GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:12:55

Sequence gi568815597f:235235265_235442769 : 207505 bp : 42.40% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 Intr -   5187   5049  139  2  1  103   97   143 0.995  16.25
 1.06 Intr -  11247  11156   92  0  2   78   92    57 0.998   2.97
 1.05 Intr -  17545  17466   80  2  2   49  100   103 0.986   5.95
 1.04 Intr -  20486  20396   91  2  1   34   82   125 0.992   5.15
 1.03 Intr -  25488  25378  111  0  0   98   87   112 0.997  11.76
 1.02 Intr -  45402  45256  147  0  0   60   55   208 0.928  14.21
 1.01 Init -  45856  45809   48  1  0   54   63    45 0.592  -0.38
 1.00 Prom -  46577  46538   40                              -3.75

 2.00 Prom +  53386  53425   40                              -5.65
 2.01 Init +  54840  54852   13  2  1   37  111    20 0.512  -0.32
 2.02 Term +  60877  61073  197  2  2  -43   39   274 0.654   5.99
 2.03 PlyA +  61121  61126    6                               1.05

 3.00 Prom +  79513  79552   40                              -6.45
 3.01 Sngl +  91429  91959  531  0  0   49   48   449 0.558  32.81
 3.02 PlyA +  91977  91982    6                              -4.04

 4.04 PlyA -  92056  92051    6                             -10.56
 4.03 Term -  92902  92299  604  0  1   -9   44   431 0.642  22.00
 4.02 Intr -  94210  93986  225  0  0   68  -10   170 0.422   1.38
 4.01 Init -  97008  96971   38  0  2   86   76    37 0.440   1.83
 4.00 Prom -  97179  97140   40                              -6.85

 5.00 Prom +  98801  98840   40                              -5.35
 5.01 Init + 106768 107479  712  0  1   52   60   441 0.025  32.80
 5.02 Intr + 127156 127258  103  2  1   83   36    71 0.013  -0.29
 5.03 Intr + 132115 132240  126  1  0   84   99    89 0.059   8.47
 5.04 Intr + 144755 144885  131  2  2   83  115   181 0.201  19.72
 5.05 Term + 144960 144973   14  1  2   77   43    17 0.613  -6.51
 5.06 PlyA + 147002 147007    6                               1.05

 6.03 PlyA - 147799 147794    6                               1.05
 6.02 Term - 149378 148753  626  0  2   46   42   283 0.608  13.06
 6.01 Init - 150174 149715  460  0  1   53   20   179 0.567   3.56
 6.00 Prom - 150261 150222   40                              -6.15

 7.03 PlyA - 150430 150425    6                               1.05
 7.02 Term - 151309 150657  653  2  2  -65   43   321 0.288   5.51
 7.01 Init - 151655 151355  301  2  1   88   -8   283 0.298  16.16
 7.00 Prom - 152382 152343   40                              -8.95

 8.00 Prom + 161231 161270   40                              -4.95
 8.01 Init + 164567 164627   61  1  1   61   62    14 0.116  -2.44
 8.02 Intr + 166239 166323   85  1  1   97   93    43 0.251   3.66
 8.03 Intr + 179169 179354  186  0  0   93  115   213 0.978  22.38
 8.04 Term + 182205 182322  118  0  1  -22   39   168 0.411  -2.07
 8.05 PlyA + 183626 183631    6                               1.05

 9.03 PlyA - 184067 184062    6                               1.05
 9.02 Term - 188138 187921  218  0  2   28   47   168 0.517   3.02
 9.01 Init - 190485 190296  190  0  1   27   60   215 0.968  11.82
 9.00 Prom - 193185 193146   40                              -6.85

10.00 Prom + 195781 195820   40                              -6.05
10.01 Init + 197721 197907  187  2  1   85   92   253 0.988  24.67
10.02 Intr + 198795 198947  153  1  0   68   66    92 0.473   4.12
10.03 Intr + 201280 201344   65  2  2  101   71    52 0.382   2.32
10.04 Intr + 202058 202210  153  1  0   75   83   173 0.652  14.85
10.05 Intr + 203505 203687  183  2  0   -3   41   207 0.129   5.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 106768 107508  741  0  0   52   35   477 0.869  34.75


