GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:52:13

Sequence gi568815593r:100711850_101002955 : 291106 bp : 35.41% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    312    307    6                               1.05
 1.07 Term -  40754  40714   41  0  2  110   48    48 0.051  -0.63
 1.06 Intr -  63796  63569  228  2  0   56   82   107 0.098   3.82
 1.05 Intr -  68363  68272   92  1  2   97   73    73 0.151   5.42
 1.04 Intr -  78551  78425  127  0  1   78  100    66 0.142   5.62
 1.03 Intr -  82803  82715   89  2  2   75   75    92 0.347   5.30
 1.02 Intr -  83234  83087  148  0  1   95   53    42 0.376  -0.23
 1.01 Init -  83936  83864   73  2  1   65  100    58 0.235   5.98
 1.00 Prom -  91462  91423   40                              -4.05

 2.05 PlyA -  92179  92174    6                               1.05
 2.04 Term - 100280  99998  283  1  1  102   42   134 0.321   4.11
 2.03 Intr - 144547 144254  294  0  0  111  110   271 0.449  26.80
 2.02 Intr - 174751 174494  258  0  0   66  105   130 0.489   8.16
 2.01 Init - 183980 183805  176  2  2   42  113    72 0.554   3.97
 2.00 Prom - 186746 186707   40                              -3.45

 3.00 Prom + 186792 186831   40                              -7.05
 3.01 Init + 188266 188552  287  0  2   29   10   151 0.559  -2.00
 3.02 Term + 188610 188865  256  0  1   43   48   296 0.882  15.17
 3.03 PlyA + 188973 188978    6                               1.05

 4.04 PlyA - 189736 189731    6                              -0.45
 4.03 Term - 191487 191241  247  2  1   80   42   299 0.937  18.78
 4.02 Intr - 201792 201743   50  0  2   69   64    47 0.047  -3.04
 4.01 Init - 206201 205752  450  2  0   41   86   173 0.346   8.36
 4.00 Prom - 212080 212041   40                              -6.65

 5.02 PlyA - 212112 212107    6                               1.05
 5.01 Sngl - 213055 212711  345  1  0   78   47   219 0.991  12.59
 5.00 Prom - 213832 213793   40                              -8.55

 6.04 PlyA - 214737 214732    6                               1.05
 6.03 Term - 220271 219145 1127  0  2   48   48   277 0.759  10.87
 6.02 Intr - 220519 220422   98  0  2   26   40    94 0.528  -2.87
 6.01 Init - 221456 220834  623  2  2   19   87   168 0.328   4.66
 6.00 Prom - 235006 234967   40                              -3.25

 7.00 Prom + 237895 237934   40                              -4.55
 7.01 Init + 238669 238681   13  0  1   69  111    -6 0.487   0.38
 7.02 Intr + 239120 239261  142  0  1   62   54   107 0.382   3.19
 7.03 Intr + 239402 239517  116  2  2   77   83    51 0.417   2.67
 7.04 Intr + 254882 254969   88  0  1   84   63    55 0.083   0.71
 7.05 Intr + 256878 256963   86  0  2   34  106    72 0.285   2.14
 7.06 Intr + 264783 264825   43  1  1  110   62    29 0.016  -1.12
 7.07 Intr + 270757 270839   83  1  2   58   84    93 0.132   4.26
 7.08 Term + 271246 271382  137  2  2   84   43    80 0.356   0.30
 7.09 PlyA + 272490 272495    6                               1.05

 8.04 PlyA - 272505 272500    6                               1.05
 8.03 Term - 275875 275662  214  0  1   57   47   184 0.745   6.92
 8.02 Intr - 276241 276141  101  1  2   71   43    69 0.716  -1.31
 8.01 Init - 281176 281081   96  1  0   67  103   110 0.917  10.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:100711850_101002955|GENSCAN_predicted_peptide_1|265_aa
MVRESQRMAFLDFVVSFREEVQGEGCTQLALSAWIPHLPRASQVQSGKGWVNECKVWPLR
TARHTGCGRAGSSSSFSPTIQWVPNPYPVSRKNEVCGHLQDEQANLPELFCPFLSGKADR
HNLGQWNLKGGMLTSLSLLSVPFEMKYSGIETGCKRADPFFVTEIEQFLNMTRVAQWTSP
TGSMGLSPCATMRECRNKDTRQRDKRKDSWAWGTTTTNARRPVVAPNVWLRCYLLDTKQK
GQGKECESSPMIGSSGTCILTVADC

