GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:52:45

Sequence gi568815597r:182546738_182771731 : 224994 bp : 43.45% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1580   1718  139  2  1  111   90   140 0.984  16.97
 1.02 Intr +   1963   2087  125  0  2   70   88   177 0.999  15.28
 1.03 Intr +   4363   4472  110  1  2  122   99    14 0.977   5.83
 1.04 Intr +   6718   6804   87  2  0  117   68    16 0.677   2.44
 1.05 Intr +   7890   7956   67  1  1   94   49    34 0.549  -1.94
 1.06 Intr +   9002   9128  127  2  1   93  100     8 0.454   3.18
 1.07 Term +  10276  10329   54  0  0   69   53    83 0.526   0.46
 1.08 PlyA +  10620  10625    6                               1.05

 2.08 PlyA -  12567  12562    6                               1.05
 2.07 Term -  17561  17545   17  0  2  115   43    11 0.167  -2.30
 2.06 Intr -  28841  28690  152  1  2   73   44    40 0.269  -2.09
 2.05 Intr -  29652  29519  134  0  2   91  106   115 0.838  13.04
 2.04 Intr -  34620  34488  133  2  1   41   86   140 0.796   9.75
 2.03 Intr -  35521  35316  206  1  2   49  107   108 0.819   6.80
 2.02 Intr -  37429  37344   86  2  2   58   84    78 0.997   3.94
 2.01 Init -  40069  38590 1480  1  1   97   95  1187 0.999 112.29
 2.00 Prom -  51361  51322   40                              -5.86

 3.17 PlyA -  51909  51904    6                               1.05
 3.16 Term -  53776  53555  222  1  0  152   47   255 0.999  24.72
 3.15 Intr -  55395  55229  167  1  2   91   50   173 0.978  13.48
 3.14 Intr -  55747  55683   65  0  2   95   87    55 0.736   4.46
 3.13 Intr -  56602  56492  111  0  0   98  100    59 0.994   7.59
 3.12 Intr -  57624  57479  146  0  2   14   94   120 0.820   4.28
 3.11 Intr -  58047  57918  130  2  1   81   80    57 0.693   4.90
 3.10 Intr -  68597  68373  225  1  0   87   51   109 0.000   4.20
 3.09 Intr -  88240  88042  199  2  1   78   77    66 0.183   2.91
 3.08 Intr -  90569  90446  124  2  1   74   59    59 0.388   1.76
 3.07 Intr - 100180 100094   87  1  0  129   20   100 0.369   7.47
 3.06 Intr - 101566 101400  167  2  2  104   85   137 0.999  14.68
 3.05 Intr - 122753 122655   99  0  0  102   85    24 0.214   3.58
 3.04 Intr - 123788 123726   63  0  0   71   93    37 0.140   1.19
 3.03 Intr - 133401 133332   70  0  1   51   75    49 0.001  -1.35
 3.02 Intr - 137723 137615  109  1  1   71  110    75 0.051   8.29
 3.01 Init - 158161 158100   62  1  2   66   94    35 0.212   2.62
 3.00 Prom - 158811 158772   40                              -4.46

 4.00 Prom + 158942 158981   40                              -5.16
 4.01 Init + 161595 161649   55  2  1   83  100    47 0.264   6.87
 4.02 Intr + 169880 169933   54  0  0   52   94    69 0.184   2.85
 4.03 Term + 171514 171824  311  2  2   37   43   155 0.120   1.12
 4.04 PlyA + 172058 172063    6                               1.05

 5.00 Prom + 175937 175976   40                              -4.66
 5.01 Init + 181744 181817   74  0  2   68   89   112 0.975   9.84
 5.02 Term + 223599 223758  160  0  1   36   48   135 0.043   1.71
 5.03 PlyA + 224268 224273    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 135144 135263  120  2  0  125   48   149 0.978  13.07


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:182546738_182771731|GENSCAN_predicted_peptide_1|236_aa
XFNDLVSSAHMLQVNRAYNENDVILMRSKMNIIQKLFLNSDIPPKLRVNVPEFQKDAILA
AITEGYLDRSVFHGAIMSVFPVVMYFWKRFCFWKATRSYLQYRGKKFKDRKSPPKSTDKY
PFSSGGDNAILRFTLLRGIEWLQPQREAISSVQNSSSSKLTQPRLVVSAMQLHPVQGDLK
LPRNYLPVPVPRRQTRYFEALYTGKAMHGFRVYKALGKKTFHKDEKGDVGAELMNT