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:235235265_235442769|GENSCAN_predicted_peptide_1|236_aa
MLYRVVLVRSHLDGKLAPSKEGPLAVLRLGTGVLSAILATCPPEAAILGSGRSRLRGEER
RGRNPALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVGAIVEVKNLDGAYQEAV
INKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKK
TNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCVDYISLDKKKALWFPAL

>gi568815597f:235235265_235442769|GENSCAN_predicted_CDS_1|708_bp
atgctgtatagagttgtcctggtgagaagccaccttgatggcaagcttgcaccgagcaag
gaggggcccctggctgttcttcgcctgggcactggtgtgctttcggcgatcctggccacc
tgcccacctgaagctgccatcttgggttctggcaggagccgtttgcgtggcgaggagcgg
agaggcaggaacccagcccttgatgagcctccctatttgacagtgggcactgatgtgagt
gctaaatacagaggagccttttgtgaagccaagatcaagacagcaaaaagacttgtcaaa
gtcaaggtaggagctattgtggaagtgaagaatcttgatggtgcatatcaggaagctgtt
atcaataaactaacagatgcgagttggtacactgtagtttttgatgacggagatgagaag
acactgagacgatcttcactgtgcctgaaaggagagaggcattttgctgaaagtgaaaca
ttagaccagctcccactcaccaaccctgagcattttggcactccagtcataggaaagaaa
acaaatagaggaagaagatctaatcatataccagaggaagagtcttcatcatcctccagt
gatgaagatgaggatgataggaaacagattgatgagctactaggcaaagttgtatgtgta
gattacattagtttggataaaaagaaagcactgtggtttcctgcattg

>gi568815597f:235235265_235442769|GENSCAN_predicted_peptide_2|69_aa
MYTAEQKVNNILVFTVDVKANKYQIKQAKKKLCGTDMANINTLIRPDGKKAHVLPVPDYD
DVANKIGII

>gi568815597f:235235265_235442769|GENSCAN_predicted_CDS_2|210_bp
atgtacacggcagaacagaaagtcaacaacattcttgtgttcactgtggatgtcaaggcc
aacaaataccagatcaaacaggctaagaaaaagctctgtggcactgacatggccaatatc
aacaccctgatcaggcctgatggaaagaaggcccatgttctaccggttcctgactatgat
gacgttgccaacaaaattgggatcatctaa

>gi568815597f:235235265_235442769|GENSCAN_predicted_peptide_3|176_aa
MGESSSVETSYNCLQLHSKARQLTPVSLGKGSVTKSPNTPSSAKLGSPTRRPRRNLLLPE
FDNPRDSFSAGNLTFMMTLGPRYPLKHQVQLHLEGKQKTPSQHHRSPSALAEAEGKKRAT
SEPRRKSRNQAPAPEPSHADSGLPPAPPSPQTQPPTQLGSFPSPLSRPDGVSRLRQ

>gi568815597f:235235265_235442769|GENSCAN_predicted_CDS_3|531_bp
atgggagaatcatcttcagttgagacatcctataactgcctccaactccacagcaaagcc
cgccagctgaccccggtctctctggggaagggctcggtcaccaagtcaccaaacacacct
tcctctgcaaaactcggaagccccacacgacgacctcgtcgaaacctcctacttcctgaa
ttcgataaccccagagattcgttttccgcaggcaatcttaccttcatgatgactctggga
ccaaggtatcctctaaaacaccaggttcagctgcacctggaggggaaacaaaagacaccc
agtcaacaccacaggagcccctctgcactggcggaggcggagggaaagaagcgagcgacg
tccgaaccccgaagaaagagccgcaaccaggcgccagcccccgaaccatcacacgccgac
tcggggctccctccggccccgccatccccgcaaacccaaccacctacacagctcggcagc
ttcccgtccccattgtcgagacccgacggagtttcccgtctacgacaatga

>gi568815597f:235235265_235442769|GENSCAN_predicted_peptide_4|288_aa
MECGMIDNGDSKGSQIPSFSYHRGTLLWGTATAVISHRFVQHLSVSPGAGLRRQRPPQWS
ALNTHEEMKAPSNALDDETRAHNLASKNRVRSEELGRRSGGRLLSFILPPPRPPPGPLPG
GSCRGSIAAVLWRAARLGARTSSPGGIFRRPPPPNQGARAAAKQRYQSPPREEEEPEPLP
QQPLDPPPFFPISPPGLLVLGGRRREGTLDVPGSDLASEEGRDIFWGFRGLLRGFFWESL
GPAKEQRKIAVVVPAAPEFGASASREPPPPAAAVSEPPPGWAAAHSAV

