GENSCAN 1.0	Date run:  6-Nov-116	Time: 01:26:36

Sequence gi568815589f:112474081_112718913 : 244833 bp : 39.81% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    952    947    6                               1.05
 1.05 Term -  11083  10929  155  2  2   41   55   109 0.363   0.00
 1.04 Intr -  11687  11611   77  1  2   59   82    16 0.447  -3.66
 1.03 Intr -  12681  12310  372  2  0  -20   85   435 0.584  25.65
 1.02 Intr -  13399  13033  367  2  1   95   39   153 0.397   4.38
 1.01 Init -  21922  21901   22  1  1   87   89    33 0.429   1.45
 1.00 Prom -  34821  34782   40                              -5.65

 2.00 Prom +  36836  36875   40                              -3.55
 2.01 Init +  38439  38553  115  2  1   40  103    75 0.317   4.62
 2.02 Term +  46450  46556  107  2  2   49   32   130 0.465   1.09
 2.03 PlyA +  46618  46623    6                               1.05

 3.03 PlyA -  47513  47508    6                               1.05
 3.02 Term -  51918  51830   89  1  2  -50   36   331 0.875  10.94
 3.01 Init -  60619  60583   37  1  1   71   72    24 0.216  -0.67
 3.00 Prom -  69799  69760   40                              -5.45

 4.00 Prom +  77040  77079   40                              -5.25
 4.01 Sngl + 100001 101242 1242  1  0   77   41   797 0.968  69.47
 4.02 PlyA + 102950 102955    6                               1.05

 5.00 Prom + 109416 109455   40                              -4.95
 5.01 Init + 109703 109770   68  1  2   81   88    64 0.033   6.30
 5.02 Intr + 115579 115655   77  1  2   63   80    39 0.011  -1.16
 5.03 Term + 143791 144836 1046  2  2   87   47  1073 0.832  94.40
 5.04 PlyA + 145242 145247    6                               1.05

 6.00 Prom + 161016 161055   40                              -2.55
 6.01 Init + 170238 170259   22  2  1   62  100    -7 0.340  -2.07
 6.02 Intr + 171570 171742  173  1  2   96  116   111 0.753  13.44
 6.03 Term + 180413 180493   81  1  0   38   40   103 0.452  -2.79
 6.04 PlyA + 181884 181889    6                               1.05

 7.00 Prom + 182890 182929   40                              -6.05
 7.01 Sngl + 185087 185989  903  1  0   48   52   984 0.988  86.76
 7.02 PlyA + 188718 188723    6                               1.05

 8.06 PlyA - 189757 189752    6                               1.05
 8.05 Term - 189949 189788  162  1  0   10   38   200 0.276   4.15
 8.04 Intr - 195061 194932  130  0  1   56    3   127 0.046   0.78
 8.03 Intr - 205515 205377  139  1  1   22   61   103 0.057  -0.40
 8.02 Intr - 207578 207443  136  2  1   52   93   151 0.973  11.22
 8.01 Init - 208417 208283  135  1  0   67   92   106 0.945   9.09
 8.00 Prom - 209885 209846   40                              -8.55

 9.05 PlyA - 212259 212254    6                               1.05
 9.04 Term - 213553 213458   96  1  0   86   49    92 0.654   2.09
 9.03 Intr - 215537 215447   91  1  1   34   99    71 0.294   1.88
 9.02 Intr - 220153 220051  103  2  1  130   40    71 0.314   4.81
 9.01 Intr - 243952 243907   46  1  1   52  111   105 0.789   6.26

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 108510 108409  102  1  0   99   94    63 0.843   7.23


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:112474081_112718913|GENSCAN_predicted_peptide_1|330_aa
MASLKFVNPRAGAGAPAPRTAPAAAAETRAAGRRGGPGQADRSRHRGSLRLAPPSPALPT
SGRPGPCPRSGLAPPRGDKRKVQPGHRAAADGEAESTPARPPPTQRGSPPGSRRRRTRPR
PARGLSPTCSRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRRCRSSLLPHTRSHAAAG
ALDREVGAIHPPRARAQSLLPRQVWNPPSPLWSEEVYSTAPYYTSWARGPRCPPELCAPP
LKRKEQTEPTPSVRPYVVPTSWPHLICDRHTPVTCTLGVALFTIAKRLKQPKCSSTDEEM
NENVIYTYNGILFSLKKEGNLITGYNIDEP