>gi568815597r:182546738_182771731|GENSCAN_predicted_CDS_1|711_bp
nnatttaatgatctggtcagttcagcccacatgctgcaggtcaaccgggcatataatgag
aatgatgtgatcctaatgcggtccaaaatgaacattatccaaaaactcttcctgaattct
gacatccctccaaagctgagggtgaatgtccctgagttccagaaggatgccatccttgct
gccatcacagagggctacctagatcggagcgtcttccatggggctatcatgtctgtcttc
cccgttgttatgtacttctggaaaaggttttgtttctggaaggcaacccgctcttactta
cagtatagggggaagaagttcaaggacagaaaaagccctcctaaatctacggacaagtat
cctttctcgagtggaggagacaatgccatcttaaggttcaccttgctcagaggtattgag
tggttgcagcctcaacgggaagcaataagttcagttcaaaattcttcatcaagcaaactt
actcagccaagactcgtggtatctgccatgcagctgcatcccgtccagggggacttgaag
ctgcccaggaattatttgcccgtcccagtgcccagaagacaaaccagatactttgaagct
ctttacactggaaaagcaatgcatggcttcagagtttataaggccttggggaagaagact
tttcacaaggatgaaaaaggtgatgttggagcagaactcatgaacacctga

>gi568815597r:182546738_182771731|GENSCAN_predicted_peptide_2|735_aa
MESRDHNNPQEGPTSSSGRRAAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGW
TPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNE
CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH
VEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGK
TPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD
CGDLVMTARRNYDHSLVKVLLSHGAKEDFHPPAEDWKPQSSHWGAALKDLHRIYRPMIGK
LKFFIDEKYKIADTSEGGIYLGFYEKQEVAVKTFCEGSPRAQREVSCLQSSRENSHLVTF
YGSESHRGHLFVCVTLCEQTLEACLDVHRGEDVENEEDEFARNVLSSIFKAVQELHLSCG
YTHQDLQPQNILIDSKKAAHLADFDKSIKWAGDPQEVKRDLEDLGRLVLYVVKKGSISFE
DLKAQSNEEVVQLSPDEETKDLIHRLFHPGEHVRDCLSDLLGHPFFWTWESRYRTLRNVG
NESDIKTRKSESEILRLLQPGPSEHSKSFDKWTTKINECVMKKMNKFYEKRGNFYQNTVG
DLLKFIRNLGEHIDEEKHKKMKLKIGDPSLYFQKTFPDLVIYVYTKLQNTEYRKHFPQTH
SPNKPQCDGAAIKRM