>gi568815593r:100711850_101002955|GENSCAN_predicted_CDS_1|798_bp
atggtaagagaaagtcagagaatggccttcctggattttgtggtcagcttcagggaagaa
gttcaaggggaaggctgcactcagcttgcactatcagcctggatcccacacctgccaagg
gctagccaggtgcagagtggcaagggatgggtgaacgaatgcaaggtctggccactgcgc
acagccaggcacactggctgtggcagggcaggcagctccagctctttcagtcccaccatt
cagtgggtcccgaatccttatcctgtgtccaggaagaatgaagtatgtggacacctgcag
gatgagcaagccaatctccccgaacttttctgtcctttcctctccggaaaagctgacagg
cacaaccttggacaatggaaccttaaaggaggcatgctgacttcattgtctcttttaagt
gtcccttttgaaatgaaatattctgggatagagactggctgtaagcgtgcagatcccttt
ttcgtcacagaaattgagcaatttctcaacatgaccagagtggcgcaatggaccagccct
acagggtccatgggtctctccccgtgtgcgacgatgagagagtgtagaaataaagacaca
agacaaagagataaaagaaaagacagctgggcctgggggaccactaccaccaacgcgcgg
agaccagtagtggccccgaatgtctggctgcgctgttatttattggatacaaagcaaaag
gggcagggtaaagagtgtgagtcatctccaatgataggttcatcaggaacctgtatctta
actgttgctgactgttag

>gi568815593r:100711850_101002955|GENSCAN_predicted_peptide_2|336_aa
MFLTFTKLAILFCFRDGELSLSRSLVNSSDKIIRKAGSSIFQHNVEGWKINSSLVLEIRK
NILRFLDAERDVSVVKSSFKPGDVIHYVLDRRRTLNISHDLHSLLPEVSPMKNRRFKTCA
VVGNSGILLDSECGKEIDSHNFVIRCNLAPVVEFAADVGTKSDFITMNPSVVQRAFGGFR
NESDREKFVHRLSMLNDSVLWIPAFMVKGGEKHVEWVNALILKNKLKVRTAYPSLRLIHA
VRGYWLTNKVPIKRPSTGLLMYTLATRFCDEIHLYGFWPFPKDLNGKAVKYHYYDDLKYR
YFSNASPHRMPLEFKTLNVLHNRGALKLTTGKCVKQ

>gi568815593r:100711850_101002955|GENSCAN_predicted_CDS_2|1011_bp
atgtttcttactttcacaaagctggcaattttgttttgtttcagagatggtgaattgtct
ttgagtcggtcacttgtcaatagctctgataaaatcattcgaaaggctggctcttcaatc
ttccagcacaatgtagaaggttggaaaatcaattcctctttggtcctagagataaggaag
aacatacttcgtttcttagatgcagaacgagatgtgtcagtggtcaagagcagttttaag
cctggtgatgtcatacactatgtgcttgacaggcgccggacactaaacatttctcatgat
ctacatagcctcctacctgaagtttcaccaatgaagaatcgcaggtttaagacctgtgca
gttgttggaaattctggcattctgttagacagtgaatgtggaaaggagattgacagtcac
aattttgtaataaggtgtaatctagctcctgtggtggagtttgctgcagatgtgggaact
aaatcagattttattaccatgaatccatcagttgtacaaagagcatttggaggctttcga
aatgagagtgacagagaaaaatttgtgcatagactttccatgctgaatgacagtgtcctt
tggattcctgctttcatggtcaaaggaggagagaagcacgtggagtgggttaatgcatta
atccttaagaataaactgaaagtgcgaactgcctatccgtcattgagacttattcatgct
gtcagaggttactggctgaccaacaaagttcctatcaaaagacccagcacaggtcttctc
atgtatacacttgccacaagattctgtgatgaaattcacctgtatggattctggcccttc
cctaaggatttaaatggaaaagcggtcaaatatcattattatgatgacttaaaatatagg
tacttttccaatgcaagccctcacagaatgccattagaattcaaaacattaaatgtgcta
cataatagaggagctctaaaactgacaacaggaaagtgtgtaaagcaataa