>gi568815597f:235235265_235442769|GENSCAN_predicted_CDS_4|867_bp
atggagtgtggaatgatagacaatggagattccaaaggaagccaaattccctcattctcc
tatcaccgtggaactctcctctggggcactgccactgcggtaatttcacatcgttttgtt
cagcatctgtccgtctcaccaggcgcaggtctacgaaggcagaggccaccccagtggtcg
gcgctcaacacccatgaagaaatgaaagcgccttctaacgcgttagacgatgaaaccagg
gcacacaaccttgcgtctaagaatcgagtccggagtgaggagctcggtcgccgaagcgga
gggagactcttgagcttcatcttgccgccgccacggccaccgcctggacctttgcccgga
gggagctgcagagggtccatcgccgccgtcctctggagggcagcgcgattgggggcccgg
acctccagtccgggggggatttttcgtcgtccccctccccccaaccagggagcccgagcg
gccgccaaacaaaggtaccagtcgccgccgcgggaggaggaggagccggagcctctgcct
cagcagccgctggacccgccgcccttcttccccatctctcccccgggcctgctggttttg
ggggggagaaggagagaggggactctggacgtgccagggtcagatctcgcctccgaggaa
ggtagggatattttctggggctttcgtggtctcctaagggggttcttttgggagtcgctg
ggcccggccaaggagcagaggaagatcgcggtggtggtccctgcggcgcccgaattcggg
gcctcggcctcccgggaacccccaccccccgcagccgctgtgtccgagccgccccctggc
tgggcggccgcacactcagcggtttag

>gi568815597f:235235265_235442769|GENSCAN_predicted_peptide_5|361_aa
MLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKL
FTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLK
PLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNIL
RQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHLRLP
LSTRQIKQELAEEYETTKSPVPPAYSLQLLLSSRTSLRWRRDFLQHFRPEPQASLLGSWL
EGLLLGTPGVSAGRSHILDSGYIIMSDTLTADVIGRRVEVNGEHATVRFAGVVPPVAAVS
V

>gi568815597f:235235265_235442769|GENSCAN_predicted_CDS_5|1086_bp
atgttgcataatgccagtttactcatcgatgatattgaagacaactcaaaactccgacgt
ggctttccagtggcccacagcatctatggaatcccatctgtcatcaattctgccaattac
gtgtatttccttggcttggagaaagtcttaacccttgatcacccagatgcagtgaagctt
tttacccgccagcttttggaactccatcagggacaaggcctagatatttactggagggat
aattacacttgtcccactgaagaagaatataaagctatggtgctgcagaaaacaggtgga
ctgtttggattagcagtaggtctcatgcagttgttctctgattacaaagaagatttaaaa
ccgctacttaatacacttgggctctttttccaaattagggatgattatgctaatctacac
tccaaagaatatagtgaaaacaaaagtttttgtgaagatctgacagagggaaagttctca
tttcctactattcatgctatttggtcaaggcctgaaagcacccaggtgcagaatatcttg
cgccagagaacagaaaacatagatataaaaaaatactgtgtacattatcttgaggatgta
ggttcttttgaatacactcgtaatacccttaaagagcttgaagctaaagcctataaacag
attgatgcacgtggtgggaaccctgagctagtagccttagtaaaacacttaaggttaccc
ctaagcaccagacagatcaaacaggagcttgctgaggagtatgagaccactaagagtcca
gtgcccccagcctacagcctccaactcctcctaagcagccgtacctcactccggtggagg
cgggacttcctacagcacttccggccagagcctcaagcttcgctgctgggcagttggctg
gaggggctgctgctgggaacacctggagtctccgcgggcagatctcatattttggattct
ggatatattataatgagtgacactttgacagcggatgtcattggtcgaagagttgaagtt
aatggagaacatgcaacagtacgttttgctggtgttgtccctcccgtggcagctgtttct
gtgtaa