>gi568815589f:112474081_112718913|GENSCAN_predicted_CDS_1|993_bp
atggcctcactcaagtttgtcaacccaagagcaggagcgggggcgccagccccacgcact
gcgcctgcagccgccgctgagacccgagctgccgggcggcggggcggcccggggcaggcg
gaccggagccgccaccgggggtctctgcgcctcgcacccccaagcccggcgctgccgacg
agcggccgcccgggtccctgccctcgctccggcctcgctcccccgagaggagacaaaagg
aaggttcagccgggtcaccgcgcggccgctgacggggaagcagagtcgaccccggcgcgg
ccgccccccacacaaaggggctccccgcctgggtcgcggcgtcggcgcactcgtccccgc
cccgcgcgcgggctctcacccacctgcagccggcaccggaaacgcgccgtggtcggcgag
acccacaggaagtgtgtaacgacacctcctacggcacgcaccgagctcgcagtcgttgct
gccccgaggaggtgtagatcgagcctcctgccgcacacacgttcgcacgcggcggccggc
gcgctggaccgagaggttggagcaatccatcctccgcgcgcacgagctcagtccctactg
ccccgacaggtgtggaacccgccgtccccgctatggtccgaggaagtgtacagcactgct
ccctactacacgtcctgggcccgcggtccccgatgccccccggagctctgtgcacctcca
ctgaaacgcaaggagcagacagaacctacaccatccgtgaggccttacgtagtgcccaca
tcttggcctcacctcatctgtgacaggcataccccagtcacttgtacccttggagtagca
ctattcacaatagccaagaggttgaagcagcccaaatgttcatcaacagatgaagagatg
aatgaaaatgtgatatatacatataatggaatattattcagccttaaaaaggaaggaaat
cttatcacaggctacaacatagatgaaccttga

>gi568815589f:112474081_112718913|GENSCAN_predicted_peptide_2|73_aa
MCETPTANFMFNNLRLNALNSDDSVSSIRSGNVTEHVAYRRVAEEAEALIEKEVKKQRNE
QGVETEKSMNFSQ

>gi568815589f:112474081_112718913|GENSCAN_predicted_CDS_2|222_bp
atgtgtgaaacacctacagctaacttcatgtttaataatttaagactgaatgctctcaat
tcagatgactctgtctcatccattcgttcaggaaatgtcactgagcacgtagcatatagg
agagtggcagaagaagcagaagcactgattgaaaaggaagtgaagaaacagagaaatgaa
cagggtgttgaaactgagaaatcaatgaatttttcacagtaa

>gi568815589f:112474081_112718913|GENSCAN_predicted_peptide_3|41_aa
MVVDAIIPVTQEEEEEEEEEEEEEEEEEEEEEEEEEEEERI

>gi568815589f:112474081_112718913|GENSCAN_predicted_CDS_3|126_bp
atggtggtggatgccataatcccagttactcaagaggaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaaga
atataa

>gi568815589f:112474081_112718913|GENSCAN_predicted_peptide_4|413_aa
MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPL
TATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSC
DFSYCSEPSELDETVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGVVPS
SLHSSSQTQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQT
HAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTH
GTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPS
VNTEPEVSSSQQQPPVAPAITTEATAQCIPGMAHEATVSPSSTHARILRRQHF

>gi568815589f:112474081_112718913|GENSCAN_predicted_CDS_4|1242_bp
atggaggattgtcttcatacctcatctgagaatctgtccaaattggtcagctgggcccat
agccatgggactatttgcagcctcattccaaacctgaaacacttgctttctgaaggttcc
catgggaacctgacagcaatgtggggctgtagtgctggccatgcttatcactggccacta
acagctacttgcagagctgggtcccaagagagggtctgtttccaggataacagaagtttt
aactctgatagtcccagtataatcggggtgccctctgagacacagactagccctgttgaa
aggtaccctgggagaccagtgaaagcaaagctagactgtaaccggaccagagactcttgt
gacttctcctactgtagtgagccctctgaactggatgaaactgttgaagaatatgaagat
gagaacaccctgtttgacatggtttgtgagtcttctgttacagatgaggatagtgacttt
gaaccccaaacccaaaggcctcaaagcattgctcgcaaaagacctggggtagtcccatct
tccctccattcaagctcccagacgcagatggttgacgaatgcagcaatgatgtcatcatc
aagaaaatcaaacaagaaatccccgaagattattacattgtggcaaatgcagaactgaca
ggaggagtagatggaccagccctgtccttgacacagatggcaaaacccaagcctcagact
cacgctggtccctcctgtgtagggtctgctaaactgattccccatgtcacatctgccatc
agcacggagctagacccacacggtatgtctgcatccccctctgtgatctccagaccaatt
gtccagaagactgctagggtatctctggcttcaccaaacagaggaccccctggtacacat
ggcaccaaccaacaggtggccatgcaaatgcctgtgagcacatcccatcctaacaaacag
atcagtatccccttgtctgccctgcagctgcctggacaggatgagcaagttgcctctgaa
gagttcctgtcccatctgcccagccaggtctcctcctgtgaggtagccctttctccctca
gttaacacagagccagaagtgagctccagtcagcagcagcccccagtcgctccagccata
accactgaggccacagcacagtgcataccaggtatggcacatgaggcgacagtgagtccc
tcatccacgcacgccagaattctgcgccgtcagcacttctaa