>gi568815593r:100711850_101002955|GENSCAN_predicted_peptide_3|180_aa
MGPPFAGGKGRRDKGTALYCKIGSRKAKYESGVVMQDSRTMEGPSLKLLPSHKARSAPQR
PETALVTSLEYWTGIWSRTSIPVYSKLKTGLSTWLGSAVWELKRNNELGSQAFPRTFHPG
EKGKCSGSLAALALFLAAPTPCTVLVSQETKAVRTLQGTGVSATFAASPLPCPTVIAGFD

>gi568815593r:100711850_101002955|GENSCAN_predicted_CDS_3|543_bp
atgggacccccatttgcgggggggaagggtcgaagggataaaggaactgccttgtattgc
aaaattggtagcagaaaagctaaatatgaatctggggtagtgatgcaagattcaaggact
atggaaggcccttctttgaaactgctgccaagccacaaggctcgcagtgccccccaaagg
ccagagactgccttggttacctcacttgaatactggaccgggatctggagccgaacctcc
attccagtttactcaaaactcaaaactggcctctccacgtggcttggaagcgctgtttgg
gagttgaaacgaaataatgagctcgggtcacaagcttttccacgaacctttcatcctgga
gaaaaaggaaagtgctcagggagcctagctgccctcgcattgttcctggcagctccaact
ccttgcacagtcttggtctctcaggagaccaaggcagtcaggacgctacagggcacgggt
gtaagcgcgacgttcgcggccagccctctgccttgccccactgtaattgcgggttttgat
taa

>gi568815593r:100711850_101002955|GENSCAN_predicted_peptide_4|248_aa
MLEVLARAIRQEKEIRGIPLGKEEAKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSG
HKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTREVKDLFKENYKPLLN
KIKEDRSKWKNIPCSWIGRINMVKMAILPKKIKSRTAHVIHTHYRSYLVIGFAQRLSPSK
REGPVTPPNPAAEAAATSNAQGVSSEKKPEPQGGGAERPWQSWRKQGERSLGSVRGPEGA
RPQKTPVI

>gi568815593r:100711850_101002955|GENSCAN_predicted_CDS_4|747_bp
atgttggaagttctggccagggcaatcaggcaggagaaagaaataaggggtattccatta
ggaaaagaggaagccaaattgtccctgtttgcagatgacatgattgtatatttagaaaac
cccatcgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcagga
cacaaaatcaatgtgcaaaaatcacaagcattcctatacaccaataacagacaaacagag
agccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctagga
atccaacttacaagggaggtgaaggacctcttcaaggagaactacaaaccactgctcaat
aaaataaaagaggacagaagcaaatggaagaacatcccatgctcatggataggaagaatc
aatatggtgaaaatggccatactgcccaagaaaataaagtcacgcacagctcatgtaatc
catactcattatcgttcttacctggtgattggctttgcgcagcgtttatctcctagcaag
agggaagggccagtgacgcccccgaacccagctgcagaagctgccgccacctccaatgca
caaggtgtctcatctgaaaagaaacctgagccccagggaggcggcgcggagcgaccctgg
cagagctggcgcaaacagggcgagaggtcgctgggcagcgttcgaggaccagagggagct
cggccacagaagaccccagtgatctga

>gi568815593r:100711850_101002955|GENSCAN_predicted_peptide_5|114_aa
MDPNQEEIPDLPEKEFRLVIKLIKEVPEKDEVQCKEIEKKMIEEMRGEIFSEIDSINRKQ
SQLQEIKDTLREMQNVLESLSIRIEQAGERTSELEGKVFEVTQSKDKEKRIRKK

