GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:45:50

Sequence gi568815587f:17636003_17872627 : 236625 bp : 47.14% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   2449   2612  164  2  2  140   55   140 0.611  14.00
 1.02 PlyA +   3058   3063    6                               1.05

 2.02 PlyA -   3551   3546    6                              -1.95
 2.01 Sngl -   4105   3650  456  1  0   74   38   564 0.999  46.19
 2.00 Prom -   4410   4371   40                              -8.56

 3.00 Prom +   4518   4557   40                             -13.43
 3.01 Init +   4773   4818   46  2  1   38   89    74 0.840   3.34
 3.02 Intr +   4911   5089  179  1  2   60   54   261 0.840  19.54
 3.03 Intr +   5845   5949  105  0  0   63   99   122 0.998  11.21
 3.04 Intr +   6125   6244  120  1  0  103   86    64 0.901   8.39
 3.05 Intr +   7459   7504   46  0  1  105   76   -32 0.611  -4.72
 3.06 Intr +   9562   9641   80  2  2  117   38   190 0.653  16.17
 3.07 Term +   9742   9942  201  0  0   98   54   266 0.973  21.59
 3.08 PlyA +  11259  11264    6                               1.05

 4.07 PlyA -  11978  11973    6                               1.05
 4.06 Term -  44410  44223  188  2  2   88   32    92 0.726   1.25
 4.05 Intr -  52897  52745  153  2  0  110   38    68 0.123   4.04
 4.04 Intr -  63859  63713  147  2  0   79   68    82 0.699   5.51
 4.03 Intr -  68000  67924   77  1  2   72   90   112 0.387   8.96
 4.02 Intr -  72421  72324   98  1  2   94   11    26 0.143  -5.69
 4.01 Init -  72570  72460  111  0  0  109  106    14 0.665   5.52
 4.00 Prom -  76098  76059   40                              -5.86

 5.00 Prom +  78536  78575   40                              -6.56
 5.01 Init +  83781  84410  630  2  0   56   91  1283 0.347 120.75
 5.02 Intr +  84900  84978   79  2  1  117   64   163 0.990  15.92
 5.03 Intr +  85253  85497  245  0  2   63   47   215 0.671  12.12
 5.04 Term +  86075  86365  291  1  0   53   40   187 0.211   5.74
 5.05 PlyA +  88192  88197    6                               1.05

 6.00 Prom +  91320  91359   40                              -5.76
 6.01 Init + 100001 100570  570  1  0  104  114  1613 0.988 160.59
 6.02 Intr + 135663 136596  934  2  1  125   91  1711 0.996 165.87
 6.03 Intr + 143454 143642  189  1  0   44   75   180 0.285  11.86
 6.04 Term + 149212 149222   11  2  2  125   49    -4 0.167  -2.24
 6.05 PlyA + 150738 150743    6                               1.05

 7.05 PlyA - 152070 152065    6                               1.05
 7.04 Term - 152411 152083  329  0  2  100   44   207 0.714  12.37
 7.03 Intr - 156447 156363   85  0  1   75   55    30 0.011  -2.21
 7.02 Intr - 160293 160233   61  2  1   90   52    59 0.010   1.24
 7.01 Init - 172355 172282   74  2  2   84   48    63 0.024   2.44
 7.00 Prom - 182451 182412   40                              -4.66

 8.00 Prom + 183218 183257   40                              -3.16
 8.01 Init + 196332 196404   73  2  1  100   93    11 0.179   4.09
 8.02 Intr + 216462 216521   60  1  0   66   96    46 0.673   1.91
 8.03 Intr + 217541 217676  136  0  1   90  113    68 0.843   9.13
 8.04 Intr + 230347 230414   68  1  2   45   75    52 0.011  -1.85
 8.05 Term + 231537 231751  215  1  2   89   47    86 0.671   1.99
 8.06 PlyA + 232654 232659    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:17636003_17872627|GENSCAN_predicted_peptide_1|54_aa
XCENFRCPQVQCGLGTALVEVWSPDRCCPYKSCGESVVRTASPLGDPVALLRRD