>gi568815589f:112474081_112718913|GENSCAN_predicted_peptide_5|396_aa
MDWKETPQIHSSGFLRGGGNGNRPESRMGYVVKSRTEQVDWQGCLSRADQDERAAELSRE
QNEKTIRSTQTALRNFREFLISKYPSETREIYVIPCKELDAYLASFFVDARQKDGSEYEP
NSLANYQCGLERYLKEHRYGYSITRDKEFKRSQEALKQKQIELRCKGKGNKPHKSMKLTF
ADELILRKRGLLSRYNPEGLLNLVWLNNTKAFGHCTGFHGSTLKWGDIRLRVTETGLEYL
EWMGQDTGDLNAKTKRGGTDSRVYATQHAPQTCPVQDYKEYAQRRPPAMRYEDAPFYLSI
KPVVNLAALHWYNCQALGKNKLAKMVKTMCEKGNIPGRKTNFSVYQSCSTLSEAQSNQLV
LICNNLSQQAAQSVAGHSNNGNFIVSASYDSSSDTA

>gi568815589f:112474081_112718913|GENSCAN_predicted_CDS_5|1191_bp
atggactggaaggagacaccccagatacacagtagtggttttcttcgaggagggggtaat
ggaaacaggcctgaaagtaggatgggatatgttgtgaaaagtaggacggaacaagttgat
tggcagggctgcctttccagagcagaccaggatgaaagagcagctgagctcagcagggag
cagaacgagaaaaccatccggagcacgcagaccgcgctccgcaatttccgtgagttcctc
atctccaagtatccttctgaaacaagagagatttatgtcatcccttgcaaggagttggat
gcctaccttgcctctttctttgttgatgccaggcagaaggatgggtccgaatacgaaccc
aacagcttggccaattaccagtgtgggctcgaaaggtacctgaaagaacacaggtatggc
tatagcatcaccagggataaggaattcaagcgttcccaagaggccctgaagcagaagcaa
attgaactccgctgtaaaggaaaaggaaataagccacacaagtccatgaagctcaccttt
gctgacgagctcatcctgcggaaaaggggactgctaagccgatataaccccgagggtttg
ctcaacctagtctggctcaacaacacaaaagcttttgggcattgcacaggcttccatgga
tctaccttaaaatggggtgatatccggctccgggtaacagagacgggtctcgagtacttg
gagtggatgggtcaggacactggagacttgaatgccaaaaccaagagaggggggacagac
tcccgtgtgtatgccacccagcacgccccacagacctgccctgtccaggactataaggag
tatgcccagcggcggcctcccgccatgcgctacgaggatgcccctttctacttatccatc
aagccagtcgtgaacctggcggctctgcattggtacaactgccaggcccttggcaagaac
aagctggccaagatggtgaagaccatgtgtgagaagggcaacatccctggcaggaaaacc
aacttcagtgtgtatcagagctgcagcaccttgtctgaggcccagagcaaccagctcgtg
ctgatctgtaacaatctgagccagcaggctgcccagtcagtggccggccactccaacaat
ggcaatttcatcgtctccgcctcctatgactcttcctcagacaccgcttga

>gi568815589f:112474081_112718913|GENSCAN_predicted_peptide_6|91_aa
MLRGSRKAYSTKLNKFPVFNINDDLNDLCTSAVSPNTTKATRYALNVWRYWCMTNGLKDH
TDITKLCEKSTPHKEAEAKDENPDGLGVRSF

>gi568815589f:112474081_112718913|GENSCAN_predicted_CDS_6|276_bp
atgctcagagggagcaggaaagcttattccactaagctcaacaaatttcctgtatttaat
attaatgatgacttgaatgatctgtgtaccagtgcagtaagcccaaatactaccaaagcc
acgcggtacgccttgaatgtgtggcgttattggtgcatgaccaacgggctcaaagaccac
acagacatcaccaagctatgtgaaaaaagcactccgcacaaagaagcagaggcgaaagat
gagaatcctgatggccttggagtccgctcgttctga

>gi568815589f:112474081_112718913|GENSCAN_predicted_peptide_7|300_aa
MSSTQPLVRIRRKEGSGCVSVKCVTSVFVSFEIPAVKLNELLENFYVTVKKSDGSDFLAT
SLHAIRRGLDRILKNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGARSRNIVYFSLS
DEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIELLKDPQNQPYFA
RTDSVKRESRSGSTRVCHGKIYHEHSRGHKQCPYCLLYKYMYIHRPPTQMEAKSPFYLTA
RKEATDMGSVWYEEQRMGLRSLRGIVPNLAKKVKLENCENFTFVSFTQVSRRLGSHSCCQ

