GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:12:22

Sequence gi568815578f:58289460_58544232 : 254773 bp : 44.23% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   5125   5164   40                              -2.26
 1.01 Init +   8252   8380  129  1  0   63   68   102 0.690   5.85
 1.02 Term +  11584  11760  177  0  0   87   47   114 0.876   4.89
 1.03 PlyA +  12592  12597    6                               1.05

 2.00 Prom +  16228  16267   40                              -4.26
 2.01 Init +  20518  20553   36  0  0  102   84    39 0.549   3.86
 2.02 Intr +  21584  21663   80  1  2  112   90    84 0.513   9.35
 2.03 Intr +  50519  50626  108  2  0   67  -10   146 0.000   2.10
 2.04 Intr +  54259  54340   82  1  1   85   91    48 0.001   4.44
 2.05 Intr +  63814  63885   72  0  0   99   63    21 0.317   0.30
 2.06 Intr +  63973  64079  107  0  2   99  115    48 0.608   7.61
 2.07 Intr +  99964 100058   95  1  2   73   99   102 0.056   9.41
 2.08 Intr + 128752 128904  153  2  0  108  119    94 0.953  14.54
 2.09 Intr + 145143 145246  104  1  2   82   86   103 0.891   9.39
 2.10 Intr + 151448 151624  177  1  0   44   85   161 0.608  11.52
 2.11 Term + 154618 154776  159  0  0   95   44    86 0.702   2.84
 2.12 PlyA + 155386 155391    6                               1.05

 3.16 PlyA - 155647 155642    6                               1.05
 3.15 Term - 158569 158313  257  2  2  113   44    67 0.558   0.55
 3.14 Intr - 168967 168886   82  1  1   54   85   104 0.530   5.91
 3.13 Intr - 169293 169161  133  2  1  106   28    70 0.311   3.45
 3.12 Intr - 171128 171079   50  2  2   42   83    65 0.297  -1.12
 3.11 Intr - 172095 171481  615  0  0   71    7   757 0.350  58.45
 3.10 Intr - 178199 177647  553  1  1  108  105   995 0.983  96.06
 3.09 Intr - 181288 181150  139  2  1   80   90    27 0.743   1.62
 3.08 Intr - 182115 182000  116  2  2   56   -1   115 0.410  -0.51
 3.07 Intr - 184839 184717  123  2  0   53   40   131 0.418   4.50
 3.06 Intr - 191711 191611  101  2  2   16   75    66 0.060  -2.99
 3.05 Intr - 192404 192186  219  2  0   -9  109   133 0.066   4.20
 3.04 Intr - 213954 213845  110  1  2   75   81    52 0.534   3.20
 3.03 Intr - 223495 223286  210  2  0   71   64    55 0.137   0.28
 3.02 Intr - 225051 224935  117  1  0   50   45    82 0.290   0.54
 3.01 Init - 225248 225200   49  2  1   73   92    90 0.345   8.01
 3.00 Prom - 226787 226748   40                              -2.26

 4.05 PlyA - 228817 228812    6                               1.05
 4.04 Term - 231856 231834   23  2  2  156   48    16 0.566   2.87
 4.03 Intr - 235244 235148   97  2  1   80   57    59 0.402   1.58
 4.02 Intr - 235648 235398  251  2  2   52  101    63 0.428   1.16
 4.01 Init - 242314 242299   16  1  1   81  106    -4 0.251   1.09
 4.00 Prom - 248615 248576   40                              -2.36


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  43191  43140   52  2  1  124   42    48 0.887   0.70
S.002 Term -  70286  70133  154  1  1   75   54   174 0.965  10.09


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:58289460_58544232|GENSCAN_predicted_peptide_1|101_aa
MYITTHNAMVASTMGHKHRQTGGTQLHLEESEEMADTFPRTQVLPLTTNDFHISSPVLTV
LQNPTRGLSGVLNNATRICVIASHVLSSAIHYVRPQGPKEG

