GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:19:27

Sequence gi568815592r:2790166_3000611 : 210446 bp : 44.88% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -   1321   1255   67  0  1   94   85    53 0.029   4.51
 1.04 Intr -   7807   7672  136  2  1   99   72   250 0.955  24.13
 1.03 Intr -   9888   9770  119  2  2   -2   43    92 0.016  -4.19
 1.02 Intr -  12167  12066  102  1  0   89  105    38 0.134   4.89
 1.01 Init -  14844  14705  140  0  2   89    3   105 0.134   1.71
 1.00 Prom -  18459  18420   40                              -3.56

 2.00 Prom +  19398  19437   40                              -6.36
 2.01 Init +  20982  21048   67  2  1   67   98    89 0.466   9.03
 2.02 Term +  29184  29278   95  1  2  108   53    59 0.330   2.39
 2.03 PlyA +  29786  29791    6                               1.05

 3.09 PlyA -  30311  30306    6                               1.05
 3.08 Term -  33159  33083   77  1  2   49   37    81 0.127  -2.90
 3.07 Intr -  43847  43481  367  2  1   74   69   149 0.787   6.32
 3.06 Intr -  45858  45691  168  0  0   36   86   347 0.991  29.44
 3.05 Intr -  46085  45943  143  0  2   74  100   100 0.999   9.87
 3.04 Intr -  47834  47717  118  2  1   75  100    67 0.880   6.64
 3.03 Intr -  50429  50254  176  0  2   79   82   195 0.524  17.66
 3.02 Intr -  51818  51647  172  2  1   62   90    25 0.547  -0.38
 3.01 Init -  58310  58221   90  2  0   78   49    78 0.315   3.39
 3.00 Prom -  64677  64638   40                              -6.66

 4.26 PlyA -  66269  66264    6                              -0.45
 4.25 Term -  70444  69957  488  2  2   53   55   259 0.147  13.96
 4.24 Intr -  72690  72646   45  1  0   65   98    51 0.122   2.18
 4.23 Intr -  76146  76110   37  0  1  119   49    38 0.020   0.84
 4.22 Intr -  86260  86128  133  0  1   78   72   104 0.004   8.45
 4.21 Intr - 100405 100086  320  1  2   81   23   218 0.027   9.36
 4.20 Intr - 101823 101668  156  0  0   67  107   305 0.997  30.51
 4.19 Intr - 103388 103246  143  0  2   45   75   100 0.985   4.47
 4.18 Intr - 105343 105226  118  1  1   78   77    40 0.984   1.94
 4.17 Intr - 106025 105888  138  2  0   62   89   110 0.796   9.16
 4.16 Intr - 110456 110279  178  1  1  117  115    47 0.988  10.22
 4.15 Intr - 113490 113385  106  1  1   93   47    62 0.373   1.87
 4.14 Intr - 116060 116030   31  2  1  114   80     2 0.021  -0.30
 4.13 Intr - 129279 129135  145  2  1   85   96     3 0.106   1.08
 4.12 Intr - 131030 130920  111  1  0   45   80    66 0.006   0.99
 4.11 Intr - 150322 150137  186  0  0   74   14   181 0.025   8.10
 4.10 Intr - 158534 158137  398  2  2  105   47   531 0.256  44.08
 4.09 Intr - 158904 158749  156  0  0  107   44    74 0.968   5.11
 4.08 Intr - 160670 160610   61  1  1   27   30    90 0.390  -4.16
 4.07 Intr - 161680 161575  106  2  1   94   34    42 0.417  -1.33
 4.06 Intr - 163021 162875  147  2  0   69   63   125 0.830   8.31
 4.05 Intr - 164544 164427  118  0  1   57   62    69 0.974   1.24
 4.04 Intr - 165505 165359  147  1  0   82   89    75 0.993   7.43
 4.03 Intr - 169177 169003  175  0  1   79   92   205 0.941  19.94
 4.02 Intr - 176425 176235  191  1  2   42  106    66 0.006   2.18
 4.01 Init - 183743 183657   87  2  0   57   98    52 0.079   3.75
 4.00 Prom - 190139 190100   40                              -6.36