>gi568815593r:100711850_101002955|GENSCAN_predicted_CDS_5|345_bp
atggatccaaaccaagaagaaatccctgatttacctgaaaaagaattcaggttagttatt
aagctaatcaaggaggtaccagagaaagatgaagttcaatgtaaggaaattgaaaaaaaa
atgatagaagaaatgaggggagaaatcttcagtgaaatagatagcataaacagaaaacaa
tcacaacttcaggaaataaaggacacacttagagaaatgcaaaatgttctagaaagtctc
agcattagaattgaacaagcaggagaaagaacttcagagcttgaaggcaaggtttttgaa
gtaacccaatccaaagacaaagaaaaaagaataagaaaaaaatga

>gi568815593r:100711850_101002955|GENSCAN_predicted_peptide_6|615_aa
MRTKKDTTYQNLWDAFKAVCRGKFIGLNAHKRKQEKSKVDTLTSQLKELEKQEQTQSKAS
RRQEITKIRAELKEIETQKTLQQINETGSRFFEKINRIDRPLGRLIKMKRERNQIDTIKN
DKGDITTVPIDIQTTIREYYKHIYANKLENLEEMDKFLDTCTLPRLSQEEIESLNRPITG
SKIEAIINSLPTKKSPGPDGFTAEFYHRTKDKNHMIISIDAEKAFDKFQQPFMLKTLNKL
VLGVLAKAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISSFSKVSE
YKINVQKSQAFLYTNNRHTESQIMHELPFTIASKRIKYLGIQLTRVVKDLFNENYKPLLN
EIKEDTKKWKNIPCSWIGRINIMKMATLLKVICRFNTIPIKLPMTFSTELEKTTLKFIWN
QKRAHTAKSILIQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEASEIIPH
IYNHLIFDKLDKNKQWGKDSLFNKWYWENWLSICRKLKLDPFLTPYTKINSRWIKVLSVR
PKTIKTLEENLGNTIQDIGMGKDFMSKTAKAMATKAKIEKWDLIETKESLHGKRNYCQSE
QASYRMGENFCNLPI

>gi568815593r:100711850_101002955|GENSCAN_predicted_CDS_6|1848_bp
atgagaacaaaaaaagacacaacataccagaatctctgggacgcatttaaagcagtgtgt
agagggaaatttataggactaaatgcccacaagagaaagcaggaaaaatctaaagttgac
accctaacatcacaattaaaagaactagagaagcaagagcaaacacagtcaaaagctagc
agaaggcaagaaataactaagatcagagcagaactgaaggagatagaaacacaaaaaacc
cttcaacaaatcaatgaaactgggagcaggttttttgaaaagatcaacagaattgataga
ccgctaggaagactaataaagatgaagagagagaggaatcaaatagacacaataaaaaat
gataaaggggatatcaccactgttcccatagatatacaaactaccatcagagaatactat
aaacacatctatgcaaataaactagaaaatctagaagaaatggataaattcctggacaca
tgcaccctcccaagactaagccaggaagaaattgaatccctgaatagaccaataacaggc
tctaaaattgaggcaataattaatagcctaccaaccaaaaaaagtccaggaccagatgga
ttcacagccgaattctaccacagaacaaaagacaaaaaccacatgattatctcaatagat
gcagaaaaggccttcgacaaatttcaacagcccttcatgctaaaaactctcaataaatta
gtgttaggagttctggccaaggcaatcaggcaggagaaagaaataaagggtattcaatta
ggaaaagaggaagtcaaactgtccctgtttgcagatgacatgattgtatatttagaaaac
cccattgtctcagcccaaaatctccttaagctgataagcagcttcagcaaagtctcagaa
tacaaaatcaatgtgcaaaaatcacaagcattcctatacaccaataacagacacacagag
agccaaatcatgcatgaactcccattcacaattgcttcaaagagaataaaatacctggga
atacaacttacaagggttgtgaaggacctcttcaatgagaattacaaaccactgctcaac
gaaataaaagaggacacaaaaaaatggaagaacattccatgctcatggataggaagaatc
aatatcatgaaaatggccacactgctcaaggtaatttgtagattcaataccatccccatc
aagctaccaatgactttctccacagaattggaaaaaactactttaaagttcatatggaac
caaaaaagagcccacactgccaagtcaatcctaatccaaaagaacaaagctggaggcatc
acgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactgg
taccaaaacagagatatagaccaatggaacagaacagaggcctcagaaataataccacac
atctacaaccatctgatctttgacaaacttgacaaaaacaagcaatggggaaaggattcc
ctatttaataaatggtactgggaaaactggctatccatatgtagaaagctgaaactggat
cccttccttacaccttatacaaaaattaattcaagatggattaaagtcttaagtgtcaga
cctaaaaccataaaaaccctagaagaaaacctaggtaataccattcaggacataggcatg
ggcaaggacttcatgtctaaaacagcaaaagcaatggcaaccaaagccaaaattgagaaa
tgggatctaattgaaactaaagagagtctgcacggcaaaagaaactactgtcagagtgaa
caggcaagctacagaatgggagaaaatttttgcaatctacccatctga