>gi568815578f:58289460_58544232|GENSCAN_predicted_CDS_1|306_bp
atgtacatcaccacccacaatgccatggtggcaagcaccatgggacacaagcacagacaa
acaggagggacacagctccacttggaagagagtgaagagatggcagacaccttccctaga
acacaggtgctaccactcaccactaatgactttcacatctcctctccagtcctaactgtg
ctccagaaccctacaagggggctttctggtgtcctcaacaatgccaccaggatctgtgtc
attgcttctcatgtgctgtccagtgccattcactatgttagaccacagggacccaaagaa
ggataa

>gi568815578f:58289460_58544232|GENSCAN_predicted_peptide_2|390_aa
MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGCYHYGKESNPNAEEEVVLTDV
IGQDFNLSEINRNALASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIV
YDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVRGLPAKGAPPLRNMAKVEQ
VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS
INVSVMLQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVHDVEINKIISTTASKTETPIV
SKSLSSSLDDTEVKKVMEECKRLQGEVQRLREENKQFKEEDGLRMRKTVQSNSPISALAP
TGKEEGLSTRLLALVVLFFIVGVIIGKIAL

>gi568815578f:58289460_58544232|GENSCAN_predicted_CDS_2|1173_bp
atggcgctgagggagctcaaagtgtgtctgctcggggatacaggtgtaggtaaatcgagt
attgtgtggcggtttgtggaagacagttttgatccaaacatcaacccaacaatagggtgt
taccactacggaaaagaatccaatcctaatgctgaggaggaagtggttcttacagatgtg
ataggccaagattttaacctctcagaaatcaacagaaatgcattggcatcttttatgacc
aagactgtccagtaccaaaatgagctacataaattcctaatctgggatacagctggacaa
gaacgatttcgtgccttagcaccaatgtactatcgagggtcggctgcagctataatcgtt
tatgatatcacaaaagaagagacattttcaacattaaagaattgggtgaaagagcttcga
cagcatggcccacctaatattgtagttgccattgcaggaaataaatgtgatcttatcgat
gtaaggggtctccccgccaaaggtgctccgccgctaaggaacatggcgaaggtggagcag
gtcctgagcctcgagccgcagcacgagctcaaattccgaggtcccttcaccgatgttgtc
accaccaacctaaagcttggcaacccgacagaccgaaatgtgtgttttaaggtgaagact
acagcaccacgtaggtactgtgtgaggcccaacagcggaatcatcgatgcaggggcctca
attaatgtatctgtgatgttacagcctttcgattatgatcccaatgagaaaagtaaacac
aagtttatggttcagtctatgtttgctccaactgacacttcagatatggaagcagtacat
gatgtagaaataaataaaattatatccacaactgcatcaaagacagaaacaccaatagtg
tctaagtctctgagttcttctttggatgacaccgaagttaagaaggttatggaagaatgt
aagaggctgcaaggtgaagttcagaggctacgggaggagaacaagcagttcaaggaagaa
gatggactgcggatgaggaagacagtgcagagcaacagccccatttcagcattagcccca
actgggaaggaagaaggccttagcacccggctcttggctctggtggttttgttctttatc
gttggtgtaattattgggaagattgccttgtag