>gi568815597r:182546738_182771731|GENSCAN_predicted_CDS_2|2208_bp
atggagagcagggatcataacaacccccaggagggacccacgtcctccagcggtagaagg
gctgcagtggaagacaatcacttgctgattaaagctgttcaaaacgaagatgttgacctg
gtccagcaattgctggaaggtggagccaatgttaatttccaggaagaggaagggggctgg
acacctctgcataacgcagtacaaatgagcagggaggacattgtggaacttctgcttcgt
catggtgctgaccctgttctgaggaagaagaatggggccacgccttttatcctcgcagcg
attgcggggagcgtgaagctgctgaaacttttcctttctaaaggagcagatgtcaatgag
tgtgatttttatggcttcacagccttcatggaagccgctgtgtatggtaaggtcaaagcc
ctaaaattcctttataagagaggagcaaatgtgaatttgaggcgaaagacaaaggaggat
caagagcggctgaggaaaggaggggccacagctctcatggacgctgctgaaaaaggacac
gtagaggtcttgaagattctccttgatgagatgggggcagatgtaaacgcctgtgacaat
atgggcagaaatgccttgatccatgctctcctgagctctgacgatagtgatgtggaggct
attacgcatctgctgctggaccatggggctgatgtcaatgtgaggggagaaagagggaag
actcccctgatcctggcagtggagaagaagcacttgggtttggtgcagaggcttctggag
caagagcacatagagattaatgacacagacagtgatggcaaaacagcactgctgcttgct
gttgaactcaaactgaagaaaatcgccgagttgctgtgcaaacgtggagccagtacagat
tgtggggatcttgttatgacagcgaggcggaattatgaccattcccttgtgaaggttctt
ctctctcatggagccaaagaagattttcaccctcctgctgaagactggaagcctcagagc
tcacactggggggcagccctgaaggatctccacagaatataccgccctatgattggcaaa
ctcaagttctttattgatgaaaaatacaaaattgctgatacttcagaaggaggcatctac
ctggggttctatgagaagcaagaagtagctgtgaagacgttctgtgagggcagcccacgt
gcacagcgggaagtctcttgtctgcaaagcagccgagagaacagtcacttggtgacattc
tatgggagtgagagccacaggggccacttgtttgtgtgtgtcaccctctgtgagcagact
ctggaagcgtgtttggatgtgcacagaggggaagatgtggaaaatgaggaagatgaattt
gcccgaaatgtcctgtcatctatatttaaggctgttcaagaactacacttgtcctgtgga
tacacccaccaggatctgcaaccacaaaacatcttaatagattctaagaaagctgctcac
ctggcagattttgataagagcatcaagtgggctggagatccacaggaagtcaagagagat
ctagaggaccttggacggctggtcctctatgtggtaaagaagggaagcatctcatttgag
gatctgaaagctcaaagtaatgaagaggtggttcaactttctccagatgaggaaactaag
gacctcattcatcgtctcttccatcctggggaacatgtgagggactgtctgagtgacctg
ctgggtcatcccttcttttggacttgggagagccgctataggacgcttcggaatgtggga
aatgaatccgacatcaaaacacgaaaatctgaaagtgagatcctcagactactgcaacct
gggccttctgaacattccaaaagttttgacaagtggacgactaagattaatgaatgtgtt
atgaaaaaaatgaataagttttatgaaaaaagaggcaatttctaccagaacactgtgggt
gatctgctaaagttcatccggaatttgggagaacacattgatgaagaaaagcataaaaag
atgaaattaaaaattggagacccttccctgtattttcagaagacatttccagatctggtg
atctatgtctacacaaaactacagaacacagaatatagaaagcatttcccccaaacccac
agtccaaacaagcctcagtgtgatggagctgcaataaagcgtatgtga

>gi568815597r:182546738_182771731|GENSCAN_predicted_peptide_3|681_aa
MGTCGVSASDDGADSDNVGPGCQEEVADSITQGLTEPCPAGARTSHTFPAALPTARQIGA
EFKKIGCLMGTRDCEDVNQDQVFCGNKGFEALRMGPSGEEDCLLCELHGSCLYASCKVVA
LQAGPALAEALPLTDGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFE
EFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKKSELLEKLEAWWEMVAKRHAA
KPAGNWTSQLSAQAVRFQAAGDSVERLVSAKRTHPHAEGQHLGLLCSHGDKLALSREQLL
ATCSPVQAKPFSEQECRSLIPRIQGWSLRGPVGPPLLPGRASPSGAAGRGAHKSFGAGHL
ARTGLAMGSRPKRRVPGDCFSLAGTRSLLRGRGSSGAEGCGATQQAQTCLRSKKALCASQ
THHPRANSLNTTPLRDFPAVTRGRQLTSTCYRAFASWRTRSLLEPATILPTTCCPAPAAM
CRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVLG
WRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEEF
ICSEAPKEVNIDHETHELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDLA
AQASAASATLSSCSLDEPSHT