 5.00 Prom + 193423 193462   40                              -3.06
 5.01 Init + 198506 198544   39  1  0   87   96    34 0.575   4.34
 5.02 Intr + 198883 198985  103  0  1   70   24    74 0.651  -1.05
 5.03 Intr + 199363 199545  183  2  0   94   33    58 0.315   0.66
 5.04 Intr + 209804 209920  117  0  0   63  113   115 0.870  11.94
 5.05 Intr + 210066 210202  137  1  2   41   86    89 0.579   4.29

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  91024  91344  321  0  0   40   45   173 0.845   4.19


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:2790166_3000611|GENSCAN_predicted_peptide_1|188_aa
MVEDLCIIGIDTWAAVAQNVTPPRRHALTATAAQIHSCLPPKLPKPQRCPHAIKKIRIGL
VAAICAGETELRNSVSMRLGWARTQTVTQLHLLMYVLTTQEKGPPEVNAPERVFDTPDFA
ACPGQHGGRGGVGAGEEEEKEEEEEEEEEEEEEEEEEEEEEEICLGLTTNTETQSWPEPG
DLELVEGL

>gi568815592r:2790166_3000611|GENSCAN_predicted_CDS_1|564_bp
atggttgaggacctctgcattataggcatcgacacttgggctgctgtggcacagaacgtc
acaccacctagacggcatgccctcacagcaacagcggcgcagatccactcctgcctacca
cctaagctccccaagccccagaggtgtccccatgcaataaagaaaataagaattggatta
gtagcagccatctgtgcaggggagactgagctccgcaactctgtgtccatgaggcttggc
tgggctcgaacgcagaccgtcacccagctccatttacttatgtatgttctaacaacacag
gaaaaaggacctccagaagtgaatgccccagaacgagtgtttgacactcctgactttgca
gcctgcccagggcagcatggaggaaggggaggagtaggagcaggggaggaggaggagaag
gaggaggaggaggaagaggaggaggaggaggaggaagaggaggaggaggaggaggaggag
gaggagatctgccttgggttaacgacaaatactgaaactcagtcttggcctgaacctggt
gacctggagctggtggaaggcctg

>gi568815592r:2790166_3000611|GENSCAN_predicted_peptide_2|53_aa
MSEDASPPAKDPGAKSTEGILEGLLASKDSTILIPGPQPRAQFPVFRNINTWI

>gi568815592r:2790166_3000611|GENSCAN_predicted_CDS_2|162_bp
atgagcgaggatgcctctccaccagcaaaagatccaggtgcaaagagcactgaaggcatc
ttggagggactccttgccagcaaggactccactatacttattcctggtccccagccacga
gcacagtttccagtattcagaaacattaatacgtggatctga

>gi568815592r:2790166_3000611|GENSCAN_predicted_peptide_3|436_aa
MAPTPLLDVAAYASTSAKTFLAILVNIDFVATSGARTPTQSPGRAAAPPAAAGPGDASAC
YKSSGPRCLLPDLAPSSEPGACLGGLSVFTMEQLSSANTRFALDLFLALSENNPAGNIFI
SPFSISSAMAMVFLGTRGNTAAQLSKEFLVSTQKTYGADLASVDFQHASEDARKTINQWV
KGQTEGKIPELLASGMVDNMTKLVLVNAIYFKGNWKDKFMKEATTNAPFRLNKKDRKTVK
MMYQKKKFAYGYIEDLKCRVLELPYQGEELSMVILLPDDIEDESTGLKKIEEQLTLEKLH
EWTKPENLDFIEVNVSLPRFKLEESYTLNSDLARLGVQDLFNSSKADLSGMSGARDIFIS
KIVHKSFVEVNEEGTEAAAATAGIATFCMLMPEENFTADHPFLFFIRHNSSVLEATKSKI
KVQEDLMSGKGLLTGS