>gi568815587f:17636003_17872627|GENSCAN_predicted_CDS_1|165_bp
ntgtgtgagaacttccgctgtccccaagtgcagtgtggcctgggcactgccctggtggag
gtgtggagccccgaccgctgctgcccctacaaatcctgtggtgagtccgtggtcaggaca
gcctccccgctgggagatccagtggccctgctgaggagggattga

>gi568815587f:17636003_17872627|GENSCAN_predicted_peptide_2|151_aa
MIVINIIIIIAIIIFTTTIILTFPTTTIVIALSPPSPSSLHYHHHPHCPHHHHHCIITIT
TTTILTITTTIILTITTTITIALSPSPPPSSSPSPPPPSLHYYHNHCTITIVTTTILLTV
PTIITTISIIIIIFMIIFIFIVLNPYHNSKA

>gi568815587f:17636003_17872627|GENSCAN_predicted_CDS_2|456_bp
atgattgtcatcaacatcatcatcatcattgccattatcatcttcaccaccaccatcatc
ctcaccttccccactaccaccattgtcattgcattatcaccaccatcaccatcgtcactg
cattatcaccatcaccctcactgtccccaccaccaccatcattgcattatcaccatcacc
accaccaccatcctcaccatcaccaccaccatcatcctcaccatcaccaccaccatcacc
attgcattatcaccatcaccaccaccatcatcctcaccatccccaccaccaccatcattg
cattattaccataatcactgcactatcaccatcgtcaccaccaccatcctcctcactgtc
cccaccatcatcactaccatcagcatcatcattatcatcttcatgataattttcatcttc
attgtacttaatccttaccacaactctaaagcatga

>gi568815587f:17636003_17872627|GENSCAN_predicted_peptide_3|258_aa
MHSVENVCGCAKYECVKAPVCLSRELGVMQPGQTVVELSADGVCHTSRCTTVLDPLTNFY
QINTTSVLCDIHCEANQEYEHPRDLAACCGSCRNVSCLFTFPNGTTSLFLPGASWIADCA
RHHCSSTPLGAVLVRSPISCPPLNETECAKVGGSVVPSLEGCCRTCKEDGRSCKKVTIRM
TIRKNECRSSTPVNLVSCDGRCPSASIYNYNINTYARFCKCCREVGLQRRSVQLFCATNA
TWVPYTVQEPTDCACQWS

>gi568815587f:17636003_17872627|GENSCAN_predicted_CDS_3|777_bp
atgcacagcgtggagaatgtgtgtggctgcgccaagtacgagtgtgtgaaggccccggtg
tgtctgagccgcgagctgggtgtgatgcagcccggccagacagtggtggagctctcagca
gatggcgtgtgccacacctcccgctgcaccaccgtgctcgaccctctcaccaacttctac
cagatcaacaccacctccgtgctctgtgacatccactgtgaggcgaaccaggagtacgag
cacccgcgggacctcgctgcctgctgcggctcctgcaggaacgtgtcctgtctcttcacc
ttccccaatggcaccacctccctgttcttgcccggggcatcctggatcgcagactgcgcc
cgccaccactgcagcagcacgcccctgggtgccgtgctggtccgctctcccataagctgc
ccaccgctcaatgagactgagtgtgccaaggttgggggttccgtggtaccttccttggaa
ggatgctgcaggacctgtaaggaggatgggcgctcctgcaagaaggtgaccatccgcatg
accatccgcaagaatgaatgcaggagcagcacccctgtgaacctagtgtcctgcgatggg
aggtgcccatccgccagcatctacaactacaacatcaacacctatgcccgattctgcaag
tgctgccgtgaggtgggcctgcagcggcgctctgtgcagctcttctgtgccaccaatgcc
acctgggtgccctatacagtgcaggagcccaccgactgtgcctgccagtggtcctga