>gi568815597r:182546738_182771731|GENSCAN_predicted_CDS_3|2046_bp
atgggcacgtgtggtgtgagtgcctctgatgatggtgctgatagtgacaatgttggccct
gggtgccaggaggaggtggctgactctatcactcagggcctcaccgaaccatgcccagct
ggggcccgcaccagccacaccttcccagctgcgctgcccaccgccaggcagattggagct
gaatttaagaaaataggctgtctcatggggaccagagactgtgaggacgtgaaccaggac
caggtcttctgtgggaacaaagggtttgaagcactgagaatgggaccctcaggagaggaa
gactgcctcctgtgtgaactgcacggttcttgtctgtatgcctcttgcaaagttgtggcc
ttgcaagcaggacctgccttagctgaagccctcccattgactgatggggtggctgcattc
cgtgccttcttgaagacggagttcagtgaggagaacctggaattctggttggcctgtgag
gagttcaagaagaccaggtcaactgcaaaactggtctctaaggcccataggatctttgag
gagtttgtggatgtgcaggctccacgggaggtaaacattgacttccagacccgagaagcc
acgaggaagaacctgcaggagccatccctgacttgctttgaccaagcccaaggaaaaaaa
tctgagctcctggagaagctggaggcctggtgggaaatggtggctaaaagacatgctgca
aagcccgctggaaattggactagccaattatccgcccaagctgttcgtttccaggcagcg
ggtgactctgtggagagacttgtttcagccaagaggacacatcctcatgcagaggggcag
catctgggcctgctctgcagccatggagacaaacttgctctgtcaagggagcagctgctg
gccacctgctcaccagtccaggctaagcccttttctgagcaggagtgtaggagcctgatc
cctagaatacagggctggagcctgagagggccagtggggccgccgctgcttcctggaaga
gcttcgccttccggagccgcaggccgcggagctcacaagagcttcggagcagggcatctc
gcgcggacagggctggcgatgggcagccgaccaaaacgccgcgttcctggtgactgcttt
tccctggcaggcacgcgttcgctgctccgcggccgcggctcttccggggccgagggctgc
ggcgcgacccagcaggctcagacttgcctgcgatcaaagaaagccctgtgtgcctcccag
acccaccacccccgtgcaaactctctcaacacgacaccgctgcgtgactttcctgctgtt
actagaggtcggcagttgactagcacctgctaccgcgcctttgcttcctggcgcacgcgg
agcctcctggagcctgccaccatcctgcctactacgtgctgccctgcgcccgcagccatg
tgccgcaccctggccgccttccccaccacctgcctggagagagccaaagagttcaagaca
cgtctggggatctttcttcacaaatcagagctgggctgcgatactgggagtactggcaag
ttcgagtggggcagtaaacacagcaaagagaatagaaacttctcagaagatgtgctgggg
tggagagagtcgttcgacctgctgctgagcagtaaaaatggagtggctgccttccacgct
ttcctgaagacagagttcagtgaggagaacctggagttctggctggcctgtgaggagttc
aagaagatccgatcagctaccaagctggcctccagggcacaccagatctttgaggagttc
atttgcagtgaggcccctaaagaggtcaacattgaccatgagacccacgagctgacgagg
atgaacctgcagactgccacagccacatgctttgatgcggctcaggggaagacacgtacc
ctgatggagaaggactcctacccacgcttcctgaagtcgcctgcttaccgggacctggct
gcccaagcctcagccgcctctgccactctgtccagctgcagcctggacgagccctcacac
acctga

>gi568815597r:182546738_182771731|GENSCAN_predicted_peptide_4|139_aa
MERKPPLAPAVSLKEMDEDQKIEKQKATEIAHSHTASPATTDLHLSPRETELKQNPKRNR
IDSAVGAVDNQHLQLEGEIPKMLSNLDGTMVFSEALETLHKAVAARPPPGIALPEAARQM
PAVEPQVDISGMVGAMILQ

>gi568815597r:182546738_182771731|GENSCAN_predicted_CDS_4|420_bp
atggaaaggaagcccccgctggcccctgcagtgtccttgaaggagatggatgaagatcag
aaaattgagaaacagaaagctacagaaattgcccatagtcatactgctagtcctgcaacc
acagacttacatctgagtcctagagagacagaactaaagcagaacccaaaaagaaacaga
attgattcagcagttggagcagtagacaaccaacatctgcaactggaaggggaaatccca
aagatgttgtcaaatttggacggcaccatggtattttcagaggcattagaaacactccac
aaggcagtggcagcaagacctccacctggcatcgcacttcctgaagcagccaggcagatg
ccagcagtggagcctcaagtggacatctctggcatggtgggagccatgatactgcagtga

>gi568815597r:182546738_182771731|GENSCAN_predicted_peptide_5|77_aa
MDNVNEIQEQKLHGAEKEEEKVEEDIAGIWDMSQLPEEISQWLVTVNLQSEKGFGKKVIQ
GDTENSKFIEGQGNIPL

>gi568815597r:182546738_182771731|GENSCAN_predicted_CDS_5|234_bp
atggataatgtcaatgaaatccaagagcagaaacttcatggagctgaaaaggaggaagaa
aaagtagaggaagacattgctgggatatgggacatgtcgcagctcccagaagagatctcc
cagtggctagtcacggtcaatctgcaatcagagaagggttttggcaagaaagtgatccaa
ggagacactgaaaatagcaagttcattgaaggccaagggaacatccccttgtga