagc
aacgtgatcgcgccgcccaagttccctcgcgcggcccctctcacttccaagtcctggatg
gaggataacgctttccggaccgataatggtaacaatctgttgccatttcaggcccccacc
cccacaggccccttctcccagctcctggcccctcctgcaggtctcctccctgagccccca
ctctgcccagtagaatgtaggctccacaagggcaaggaccttttcactgaagtgtctcca
ggggctgtgatagtaccagggatattttgggcacatgagctgagagaattcctgctgaac
tttgataacgttttgaataaatga

>gi568815588f:92211131_92451204|GENSCAN_predicted_peptide_3|441_aa
MTVGEPWKAQAHLRRFLERERIIFPSPNSPAPNTQRDSGGSCLVQAVPICPPPQEEPHAP
NQPTPRGGGVIPPKWALPQERLAPAPGASEGVSATPTAATDRPDATAGAGDPDKKWPFSP
LPSPGSVPPEGKSGGKNKQAGRADLVATDSGAAHPAASWKAARKTFFPPGGRKREGAGQT
AAGAEALVRAGCAASSGDGPKTTSPRLLWAALRRNPGAHGGGDSYLTKVAPPPAATRRPR
SMDRNLGPTDGNPGRDRRLPASGSSSSLSAASAGLPQALHRRRQASGAAPGSWVTGSRLP
PDCGLLRRLSVLLSLGLALSGSTGEGRVRRLRGRCRTKPYSRCWTGTGSCGGDREPPTLA
LALPAPALEALVYLTIVEFIEDVSARTGVQLPILGGPQSVKLFVKSGAPPSAVEILVRGS
YHEFLETLDPHFPRAKSYFLA

>gi568815588f:92211131_92451204|GENSCAN_predicted_CDS_3|1326_bp
atgactgtcggcgagccctggaaagcccaggcacatttgagaaggttcctggagagggag
agaatcatctttccttcccccaactccccagccccaaacacacagagagactcgggtgga
agctgtctggtccaggcagtccctatttgcccgccccctcaagaagaacctcacgcacca
aaccaaccgacccctcgcggaggtggtgtaattcccccaaaatgggctctgccgcaggag
aggctggctccagcgccgggggcttcggaaggagtttctgccacccccactgccgccact
gaccgccccgacgccacggccggggccggggaccctgataagaaatggcccttcagcccc
ctcccctcacctggctcggtcccacctgagggcaagagcggaggcaaaaacaaacaggca
gggagggctgaccttgttgctaccgacagtggagcggcgcatcctgctgcttcctggaaa
gcggcccgaaagacattttttccccctggaggaaggaaacgggagggcgccggccagacg
gcggcaggcgcggaggcgttggtccgggcgggctgtgcagcctctagtggagacggtccg
aagactacatctcccaggctgctctgggccgccctgcgtcgtaaccctggcgcgcacgga
ggcggcgactcttacctcacaaaggtagctcctccgccggcagcaactcggcgcccgcgg
tccatggaccggaacctcgggccgacggacgggaacccgggccgcgatcgccgcctcccc
gcctcaggctcctcctcctcgctctccgccgcctccgccggactcccgcaggccctgcac
cgccgccgccaggctagcggagctgccccgggaagctgggtgacgggttcgcggctgccg
ccggactgcggcctactccgccgcctctcagtgctattgtccctgggcctggccttgagc
gggtccactggggaaggccgtgtgcgccggctccgcggaagatgccggaccaagccctac
agcagatgctggacaggtacgggcagctgtgggggggaccgggagccgccgaccctcgct
ctggccctgcccgcgcccgccctcgaggctcttgtgtacttgacgatcgttgagttcatt
gaagacgtttcagctcgtacaggagtccagttgcccattcttggggggccccagtcggta
aaactctttgtgaagtcgggtgcaccgccctctgctgttgaaattctggtccgtgggtcc
taccatgagtttttggagactctagatccacatttcccccgagccaagtcttacttcctg
gcatag