>gi568815587f:17636003_17872627|GENSCAN_predicted_peptide_4|257_aa
METGPPVLGLCSSCVSTGLRSLIHLDSNAVSARYLPWLSNVTGSSTYGGCKGSVVKVYTV
LASCLSQGAQTCENITLQGKKDFADVDGKIILDSRGVSEKQDSRKEDKAPNLRTQLEKPE
KAPEQLTLGATYWRQPPPPPHWLCCDVSEKQGSIPTLPFFLGHTCGCYASVIWPSFYLFL
HFQFVDSSESDRKALGEQKPYGLDRRSSSMPLCYGAPPFLVSASIAFKGKKEEGVSGEYL
EELKYSPKEHAFTPKQF

>gi568815587f:17636003_17872627|GENSCAN_predicted_CDS_4|774_bp
atggagactggaccaccagtgctggggctatgttcctcatgtgtctccactggacttagg
agtctaatacacctggattcaaatgctgtgtctgctcgttacttaccttggctgtcaaat
gtgactggttctagcacctacggaggatgtaagggttcagttgtcaaggtatacacagtg
cttgcatcatgcctgtctcagggtgcacaaacctgtgaaaacattacgttacaaggcaaa
aaggactttgcagatgtggatgggaagattatcctggattcccgaggggtcagtgagaag
caggactccaggaaggaagacaaggccccaaacctcaggactcagttggagaaaccagag
aaggccccagaacagctgactctgggcgccacgtattggaggcagccaccccctccccca
cactggctgtgctgtgacgtctctgaaaaacagggcagcatccccacattgcccttcttt
ctgggtcatacctgtggatgctatgccagtgttatttggccatctttctacctcttcctg
cattttcagtttgttgatagttctgagtcagatcggaaagctcttggtgagcagaagcca
tatggcttagaccgcaggtcctcctccatgccattgtgctatggagcacccccttttctt
gtcagtgcctctatagcattcaaggggaagaaagaggaaggagtgagtggggagtacctt
gaagaactgaagtactcaccaaaagagcatgcatttactccaaagcaattttaa

>gi568815587f:17636003_17872627|GENSCAN_predicted_peptide_5|414_aa
MELLSPPLRDVDLTAPDGSLCSFATTDDFYDDPCFDSPDLRFFEDLDPRLMHVGALLKPE
EHSHFPAAVHPAPGAREDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERR
RLSKVNEAFETLKRCTSSNPNQRLPKVEILRNAIRYIEGLQALLRDQDAAPPGAAAAFYA
PGPLPPGRGGEHYSGDSDASSPRSNCSDGMMDYSGPPSGARRRNCYEGAYYNEAPSEPRP
GKSAAVSSLDCLSSIVERISTESPAAPALLLADVPSESPPRRQEAAAPSEGESSGDPTQS
PDAAPQCPAGANPNPIYQAGEPRALAQVIKIKALIYTAVAPAFPGHGCGIRRKIRKLGQL
SLSDACRRQADCKEEACCLGKEGGVQISPVREEVPLTLTTLLHTSVALMEGYTG

