Result of FASTA (ccds) for pF1KB3718
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3718, 165 aa
  1>>>pF1KB3718 165 - 165 aa - 165 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2628+/-0.000755; mu= 12.0320+/- 0.045
 mean_var=56.4370+/-11.097, 0's: 0 Z-trim(107.1): 27  B-trim: 0 in 0/47
 Lambda= 0.170723
 statistics sampled from 9335 (9353) to 9335 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.69), E-opt: 0.2 (0.287), width:  16
 Scan time:  1.600

The best scores are:                                      opt bits E(32554)
CCDS13127.1 DSTN gene_id:11034|Hs108|chr20         ( 165) 1109 280.9 2.4e-76
CCDS46580.1 DSTN gene_id:11034|Hs108|chr20         ( 148)  994 252.6 7.3e-68
CCDS8114.1 CFL1 gene_id:1072|Hs108|chr11           ( 166)  780 199.9   6e-52
CCDS9650.1 CFL2 gene_id:1073|Hs108|chr14           ( 166)  755 193.7 4.2e-50
CCDS9649.1 CFL2 gene_id:1073|Hs108|chr14           ( 166)  755 193.7 4.2e-50
CCDS58311.1 CFL2 gene_id:1073|Hs108|chr14          ( 149)  684 176.2 7.1e-45


>>CCDS13127.1 DSTN gene_id:11034|Hs108|chr20              (165 aa)
 initn: 1109 init1: 1109 opt: 1109  Z-score: 1484.2  bits: 280.9 E(32554): 2.4e-76
Smith-Waterman score: 1109; 100.0% identity (100.0% similar) in 165 aa overlap (1-165:1-165)

               10        20        30        40        50        60
pF1KB3 MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
               70        80        90       100       110       120

              130       140       150       160     
pF1KB3 KDAIKKKFQGIKHECQANGPEDLNRACIAEKLGGSLIVAFEGCPV
       :::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KDAIKKKFQGIKHECQANGPEDLNRACIAEKLGGSLIVAFEGCPV
              130       140       150       160     

>>CCDS46580.1 DSTN gene_id:11034|Hs108|chr20              (148 aa)
 initn: 994 init1: 994 opt: 994  Z-score: 1331.8  bits: 252.6 E(32554): 7.3e-68
Smith-Waterman score: 994; 100.0% identity (100.0% similar) in 148 aa overlap (18-165:1-148)

               10        20        30        40        50        60
pF1KB3 MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
                        :::::::::::::::::::::::::::::::::::::::::::
CCDS46                  MKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
                                10        20        30        40   

               70        80        90       100       110       120
pF1KB3 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
            50        60        70        80        90       100   

              130       140       150       160     
pF1KB3 KDAIKKKFQGIKHECQANGPEDLNRACIAEKLGGSLIVAFEGCPV
       :::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KDAIKKKFQGIKHECQANGPEDLNRACIAEKLGGSLIVAFEGCPV
           110       120       130       140        

>>CCDS8114.1 CFL1 gene_id:1072|Hs108|chr11                (166 aa)
 initn: 773 init1: 705 opt: 780  Z-score: 1046.2  bits: 199.9 E(32554): 6e-52
Smith-Waterman score: 780; 71.1% identity (86.7% similar) in 166 aa overlap (1-165:1-166)

               10        20        30        40        50        60
pF1KB3 MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
       ::::: :.: : ..: :::::: :::::.:::::::.:::: ::: ::.:::::::::::
CCDS81 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
       : :. ::.  :: :::.::::::::::..:::::.::.:.:..:::: ::::::::::::
CCDS81 GQTVDDPYATFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASS
               70        80        90       100       110       120

              130       140        150       160     
pF1KB3 KDAIKKKFQGIKHECQANGPEDLNRAC-IAEKLGGSLIVAFEGCPV
       :::::::. ::::: :::  :...  : .::::::: ....:: :.
CCDS81 KDAIKKKLTGIKHELQANCYEEVKDRCTLAEKLGGSAVISLEGKPL
              130       140       150       160      

>>CCDS9650.1 CFL2 gene_id:1073|Hs108|chr14                (166 aa)
 initn: 753 init1: 688 opt: 755  Z-score: 1012.9  bits: 193.7 E(32554): 4.2e-50
Smith-Waterman score: 755; 68.7% identity (87.3% similar) in 166 aa overlap (1-165:1-166)

               10        20        30        40        50        60
pF1KB3 MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
       ::::: : ::: ..: :::::: :: ::::::::::.:::: ::. :::::.:.:::::.
CCDS96 MASGVTVNDEVIKVFNDMKVRKSSTQEEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
       : :. ::.  :: .:: .:::::::::..:::::.::.:.:..:::: ::::::::::::
CCDS96 GDTVEDPYTSFVKLLPLNDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASS
               70        80        90       100       110       120

              130       140        150       160     
pF1KB3 KDAIKKKFQGIKHECQANGPEDL-NRACIAEKLGGSLIVAFEGCPV
       :::::::: ::::: :.:: .:. .:. ..:::::...:..:: :.
CCDS96 KDAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLGGNVVVSLEGKPL
              130       140       150       160      

>>CCDS9649.1 CFL2 gene_id:1073|Hs108|chr14                (166 aa)
 initn: 753 init1: 688 opt: 755  Z-score: 1012.9  bits: 193.7 E(32554): 4.2e-50
Smith-Waterman score: 755; 68.7% identity (87.3% similar) in 166 aa overlap (1-165:1-166)

               10        20        30        40        50        60
pF1KB3 MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
       ::::: : ::: ..: :::::: :: ::::::::::.:::: ::. :::::.:.:::::.
CCDS96 MASGVTVNDEVIKVFNDMKVRKSSTQEEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
       : :. ::.  :: .:: .:::::::::..:::::.::.:.:..:::: ::::::::::::
CCDS96 GDTVEDPYTSFVKLLPLNDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASS
               70        80        90       100       110       120

              130       140        150       160     
pF1KB3 KDAIKKKFQGIKHECQANGPEDL-NRACIAEKLGGSLIVAFEGCPV
       :::::::: ::::: :.:: .:. .:. ..:::::...:..:: :.
CCDS96 KDAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLGGNVVVSLEGKPL
              130       140       150       160      

>>CCDS58311.1 CFL2 gene_id:1073|Hs108|chr14               (149 aa)
 initn: 682 init1: 617 opt: 684  Z-score: 919.1  bits: 176.2 E(32554): 7.1e-45
Smith-Waterman score: 684; 69.1% identity (88.6% similar) in 149 aa overlap (18-165:1-149)

               10        20        30        40        50        60
pF1KB3 MASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDV
                        ::::: :: ::::::::::.:::: ::. :::::.:.:::::.
CCDS58                  MKVRKSSTQEEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDI
                                10        20        30        40   

               70        80        90       100       110       120
pF1KB3 GVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASS
       : :. ::.  :: .:: .:::::::::..:::::.::.:.:..:::: ::::::::::::
CCDS58 GDTVEDPYTSFVKLLPLNDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASS
            50        60        70        80        90       100   

              130       140        150       160     
pF1KB3 KDAIKKKFQGIKHECQANGPEDL-NRACIAEKLGGSLIVAFEGCPV
       :::::::: ::::: :.:: .:. .:. ..:::::...:..:: :.
CCDS58 KDAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLGGNVVVSLEGKPL
           110       120       130       140         




165 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 05:20:06 2016 done: Sat Nov  5 05:20:06 2016
 Total Scan time:  1.600 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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