>gi568815592r:2790166_3000611|GENSCAN_predicted_CDS_3|1311_bp
atggcccctacccccttactggatgtggctgcttatgcttctaccagtgctaaaaccttc
ctcgccatattggtgaatattgactttgtggcgacctcgggagctcggactcctacgcag
tcaccgggaagggccgccgccccgcccgcggctgctggcccgggtgacgcttccgcctgc
tataagagcagcggccctcggtgcctccttcctgacctcgcacccagctcggagcccgga
gcgtgcctcggcggcctgtcggttttcaccatggagcagctgagctcagcaaacacccgc
ttcgccttggacctgttcctggcgttgagtgagaacaatccggctggaaacatcttcatc
tctcccttcagcatttcatctgctatggccatggtttttctggggaccagaggtaacacg
gcagcacagctgtccaaggagttcttggtttcgactcagaaaacatatggtgctgacctg
gccagtgtggattttcagcatgcctctgaagatgcaaggaagaccataaaccagtgggtc
aaaggacagacagaaggaaaaattccggaactgttggcttcgggcatggttgataacatg
accaaacttgtgctagtaaatgccatctatttcaagggaaactggaaggataaattcatg
aaagaagccacgacgaatgcaccattcagattgaataagaaagacagaaaaactgtgaaa
atgatgtatcagaagaaaaaatttgcatatggctacatcgaggaccttaagtgccgtgtg
ctggaactgccttaccaaggcgaggagctcagcatggtcatcctgctgccggatgacatt
gaggacgagtccacgggcctgaagaagattgaggaacagttgactttggaaaagttgcat
gagtggactaaacctgagaatctcgatttcattgaagttaatgtcagcttgcccaggttc
aaactggaagagagttacactctcaactccgacctcgcccgcctaggtgtgcaggatctc
tttaacagtagcaaggctgatctgtctggcatgtcaggagccagagatatttttatatca
aaaattgtccacaagtcatttgtggaagtgaatgaagagggaacagaggcggcagctgcc
acagcaggcatcgcaactttctgcatgttgatgcccgaagaaaatttcactgccgaccat
ccattccttttctttattcggcataattcctcagtgctggaggccacaaagtccaagatc
aaggtacaggaagatttgatgtctggcaagggcctgcttactggttcctag

>gi568815592r:2790166_3000611|GENSCAN_predicted_peptide_4|1306_aa
MCDGRTAPTTTSYRVHAVNSVAVEKLCLRHATKITTCTVHRRFTLLQDSNAATDLTGGGA
QAVMFAHLLLTSCCVAQFLTDHRRICWGLLHIKSAIMDVLAEANGTFALNLLKTLGKDNS
KNVFFSPMSMSCALAMVYMGAKGNTAAQMAQILSFNKSGGGGDIHQGFQSLLTEVNKTGT
QYLLRMANRLFGEKSCDFLSSFRDSCQKFYQAEMEELDFISAVEKSRKHINTWVAEKTEG
KIAELLSPGSVDPLTRLVLVNAVYFRGNWDEQFDKENTEERLFKVSKAKRESCFLYGVGQ
NYRSCGFGEMWNPVMLSEFCSEEGRMCYTRDWGPYGVFDCAYCRNEEKPVQMMFKQSTFK
KTYIGEIFTQILVLPYVGKELNMIIMLPDETTDLRTVEKELTYEKFVEWTRLDMMDEEEV
EVSLPRFKLEESYDMESVLRNLGMTDAFELGKADFSGMSQTDLSLSKVVHKSFVEVNEEG
TEAAAATAAIMMMRCARFVPRFCADHPFLFFIQHSKTNGILFCGRFSSPNKVTIFAVSAT
AHKGNADAKCKRTNLITAQKTPTGYHYKLRQPAFILLSGPTHILLIGRTKCKQQDLDSTP
GVSVAVVMVMLVAGTSQVLESWKCGHHGTSWHRDADGIQGLSLEVPLMPTPYCSWKGVLR
QTLREGSWVLHKKELRDFKEVCQMPTDALFLRAEALDAAGSQPTSLGCQVLNPVLKRPWR
RGPCIMETLSNASGTFAIRLLKILCQDNPSHNVFCSPVSISSALAMVLLGAKGNTATQMA
QALSLNTEEDIHRAFQSLLTEVNKAGTQYLLRTANRLFGEKTCQFLSTFKESCLQFYHAE
LKELSFIRAAEESRKHINTWVSKKTEGKIEELLPGSSIDAETRLVLVNAIYFKGKWNEPF
DETYTREMPFKINQEEQRPVQMMYQEATFKLAHVGEVRAQLLELPYARKELSLLVLLPDD
GVELSTVEKSLTFEKLTAWTKPDCMKSTEVEVLLPKFKLQEDYDMESVLRHLGIVDAFQQ
GKADLSAMSAERDLCLSKFVHKSFVEVNEEGTEAAAASSCFVVAECCMESGPRLEKNGPD
PLDSSDERIQREAFESVLAETFFTKEPLRCWCPWRAWGITKSRLISISSGDTFHIGYDWS
IILEDSGAQLASPSGPHTGGAGGAACQSRTVRSHSSALGWSMGLGAVEQGVVLVGEARAV
QEPMEWVGGSGMAGCRSRALPRGKAAKARREIERSAGGLALLRDPVHPPQPLARVLSPPL
PGASRAGCSECAARQAHVHPELQLASKRCTQPRFPLVPLPPHLPAS