>gi568815597f:235235265_235442769|GENSCAN_predicted_peptide_6|361_aa
MIMGDFNTPLSTLDRSTRQKVNKDSQELNSALHQADVIDIYRTLHPKSTEYTFFSAPHHT
YSKIDHIVGSKALLSKCKRSDIITNCLSDHSAIKLEFRIKKLTQNRSTTWKLNNLLLNDY
WVHNEMKTEIKMFFETNENKDTTYQNLWDNIQSKIQTTIREYYKHLYANKLENLEEMDKF
LDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEQVPFL
LKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQ
QHIKKLIHHDQVGFIPGMQGWFNICKSINVIQHINRTKDKNHMIISIDAEKAFDKIQQPS
C

>gi568815597f:235235265_235442769|GENSCAN_predicted_CDS_6|1086_bp
atgataatgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaa
gttaacaaggatagccaggaattgaactcagctctgcaccaagcggacgtaatagacatc
tacagaactctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacc
tattccaaaattgaccacatagttggaagtaaagctctcctcagcaaatgtaaaagatca
gacattataacaaactgtctctcagaccacagtgcaatcaaactagaattcaggattaag
aaactcactcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgactac
tgggtacataatgaaatgaagacagaaataaagatgttctttgaaaccaacgagaacaaa
gacacaacataccagaatctctgggacaacattcaaagcaaaatacaaactaccatcaga
gaatactacaaacacctctacgcaaataaactagaaaatctagaagaaatggataaattc
ctcgacacatacaccctcccaagactaaaccaggaagaagttgaatctctgaatagacca
ataacaggctctgaaattgtggcaataatcaatagcttaccaaccaaaaagagtccagga
ccagatggattcacagccgaattctaccagaggtacaaggaggaacaggtaccattcctt
ctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattttatgaggcc
agcatcatcctgataccaaagccaggcagagacacaaccaaaaaagagaattttagacca
atatccttgatgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccag
cagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggc
tggttcaatatatgcaaatcaataaatgtaatccagcatataaacagaaccaaagacaaa
aaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaaccttca
tgctaa

>gi568815597f:235235265_235442769|GENSCAN_predicted_peptide_7|317_aa
MGKKQSRKTGNSKKQSASPPPKEHSSSPATEQSWTENDFDKLREEGFRRSNYSELQEEIQ
TKGKEVKNFEKNLDECITRITNTEKCLKELMELKAKAQELQRVSVMEDEMNEMKREGKFR
EKRIKRNEQSLQEIWDYVKKPNLRLIGVPESDGENGTKLENTLQDIIQENFPNLARQANN
QIQKIQRMPQRYSSRRATPRHIIVRFTKVEMKEKMLRAARDKGKPIRLTADLLAETLQAR
REWEPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTDKQILRDFVTTRPALKELLKEAL
NMERNNWYQPLQNHAKL

>gi568815597f:235235265_235442769|GENSCAN_predicted_CDS_7|954_bp
atggggaaaaaacagagcagaaaaactggaaactctaaaaagcagagcgcctctcctcct
ccaaaggaacacagctcctcaccagcaacggaacaaagctggacagagaatgactttgac
aaattgagagaagaaggcttcagacgatcaaactactccgagctacaggaggaaattcaa
accaaaggcaaagaagttaaaaactttgaaaaaaatttagacgaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaagccaaggctcaagaacta
caaagggtatcagtgatggaagatgaaatgaatgaaatgaagcgagaagggaagtttaga
gaaaaaagaataaaaagaaatgaacaaagcctccaagaaatatgggactatgtgaaaaaa
ccaaatctacgtctgattggtgtacctgaaagtgacggggagaatggaaccaagttggaa
aacactctgcaggatattatccaggagaacttccccaatctagcaaggcaagccaacaat
cagattcagaaaatacagagaatgccacaaagatactcctcgagaagagcaactccaaga
cacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccaga
gacaaagggaagcccatcagactaacagcggatctcttggcagaaactctacaagccaga
agagagtgggagccaatattcaacattcttaaagaaaagaattttcaacccagaatttca
tatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaa
atactgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagcacta
aacatggaaaggaacaactggtaccagccactgcaaaatcatgccaaattgtaa