>gi568815587f:17636003_17872627|GENSCAN_predicted_CDS_5|1245_bp
atggagctactgtcgccaccgctccgcgacgtagacctgacggcccccgacggctctctc
tgctcctttgccacaacggacgacttctatgacgacccgtgtttcgactccccggacctg
cgcttcttcgaagacctggacccgcgcctgatgcacgtgggcgcgctcctgaaacccgaa
gagcactcgcacttccccgcggcggtgcacccggccccgggcgcacgtgaggacgagcat
gtgcgcgcgcccagcgggcaccaccaggcgggccgctgcctactgtgggcctgcaaggcg
tgcaagcgcaagaccaccaacgccgaccgccgcaaggccgccaccatgcgcgagcggcgc
cgcctgagcaaagtaaatgaggcctttgagacactcaagcgctgcacgtcgagcaatcca
aaccagcggttgcccaaggtggagatcctgcgcaacgccatccgctatatcgagggcctg
caggctctgctgcgcgaccaggacgccgcgccccctggcgccgcagccgccttctatgcg
ccgggcccgctgcccccgggccgcggcggcgagcactacagcggcgactccgacgcgtcc
agcccgcgctccaactgctccgacggcatgatggactacagcggccccccgagcggcgcc
cggcggcggaactgctacgaaggcgcctactacaacgaggcgcccagcgaacccaggccc
gggaagagtgcggcggtgtcgagcctagactgcctgtccagcatcgtggagcgcatctcc
accgagagccctgcggcgcccgccctcctgctggcggacgtgccttctgagtcgcctccg
cgcaggcaagaggctgccgcccccagcgagggagagagcagcggcgaccccacccagtca
ccggacgccgccccgcagtgccctgcgggtgcgaaccccaacccgatataccaggcgggc
gagccgcgggcgctcgctcaggtgatcaaaataaaggcgctaatttataccgccgtggct
ccggctttccctggacatgggtgtgggatccggaggaaaatccgcaaactgggccagctg
tccctcagcgacgcctgtaggcggcaggcggattgcaaggaggaagcctgctgcctgggg
aaggaaggaggggtgcaaatttctccagtacgtgaggaagttcctctgaccttgactaca
ttactacacacgtccgtggctcttatggaagggtacacaggttga

>gi568815587f:17636003_17872627|GENSCAN_predicted_peptide_6|567_aa
MGQGDESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRH
PGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHRDAEEALD
SFGGAPLDNSADDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALF
EDPYSSRYARYVAFASLFFILVSITTFCLETHERFNPIVNKTEIENVRNGTQVRYYREAE
TEAFLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSS
KAAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFA
TMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALC
ALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKKKHIPRPPQLGSPNYCKSVVNSPH
HSTQSDTCPLAQEEILEINRADSKLNGEVAKAALANEDCPHIDQALTPDEGLPFTRSGTR
ERYGPCFLLSTGEYACPPGGGMRKGGI

>gi568815587f:17636003_17872627|GENSCAN_predicted_CDS_6|1704_bp
atgggccaaggggacgagagcgagcgcatcgtgatcaacgtgggcggcacgcgccaccag
acgtaccgctcgaccctgcgcacgctgcccggcacgcggctcgcctggctggcggagccc
gacgcccacagccacttcgactatgacccgcgtgctgacgagttcttcttcgaccgccac
cccggcgtcttcgcgcacatcctgaactactaccgcacgggcaagctgcactgcccagcc
gacgtgtgcgggccgctctacgaggaggagctggccttctggggcatcgacgagaccgac
gtggagccctgctgctggatgacgtaccgccagcaccgcgacgccgaggaggctctggac
agcttcggcggcgctcctctggacaacagcgccgacgacgcggacgccgacggccctggc
gactcgggcgacggcgaggacgagctggagatgaccaagcgcctggcgctcagtgactcc
ccggatggccggcctggcggcttttggcgccgctggcagccgcgcatctgggcgctcttc
gaggacccgtactcgtcccgctacgcgcggtatgtggccttcgcttccctcttcttcatc
ctggtctccatcaccaccttctgcctggagacccacgagcgcttcaaccccatcgtgaac
aagacggagatcgagaacgttcgcaatggcacgcaagtgcgctactaccgggaggccgag
acggaggccttccttacctacatcgagggcgtctgtgtggtctggttcaccttcgagttc
ctcatgcgtgtcatcttctgccccaacaaggtagagttcatcaagaactcgctcaacatc
attgactttgtggccatcctgcccttctacctggaggtggggctgagcggcctgtcctcc
aaggcagccaaggacgtgctgggcttcctgcgcgtcgtccgcttcgtgcgcatcttgcgc
atctttaagctgacccgccactttgtgggcctgcgggtcctgggccacacgctccgagcc
agcaccaacgagttcctgctgctcatcatcttcctggccttgggcgtgctgatcttcgcc
accatgatctactacgccgagaggataggggcacagcccaatgaccccagcgccagtgag
cacacgcactttaagaacatccccatcggcttctggtgggccgtggtcaccatgacgacc
ctgggctatggagacatgtacccgcagacgtggtccggcatgctggtgggggctctgtgt
gcgctggcgggcgtgctcaccatcgccatgcccgtgcccgtcatcgtgaacaatttcggg
atgtattactccttagccatggctaagcagaaactaccaaagaaaaaaaagaagcatatt
ccgcggccaccgcagctgggatctcccaattattgtaaatctgtcgtaaactctccacac
cacagtactcagagtgacacatgtccgctggcccaggaagaaattttagaaattaacaga
gcagattccaaactgaatggggaggtggcgaaggccgcgctggcgaacgaagactgcccc
cacatagaccaggccctcactcccgatgagggcctgccctttacgcgctcgggcacccgc
gagagatacggaccctgcttcctcttatcaaccggggagtacgcgtgcccacctggtgga
ggaatgagaaagggaggaatatga