>gi568815592r:2790166_3000611|GENSCAN_predicted_CDS_4|3921_bp
atgtgtgatggcaggacagcccccacaaccacaagttatcgggttcatgcggtcaacagt
gtcgcagttgagaaactctgccttaggcatgcaaccaagatcaccacgtgcacagttcac
cgtaggttcactctcctacaagactccaacgctgccactgacctaacaggaggtggagct
caggcggtgatgttcgctcacctgctgctcacctcctgctgcgtggcccagttcctaaca
gaccacagacggatctgctggggactcctgcatataaagtctgccatcatggatgttctc
gcagaagcaaatggcacctttgccttaaaccttttgaaaacgctgggtaaagacaactcg
aagaatgtgtttttctcacccatgagcatgtcctgtgccctggccatggtctacatgggg
gcaaagggaaacaccgctgcacagatggcccagatactttctttcaataaaagtggcggt
ggtggagacatccaccagggcttccagtctcttctcaccgaagtgaacaagactggcacg
cagtacttgcttaggatggccaacaggctctttggggaaaagtcttgtgatttcctctca
tcttttagagattcctgccaaaaattctaccaagcagagatggaggagcttgactttatc
agcgccgtagagaagtccagaaaacacataaacacctgggtagctgaaaagacagaaggt
aaaattgcggagttgctctctccgggctcagtggatccattgacaaggctggttctggtg
aatgctgtctatttcagaggaaactgggatgaacagtttgacaaggagaacaccgaggag
agactgtttaaagtcagcaaggcgaaaagggaaagctgctttctatatggtgtaggccag
aactataggtcttgtgggtttggggagatgtggaatcccgtcatgctttctgagttctgc
agtgaagaaggaagaatgtgctacaccagagactggggaccatacggcgtctttgactgt
gcctattgcaggaatgaggagaaacctgtgcaaatgatgtttaagcaatctacttttaag
aagacctatataggagaaatatttacccaaatcttggtgcttccatatgttggcaaggaa
ctgaatatgatcatcatgcttccggacgagaccactgacttgagaacggtggagaaagaa
ctcacttacgagaagttcgtagaatggacgaggctggacatgatggatgaagaggaggtg
gaagtgtccctcccgcggtttaaactagaggaaagctacgacatggagagtgtcctgcgc
aacctgggcatgactgatgccttcgagctgggcaaggcagacttctctggaatgtcccag
acagacctgtctctgtccaaggtcgtgcacaagtcttttgtggaggtcaatgaggaaggc
acggaggctgcagccgccacagctgccatcatgatgatgcggtgtgccagattcgtcccc
cgcttctgcgccgaccaccccttccttttcttcatccagcacagcaagaccaacgggatt
ctcttctgcggccgcttttcctctccaaataaagtgacaattttcgcagtgagcgctaca
gctcataaaggcaacgcagacgccaaatgcaaacgaacaaaccttatcacagcacagaaa
accccaacgggttaccactacaagctccggcagcctgcttttattcttttatctggcccc
acccacatcctgctgattggtagaaccaagtgcaaacagcaggacctagactcaacccct
ggtgtttcagtagcagtagtgatggtgatgctggtggcaggaacctcccaagtgctggag
tcttggaagtgtgggcaccatggaacttcctggcacagggatgcagatggcatccaaggt
ctgtctctagaagtgccactcatgccaacgccctactgttcttggaaaggggtcctgaga
caaactctaagagaaggttcttgggtcttgcacaagaaagaactcagggactttaaggaa
gtgtgtcaaatgcccacagacgccttgtttcttcgcgcggaggccctggacgccgcaggc
tcccaacctacttctctgggctgtcaggttctgaacccggtcctgaagaggccctggcgc
cgggggccctgcatcatggaaactctttctaatgcaagtggtacttttgccatacgcctt
ttaaagatactgtgtcaagataacccttcgcacaacgtgttctgttctcctgtgagcatc
tcctctgccctggccatggttctcctaggggcaaagggaaacaccgcaacccagatggcc
caggcactgtctttaaacacagaggaagacattcatcgggctttccagtcgcttctcact
gaagtgaacaaggctggcacacagtacctgctgagaacggccaacaggctctttggagag
aaaacttgtcagttcctctcaacgtttaaggaatcctgtcttcaattctaccatgctgag
ctgaaggagctttcctttatcagagctgcagaagagtccaggaaacacatcaacacctgg
gtctcaaaaaagaccgaaggtaaaattgaagagttgttgccgggtagctcaattgatgca
gaaaccaggctggttcttgtcaatgccatctacttcaaaggaaagtggaatgaaccgttt
gacgaaacatacacaagggaaatgccctttaaaataaaccaggaggagcaaaggccagtg
cagatgatgtatcaggaggccacgtttaagctcgcccacgtgggcgaggtgcgcgcgcag
ctgctggagctgccctacgccaggaaggagctgagcctgctggtgctgctgcctgacgac
ggcgtggagctcagcacggtggaaaaaagtctcacttttgagaaactcacagcctggacc
aagccagactgtatgaagagtactgaggttgaagttctccttccaaaatttaaactacaa
gaggattatgacatggaatctgtgcttcggcatttgggaattgttgatgccttccaacag
ggcaaggctgacttgtcggcaatgtcagcggagagagacctgtgtctgtccaagttcgtg
cacaagagttttgtggaggtgaatgaagaaggcaccgaggcagcggcagcgtcgagctgc
tttgtagttgcagagtgctgcatggaatctggccccagactggaaaagaatggcccagat
cctctggactcctcagatgagcggattcagagagaagcttttgagagcgtgctggcggag
acatttttcacaaaagagcccttgcggtgctggtgtccgtggcgtgcctgggggatcacc
aagagccgcctcatcagcataagctcaggggacacctttcacattgggtatgactggagc
atcatccttgaagactcaggagcccagttggcttcacccagtggaccccacactgggggt
gcaggtggagctgcctgccagtcccgcaccgtgcgctcgcattcctcagcccttgggtgg
tcgatgggactgggcgctgtggagcagggggtggtgcttgtcggggaggctcgggccgta
caggagcccatggagtgggtgggaggctcaggcatggcgggctgcaggtcccgagccctg
ccccgcgggaaggcagctaaggcccggcgagaaatcgagcgcagcgccggtgggctggca
ctgctgcgggacccagtacaccctccgcagccgctggcccgggtgctaagtcccccattg
cccggggccagcagggccggctgctccgagtgcgcggcccgccaagcccacgtccacccg
gaactccagctggccagcaagcgctgcacgcagccccggttcccgctcgtgcctctccct
ccacacctccctgcaagctga