>gi568815578f:58289460_58544232|GENSCAN_predicted_peptide_3|957_aa
MPAAMLPYACVLVLLGVSPGRHLRASRSFLGPAGGSRVTSQYESRCTLCASRGLASNQTD
STAEKPRVPGGLTREGGSLPSIQTQPPERGRVPFSLPLQLPALHRALFSTERFFEKLFSP
LATSPDSLKLKSTVWPISFNQILMDSNFLNSKPQTEIKTNLPWKGRSPTWKKVWAPELAL
VGSFFRKDWVERGRLGDPQLEAEAGAGGVRVRHWLPIAPTKAQEGPLVEAPKNSSATGHS
VRSGHIQNPFYAVMLQAVIIPSPAPPSTSFLISKMGALTEPMSRVVVSIIPVNPLGSAKV
LTRCRCEDSRPSQAHLGVTLEDLELVLQRLLPVSIFQSPSALSPIPPPAHTAPAAGEAGG
SCLRWEPHCQQPLPDRVPSTAILPPRLNGPWISTGCEVRPGPEFLTRAYTFYPSRLFRAH
QFYYEDPFCGEPAHSLLVKGKVRLRRASWVTRGATEADYHLHKVGIVFHSRRALVDVTGR
LNQTRAGRDCARRLPPARAWLPGALYELRSARAQGDCLEALGLTMHELSLVRVQRRLQPQ
PRASPRLVEELYLGDIHTDPAERRHYRPTGYQRPLQSALHHVQPCPACGLIARSDVHHPP
VLPPPLALPLHLGGWWVSSGCEVRPAVLFLTRLFTFHGHSRSWEGYYHHFSDPACRQPTF
TVYAAGRYTRGTPSTRVRGGTELVFEVTRAHVTPMDQVTTAMLNFSEPSSCGGAGAWSMG
TERDVTATNGCLPLGIRLPHVEYELFKMEQDPLGQSLLFIGQRPTDGSSPDTPEKRPTSY
QAPLPGSPVKHLDAAVMFIATPSEVEHFLFNQVSDQMLSPEDVTIRIPKSSPISLVLLSV
HCITVPHTETRERITSIYQIQRPSRGPAESVRGQTAGGRESHERPFNEMPSPAGGSSGLY
TEKVSGVKCYSGVQSDTGKPKTPISSYMYFSNYNEKWAIPLEKELKMTYNIVFWHGF