>gi568815597f:235235265_235442769|GENSCAN_predicted_peptide_8|149_aa
MSSQIVSELNWRTPRWHPLLGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTGGSFIRPN
KVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIGNKPVETIGFDSIMKQQSKYLLNQCGT
GNGIGGVQSDSRVWEVGQCPADTELTGHK

>gi568815597f:235235265_235442769|GENSCAN_predicted_CDS_8|450_bp
atgtccagtcagatagtgtcagaattgaattggcggacacccagatggcatcccctgctt
ggaccctggttaggagtagaatgggacaatcccgagagaggaaagcatgatgggagccac
gaagggactgtgtattttaaatgcaggcacccgacaggaggatcctttattcgtccgaac
aaggtaaattttggaacagactttcttactgcaattaagaaccgctatgtgttagaagat
ggaccagaggaagatagaaaagagcaaattgttacaattggaaataaacctgtggagact
atcggttttgactctattatgaaacagcaaagcaagtatctcttaaatcagtgtggaact
ggaaatggaattggtggcgtccagtctgattccagggtttgggaagttgggcagtgccca
gcagacactgagttgacaggacataagtaa

>gi568815597f:235235265_235442769|GENSCAN_predicted_peptide_9|135_aa
MTGTASACVTRAEGLGGTRNKVTRNKGPGHITKGLAGHFKVCLKRTFQSLLETGDIGGFE
TATELLFLRSVQSTQTTYILKSTTNNSCQYVVAPPTHTVQGAPVKAQAKHLGTDSPPQVM
REEEAHPLPWKYPQI

>gi568815597f:235235265_235442769|GENSCAN_predicted_CDS_9|408_bp
atgaccgggaccgccagcgcctgtgtgactcgagcagaggggcttgggggtactagaaac
aaggtcacaaggaataaggggccaggccacatcacaaagggccttgcaggccacttcaaa
gtctgtttgaaacggacttttcaaagtttgcttgaaacgggagatattggaggctttgaa
acagcgacagagttattgtttctaaggtctgtacagagcacacagaccacctacatcctg
aaatcaaccacgaacaacagctgtcaatatgtggtcgcccctcccacacacaccgttcaa
ggagcccccgtgaaagcacaggccaagcacctgggcacagactctcctccgcaggtcatg
agggaggaggaagctcatcccctcccctggaagtaccctcagatttga

>gi568815597f:235235265_235442769|GENSCAN_predicted_peptide_10|247_aa
MQKDASKFVDLCVLQKCSTSNCIISAKDHTSMRMNVAKASEVTGRFNSQFKTCAICRTVC
RMGLKQSYELSVRHLFAETVTELNSCGGSYEHPGRNSQQRPPEPEPSFSSRCCGCKTSMF
PSLKYLVVNDNQISQWSFFNELEKLPSLRALSCLRNPLTKEDKEAETARLLIIASIGQLK
TLNKCEILPEERRRAELDYRKAFGNEWKQAGGHKDPEKNRLSEEFLTAHPRYQFLCLSTC
VYTGGLQ

>gi568815597f:235235265_235442769|GENSCAN_predicted_CDS_10|741_bp
atgcagaaagacgccagcaagttcgtggatctgtgcgtgctgcagaaatgctccaccagc
aactgcatcatcagtgccaaggaccacacatccatgcggatgaacgtggccaaggccagt
gaggtcacgggcaggtttaacagccagtttaaaacctgtgctatctgcaggactgtttgc
aggatgggcctgaaacagtcttatgaactgtccgtgaggcacttgtttgctgaaacagta
actgagctgaattcttgtggtggttcctatgaacacccgggaagaaacagccagcagagg
ccgcctgagcctgaaccgagtttctcttccaggtgctgcgggtgcaaaacgtccatgttc
ccatccttgaagtacctggtagtaaacgacaatcagatatcacaatggtcgtttttcaat
gagctagagaagttaccaagtctacgggctttgtcctgcctaagaaaccccctgaccaaa
gaggacaaagaagcagagacggcgcgactactcattatcgccagcattggccagctgaag
acgctgaacaaatgtgagattctccccgaggagaggcggagagctgagcttgactaccga
aaagcttttggaaatgagtggaaacaggctggtggacataaggatccggaaaaaaacaga
ctcagcgaagaattcctcacagcccatcccagataccagttcctctgcctgagtacgtgc
gtatacactggtggccttcag