>gi568815592r:2790166_3000611|GENSCAN_predicted_peptide_5|193_aa
MAPRSRMNRESDRLRPERLLPGESPPLCNQPAAAEGAWVPSAEPAAHDALAYIKICIYGN
VTGSPGYPKKGCFLLRGEANARNRKGVCQAVQAVFNGYGIGRSEINLACVSECAVQCGRN
LAQLLERSLGRRGSQSCGSYWGVRWSEGSCLALTERAHTQGPGVESSGGICPQPYGAGAG
IIVILQVGISGPK

>gi568815592r:2790166_3000611|GENSCAN_predicted_CDS_5|579_bp
atggcgccgcgctcccggatgaacagagaaagcgacaggctgcgcccggagcgcctgctg
cctggcgagagcccgcccctctgcaaccagcccgctgcagcggagggcgcctgggtgccc
tcggccgagccagcagcccacgacgcccttgcatacattaagatatgtatatatggaaat
gttaccgggagtcccggttatcccaaaaagggttgtttcctgttgcgtggtgaggccaat
gcacgaaaccgaaagggagtgtgtcaagcagtgcaggctgtattcaatggctatggaatt
ggaagatctgaaatcaacttagcttgcgtcagcgagtgcgcggtccagtgcggccggaac
ctggcgcaactcctagagcggtccttggggagacgcgggtcccagtcctgcggctcctac
tggggagtgcgctggtcggaaggatcgtgcttggctctcacggaacgcgcccacacgcag
ggtcccggtgtcgaatcgtctggtggaatctgccctcaaccctatggagcgggtgctggt
atcatagtcatattacaagtaggaatcagcgggcccaag