>gi568815593r:100711850_101002955|GENSCAN_predicted_peptide_7|235_aa
MVRAGQNLSETVLHEDGWQLSPLEMPFAEGSWAIKDVMIHPWERSGSNDGLIFLCFLIDT
ATENDPMPFLHKNVCLLVYFAGKMTKGLFKEPKLKPSNMGRRCCPETSAPLEYRESGEDR
EIQATLNVVYVTMSSSPSLAMESSFFPQIIVDKQEVAKNITKSNMLRLLERGPDPDPKRV
FLDLAQERFQGGTRDLEKKETQRQSIEKEKGAQGTGVQHKEDPRRHRPLSSLSIY

>gi568815593r:100711850_101002955|GENSCAN_predicted_CDS_7|708_bp
atggtaagagcaggacaaaatctatcagaaactgtattgcatgaagatggctggcagctg
agtcctttagaaatgccttttgctgaagggagttgggccatcaaagatgtaatgatacat
ccctgggagaggtcagggtccaatgacggtttaatcttcttgtgtttcctcatagatact
gcgactgaaaacgacccaatgcctttcctgcataaaaatgtctgtctcttagtctacttt
gcaggcaaaatgacaaagggattattcaaagaacccaaactgaagcctagtaacatggga
aggagatgctgtccagaaacatcagccccactagaatacagagagtcaggggaagataga
gagatccaagccacacttaatgtcgtctatgtgactatgagttcttccccaagccttgcg
atggagtccagtttctttcctcaaataattgtagacaaacaagaagttgcaaaaaatatc
acaaaaagcaatatgttacggttactggaaaggggtcctgatccagaccccaagagagtg
ttcttggatcttgcacaagaaagatttcagggtggaacgagagacttggaaaagaaagag
acacagagacaaagtatagagaaagaaaaaggggcccaggggactggcgttcagcataag
gaggatccacgccggcaccgtcctctgagttcccttagtatttattga

>gi568815593r:100711850_101002955|GENSCAN_predicted_peptide_8|136_aa
MAEKERKEGASEQGVWLGTEIEKIGCWMTVLQIASRLFFIKYKNPAQFMTRLAATLRRFT
ALDPKRSLLHMLEICHWAKECPQHGIPPKPRPICVGPHRKSDCSSHLAATPRAPGTLAQG
SLTDSFPDLLGLAAED

>gi568815593r:100711850_101002955|GENSCAN_predicted_CDS_8|411_bp
atggctgagaaggagagaaaagaaggagcatctgaacaaggagtttggctggggacagaa
atagagaagattggctgttggatgaccgtacttcagatagcgtctaggctctttttcatc
aaatataaaaatccagcccagttcatgactcgtttggcagcaaccctgagacgctttaca
gccctagaccctaaaaggagcttgctacacatgctggaaatctgccactgggccaaggaa
tgcccacagcacggtattcctcctaagccacgtcccatctgtgtgggaccccaccgaaaa
tcggactgttcatctcacctggcagccactcccagagcccctggaactctggcccaaggc
tctctgactgactccttcccagatcttctcggcttagcggctgaagactga