>gi568815587f:17636003_17872627|GENSCAN_predicted_peptide_7|182_aa
MIGSFLRPSPETDAGTTLPVEPAELPNRTIILIAILMAILCMASWVSSAFLPPPSLLTVS
WCHSPGPGTKPIPGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHS
LALCQLPAHPALVQDPKVTYLSPDAIEDTESQKAMDKERNWKERQSETSTQSQSDWSRNG
GL

>gi568815587f:17636003_17872627|GENSCAN_predicted_CDS_7|549_bp
atgattggaagcttcctgaggccctcaccagaaacagatgctggcaccacgcttcctgta
gagcctgcagaactgcccaataggaccatcatcctcatagccattctcatggccattctc
tgcatggcctcctgggtcagctctgccttcctcccacccccatccctgctgacggtcagc
tggtgccactcaccagggccgggcacaaagcccataccaggtggagtgtgttactcttgg
ggctggaatgagcatggcatgtgcggagatggcactgaagccaacgtctgggccccaaag
ccggtgcaggctctgctgtcatcgtcaggactccttgtgggctgtggggctggccactcc
ttggccctctgccagctgccagctcaccctgcattggtccaggaccccaaggtcacctac
ctttccccagatgccatcgaggacactgaatctcagaaagccatggacaaagagagaaac
tggaaggaaagacaatcagaaacttcaacccaaagccaatctgactggtccagaaatggg
ggactgtga

>gi568815587f:17636003_17872627|GENSCAN_predicted_peptide_8|183_aa
MHITCELLILAFRHDCEASPATWNSSAAAKSATHHPTSPPPFGSGHSAEMDNSIWFFLRE
TEPSHVSTYGVPIEDSTFAIASWNLESLLSIQYSNMLSRFIAQEQQAKPYSLGAQLSVDL
PFWGLEDSGPLLTAPLGSAPVGSLCRGSDPTFPFHTALAEVLHEGPTTVAKFCLGIQEFP
YIF

>gi568815587f:17636003_17872627|GENSCAN_predicted_CDS_8|552_bp
atgcacataacatgtgagttgctcatccttgccttccgccatgattgtgaggcctcccca
gccacgtggaactcttcagcagctgctaaatctgctacacaccaccccacttcaccccct
ccatttggctcaggtcactctgcagaaatggacaactccatctggtttttcctcagggag
acagagccttcccatgtatccacgtatggagttcctattgaggactcaacctttgcaata
gcttcttggaatctggaaagtctactaagtattcagtacagtaacatgctgtccaggttt
atagcccaggagcaacaggctaaaccatatagcctaggtgcacagctgtcagtggatcta
ccattctggggcctggaggatagtggccctcttctcaccgctccactaggcagtgcccca
gtagggagtctgtgtcggggctctgaccccacatttcccttccacactgctctagcagaa
gttctccatgaaggccccaccactgtagcaaaattttgtctgggcatccaggaatttcca
tacatcttctga