>gi568815588f:92211131_92451204|GENSCAN_predicted_peptide_4|202_aa
MVPSPVVYVLDLADRLISKACPFAAAGIMVGSIYWTAVTYGAVTVMQVVGHKEGLDVMER
ADPLFLLIGLPTIPVMLILGKMIRWEDYVLRLWRKYSNKLQILNSIFPGIGCPVPRIPAE
ANPLADHVSATRILCGALVFPTIATIVGKLMFSSVNSNLQRTILGGIAFVAIKGAFKVYF
KQQQYLRQAHRKILNYPEQEEA

>gi568815588f:92211131_92451204|GENSCAN_predicted_CDS_4|609_bp
atggtgccaagtccagtggtttacgtcttggatcttgcagatagactgatctcaaaagcc
tgtccatttgctgcagcaggaataatggtcggctctatctattggacagctgtgacttat
ggagcagtgacagtgatgcaggttgtaggtcataaagaaggtctggatgttatggagaga
gctgatcctttattccttttaattggacttcctactattcctgtcatgctgatattaggc
aagatgattcgctgggaggactatgtgcttagactgtggcgcaaatactcgaataaacta
caaattttaaatagtatatttccagggataggttgtcctgttcctcgaattccagctgag
gccaatcctttagcagatcatgtctctgctactcgaatcttgtgtggagcccttgtcttt
cctactattgctacaatagttggtaaattgatgttcagtagtgttaactctaatttacaa
aggacaatcttgggtggaattgcgtttgttgccataaaaggagcatttaaagtttacttc
aaacagcagcaatatttacgacaggcacaccgcaaaattctgaattatccagaacaagaa
gaagcataa

>gi568815588f:92211131_92451204|GENSCAN_predicted_peptide_5|315_aa
MKVLGCLCSVAQAVFFPMLLLLSSHLHLVQEEPVLTMQPYAKGFDSAAALETRVAPGEDT
GLPGADAEEKGSCTLTIPQLITYNLGFPSWVLVPVAISAHGLLLRQAAFLVLACHGAVTA
AVQLGRELMEAGLLQKTADSYSYLRNQPSQSTWDVGLCSQCFYRAFPLIPIGSHVVNYCP
NSNDVSGPRIAVYMSHSSDRWANLRVISLKKEVEKKIGVESLFKGITENVPNLEKGINIQ
VQEGYRTPSRFNPKKTTSRHLIIKLPKVKDKERTLKAAREKKQNTQWSSNTSGSRLFSGN
LTNQEIVAEEKNLLS

>gi568815588f:92211131_92451204|GENSCAN_predicted_CDS_5|948_bp
atgaaggttctgggctgtctgtgctctgtggctcaagctgtgttcttcccgatgctgctg
ttgctctcctctcacctgcacttggtgcaggaggagccagtccttaccatgcaaccttat
gccaagggctttgattcagctgctgccttggagacaagggtggcccctggggaggatact
ggactcccaggagcagatgctgaggagaaaggctcctgcacactgaccatcccgcagctc
attacttacaatttaggtttcccttcctgggtgctggttcctgtggccatttcagctcat
gggttgctgctccgccaagcagcttttctagtcctggcctgccatggtgcagtgactgca
gctgtccagcttggcagggagctgatggaagcaggtcttctgcaaaagactgcggactcc
tattcctacctaagaaaccaaccaagtcagagtacctgggatgtgggactttgcagtcag
tgcttttatcgtgctttcccattgattccgattggcagccatgttgtaaactactgccct
aactctaatgacgtttcaggaccaaggatagcggtctacatgtcccactcctctgacaga
tgggcaaatctaagagttattagccttaaaaaggaggtagagaaaaagataggagtagaa
agcttattcaaaggaataacagagaacgtcccaaaccttgagaaaggtatcaatatccaa
gtacaagaaggttatagaacaccaagcagatttaacccaaagaagactacctcaaggcat
ttaataatcaaactcccaaaggtcaaggataaagaaaggaccctaaaagcagcaagagaa
aagaaacaaaacacacaatggagctccaatacgtctggcagcagacttttcagtggaaac
cttacaaatcaggagatagtggctgaagaaaaaaaccttttatcctag