>gi568815578f:58289460_58544232|GENSCAN_predicted_CDS_3|2874_bp
atgcccgcagccatgctcccctacgcttgcgtcctggtgcttttgggagtctcacctggc
cggcacctgcgcgcctccaggagcttcctggggcctgcgggagggagtcgcgtcacctcg
caatatgagagccgctgcactctctgcgccagtcggggcctggcctcaaatcagacagat
tcaacagcagagaagccaagagtgcccgggggcctgacgagagaggggggcagcctgccc
tcaattcagacacagccaccagaaagggggagggtgccgttcagcctgccactgcagctc
ccagctctacaccgggcactattttccactgaacgcttctttgaaaagctcttttcaccg
ctggctacatcaccagatagtttgaagctgaagtctactgtttggcccatcagctttaac
caaattctgatggactccaatttccttaacagcaaaccacagactgaaattaagaccaac
ttgccatggaaaggaagatctcccacgtggaagaaagtttgggcaccagagctggccttg
gtgggctccttcttccgcaaggactgggtggaacgagggaggctgggtgaccctcagctg
gaggccgaagctggagccggcggggtgagggttcgccactggctcccaatcgccccaacc
aaagctcaagagggcccccttgtggaagctcccaagaacagctcggcaacaggacattca
gtgagatctgggcacattcagaaccccttctacgcagtgatgctacaagctgtcatcatc
ccctcaccggctcctccaagcaccagtttcctcatcagcaaaatgggtgcattgacagaa
cccatgtcacgggtggttgtgtcgattatacctgtcaatcctttgggctctgccaaggta
ctgacacgctgccgctgtgaggactcaaggcccagccaagctcatctaggggtcactcta
gaggacctggagcttgtgctgcagcgcctgcttcccgtgtccatcttccagtcaccttct
gccctgagcccaattcctccccctgcccacactgcaccggcggctggggaggccgggggc
agctgcctgcgctgggaaccccactgccagcagcccttgccagatagagtgcccagcact
gcgatcctgcctccacgccttaatggaccttggatctccacaggctgcgaggtgcgccca
ggaccggagttcctgacccgcgcctacaccttctaccccagccggctctttcgagcccac
cagttctactacgaggaccccttctgcggggaacctgcccactcgctgctcgtcaagggc
aaagtccgcctgcgccgggcctcctgggtcacccggggagccaccgaggccgactaccac
ctgcacaaggtgggcatcgtcttccacagccgccgggccctggtcgacgtcaccgggcgc
ctcaaccagacccgcgccggccgggactgcgcgcggcggctgcctccggcccgggcctgg
ctgcctggggcgctgtacgagctgcggagcgcccgggctcagggggactgcctggaggcg
ctgggcctcaccatgcacgagctcagcctggtccgcgtgcagcgccgcctgcagccgcag
ccccgggcgtcgccccggctggtggaggagctgtacctgggggacatccacaccgacccg
gcggagaggcggcactaccggcccacgggctaccagcgcccgctgcagagcgcactgcac
cacgtgcagccgtgcccagcctgtggcctcattgcccgctccgatgtgcaccacccgccc
gtgctgccgccccctctggccctgcccctgcacctgggcggctggtgggtcagctcgggg
tgcgaggtgcgcccagcagtcctgttcctcacccggctcttcactttccacgggcacagc
cgctcctgggaagggtattaccaccacttctcagacccagcctgccggcagcccaccttc
accgtgtatgccgccggccgctacaccaggggcacgccatccaccagggtccgcggcggc
accgagctggtgtttgaggtcacacgggcccatgtgacccccatggaccaggtcaccacg
gccatgctcaacttctctgagccaagcagctgtgggggtgcgggggcctggtccatgggc
actgagcgggatgtcacagccaccaacggctgcctaccgctgggcatccggctcccgcat
gtggagtacgagcttttcaagatggaacaagaccccctcgggcaaagcctgctcttcatc
ggacaaaggcccaccgatggctcaagtcccgataccccagagaaacgtcccacctcctac
caagcacccctgcccgggtccccagtcaagcacttggatgcggcagtgatgttcatcgct
acaccttcagaagttgagcactttcttttcaatcaagtctcagaccagatgttgtctcct
gaagatgtcaccattcgcatcccaaagagcagccccatttccctggtccttctgtcagtc
cactgcatcacagttcctcacactgagacccgtgaacggatcacctccatctaccagatt
cagcgaccctcgagaggcccagctgagtcagtgagaggccagacagccgggggcagggaa
agccacgagaggcccttcaatgaaatgccatctccagcagggggaagcagtggcctctac
accgagaaggtctcaggagttaaatgttattcaggtgttcaaagtgacactgggaagccc
aagacccctatctcttcatacatgtatttctcaaactacaatgagaaatgggccattcct
ttagagaaggagctgaaaatgacatataacattgtattttggcatggattctga

>gi568815578f:58289460_58544232|GENSCAN_predicted_peptide_4|128_aa
MNYQMGGERLAEIILVDGGSAALEPGLLTHGILPPPSPHHHESALSSTALCQALVLGALP
TSSHLLRTAVQDWFMWYNKCTNIKITYMTNIDIEIHHTLSFSISHAALETQLDPVDLARC
RSGSQEAI

>gi568815578f:58289460_58544232|GENSCAN_predicted_CDS_4|387_bp
atgaattatcaaatgggtggagagaggcttgctgagatcatactggtggatggtggttca
gcagcactggagcctggactcctcacccatggcatcctgcctcctccttcccctcatcac
catgagtcagcattatccagcacggccctgtgccaggctctggtcttgggggctttaccc
acatcatcccatttactcagaacagccgtccaagactggttcatgtggtacaacaaatgt
acaaacatcaaaatcacatacatgacgaatatagatattgaaatccaccatacactctct
ttttcaataagccacgcagccctggagacacagctggaccctgtggatttggcaagatgc
aggagtggctcccaagaggccatttga