>gi568815589f:112474081_112718913|GENSCAN_predicted_CDS_7|903_bp
atgtcctcaacacagcccctggtgaggattagaaggaaggaggggtctggctgtgtgagt
gtcaagtgtgtaacctccgtgtttgtctcatttgagatccctgcagtgaagttgaacgag
ctgctcgagaacttttatgtcaccgtcaagaagagcgacggctcggacttcctggccacc
tcgctccatgctattcgccgaggcctggaccgcatcctgaagaatgcaggtgtcggcttt
tccatcaccagcagcaccttcagctcctccaccaagaaactcaaggagaagctgtgggtg
ctgagtaaggcaggcatgtcgggcgcgcgttctcgcaacatcgtctacttctccctttct
gacgaggaggagatgtggcaggcagggtgtctgggggatgacagccctatcactctcctg
tccactgtggtcaagtacaacagccagtacctgaacatgcggacgctgcaggagcatgcg
gatctgatgtatggtgacatcgagctgctcaaagacccccaaaaccagccctactttgcc
cggacggacagcgtcaagcgggagagtcggagcggctccaccagagtgtgtcacgggaag
atctaccatgagcattcccggggacacaaacagtgcccttactgcctcctctacaagtac
atgtacatccaccggccgcccacccaaatggaggccaagtcccccttctacctgactgcc
aggaaggaggccacagacatgggcagcgtgtggtatgaggagcagaggatggggctgcgc
tctcttcggggaattgtcccaaacttagccaagaaggtcaagctggaaaactgtgagaac
ttcacctttgtctcgttcactcaggtctcccggaggcttggctcccacagctgctgccag
tga

>gi568815589f:112474081_112718913|GENSCAN_predicted_peptide_8|233_aa
MSRQITGNEANRRLDPFQSIWNSRVRQTSSLVHSGETLNICGHRQICIGHAPSPTAGVLQ
GKPTVPQQQEWALHAPNQSGSFLIATVIASELSMLPISRSSHPVVSGAHSSQASVSTDSL
KLSLENCQSSPLGQIQWDVCTGATIWGKKEKAGDGTITSFTLLTASYIVQNDVSSVKKLW
LSKVISAFAQVRSEVALSPVIFQVQQDASVSTRVLLCPDSPNDYVYENAECGI

>gi568815589f:112474081_112718913|GENSCAN_predicted_CDS_8|702_bp
atgtctaggcagataactggaaacgaggctaaccggaggttagatccattccagagcatc
tggaattccagggtgcgccagacctctagcttggtacacagcggggagacattgaacatt
tgtgggcataggcagatttgtattggccacgctccttccccaacagccggtgtccttcag
gggaagccaacagtgccccaacaacaggaatgggccttacatgctccgaaccagtcaggg
tcattccttattgccacagtgattgcctcagagttgtctatgctgcccatctccagatcc
tctcatcccgttgtctctggagcccactccagtcaagcttctgtctccacagactcactg
aaattatccttggaaaactgccagtcatctccacttggccaaatccaatgggatgtatgc
acaggtgcgaccatctgggggaagaaggaaaaagctggagacggtacaataacatcattc
acgttactgaccgcttcctacatcgttcagaatgatgtttccagtgttaagaaattatgg
ctaagcaaagtgatatcggcatttgcccaagtgaggagtgaagtagctctgagtccagtt
atctttcaagtacagcaagatgcttccgtttctacaagagtattactttgtccagattct
cctaatgactatgtctatgaaaatgctgagtgtggcatataa

>gi568815589f:112474081_112718913|GENSCAN_predicted_peptide_9|111_aa
SSDCKERRSRCPRVPGFQNKNRVAILAELDKEKRKLLMQNQSSTNHPGASIALSRPSLNK
DFRDHAEQQHIAAQQKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLDPE

>gi568815589f:112474081_112718913|GENSCAN_predicted_CDS_9|336_bp
agcagcgattgtaaggagaggcggtcccggtgtcctcgggtcccaggttttcaaaacaaa
aatagagttgcaatcttggcagaactggacaaagagaaaagaaaactacttatgcagaac
cagtcttcaacaaatcatcctggagctagcattgcactctcgagaccctctcttaataag
gacttccgggatcacgctgagcagcagcatattgcagcccaacagaaggcagctttgcag
catgctcatgcacattcatctggatacttcatcactcaagactctgcatttgggaacctt
attcttcctgttttacctcgccttgacccagaatga