>gi568815588f:92211131_92451204|GENSCAN_predicted_peptide_6|450_aa
MSPESENLLKKFLIVNCRKRGPSEHTVRGPWMNASHEGEELKRCVQPLSHWEDPLQTKFM
VSVGYRQEEIQDLLRSMRKQWSPACSWVLLSSQEVQLRVSASPEQQWFQQPAFPIFHGLR
RLKGATQSLNRIRRQGRRAATQQCTSQLPTSLEGTNPTPAVNSDLSTNTKMSRNSSLGAK
AGLARPPPRTTTAAPQRWGLRPPELLLLTSTPSPRPPARESQSVSLQPNQASVPHPTVSS
WGVPARHSPPRVSLRPPFYPRHQRSGQSPRWDQVRAAGQPNRRRPAEGRRELLQQVQVQV
HKLDSAAVFKRLSVEVHVVLLFRQPLGNGSKPLTAAAGARARGAEGLRARASTAHLLGSG
EMVIKKFPDLSGLTVGHKTPIPGSCSIPERKKCYNRDTKKNLNRQVLLGFLLSVYYIRSH
PLPQLYMTVHSSLHRSIQMDSFSYISGSSF

>gi568815588f:92211131_92451204|GENSCAN_predicted_CDS_6|1353_bp
atgtccccggagagtgaaaacttgctgaagaaatttctcattgtcaattgcaggaagaga
ggcccttcagagcacactgtgaggggtccatggatgaatgcgagtcatgaaggtgaggaa
cttaagcgctgtgtgcagccactctcccactgggaggaccccctgcaaactaagttcatg
gtatccgtgggttacagacaggaagagatccaggacttgctgaggagtatgaggaagcag
tggtcacctgcctgctcctgggttctcctttcatcccaggaggtacagctcagggtctct
gccagcccggagcagcagtggtttcaacaacctgcctttcccatctttcacggcctgaga
agactcaaaggagccacccagagtctgaacaggatcaggagacagggcagaagggcagca
acacagcaatgcaccagccagctccctactagcctggaggggacgaaccccacccccgct
gtgaacagcgacctctccactaacaccaaaatgagcaggaattcctcactcggggcaaaa
gccggtttggccagacctccacccagaacgacaacggcagccccacagcgctggggcctg
aggcctcctgagctcttgcttctcacctctaccccgtctccccggccaccagcccgggaa
tcccagtcggtctccttgcagcccaaccaggcctcggtgccgcaccccacagtgagcagc
tggggggtgcccgcccggcacagtccccccagagtgtccctgcggcctcccttctacccg
cgtcatcagcggagtgggcagagcccccgatgggaccaggtacgcgcggccgggcagccc
aacaggcggcggccagcagagggccgccgggagcttcttcagcaagttcaagttcaagtt
cacaagctggactcagctgccgtatttaaacgattgtcggtggaagttcacgtcgtgctc
ctctttcgacagccgttgggtaacggatcaaaacccttaacggccgcggctggagcgcga
gctcggggcgccgaggggctccgggcccgagcgtccaccgctcatctcctgggctcggga
gagatggtcataaagaaattccctgacctatctggcttgacagtaggtcataagaccccc
attccaggatcctgttccatacctgagaggaagaaatgctacaacagagacaccaagaag
aacctcaacagacaggtcttgctgggcttcctcctctcggtctactacattagatcacac
cctttgccacagttgtacatgactgtccactcttcattgcatcgaagcatacaaatggac
agtttttcctatatctctgggtcttcattttga