GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:48:12

Sequence gi568815597f:206535704_206748962 : 213259 bp : 46.50% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    262    301   40  0  1   81   89    41 0.682   1.30
 1.02 Intr +   2469   2590  122  1  2  108   96   102 0.886  13.21
 1.03 Term +  11682  11750   69  2  0   80   39   111 0.717   3.34
 1.04 PlyA +  11921  11926    6                               1.05

 2.06 PlyA -  12079  12074    6                               1.05
 2.05 Term -  16194  16120   75  0  0   94   43    70 0.647   0.94
 2.04 Intr -  18032  17982   51  2  0  124   98   -11 0.810   2.60
 2.03 Intr -  21953  21801  153  2  0   23   64   191 0.391  10.47
 2.02 Intr -  29042  28936  107  0  2  -12  119    61 0.159  -0.87
 2.01 Init -  36946  36892   55  1  1   95   91    17 0.564   4.15
 2.00 Prom -  37081  37042   40                              -4.16

 3.00 Prom +  37792  37831   40                              -6.96
 3.01 Init +  45160  45222   63  0  0   84   93    32 0.619   4.49
 3.02 Intr +  47566  47676  111  0  0   97  107   138 0.964  17.18
 3.03 Intr +  48684  48981  298  2  1   76   97   578 0.999  53.95
 3.04 Intr +  49477  49592  116  2  2   81   92   144 0.837  14.27
 3.05 Intr +  51123  51271  149  2  2   82   26   172 0.371   9.43
 3.06 Term +  54463  54577  115  1  1   91   49    63 0.117   0.74
 3.07 PlyA +  55949  55954    6                               1.05

 4.17 PlyA -  55962  55957    6                               1.05
 4.16 Term -  56142  56072   71  1  2   27   48   102 0.727  -1.80
 4.15 Intr -  58090  57916  175  1  1  116   85   207 0.905  22.71
 4.14 Intr -  60135  60015  121  2  1   81   86    44 0.999   4.00
 4.13 Intr -  61492  61397   96  0  0   87   97    30 0.883   2.92
 4.12 Intr -  63389  63300   90  1  0  100   87   165 0.999  16.71
 4.11 Intr -  63909  63760  150  2  0   85   89    80 0.992   7.08
 4.10 Intr -  64133  64030  104  2  2   82  105   141 0.995  14.17
 4.09 Intr -  64605  64560   46  2  1   62  121    35 0.979   2.61
 4.08 Intr -  66750  66633  118  1  1   99   60     6 0.970  -1.58
 4.07 Intr -  67501  67248  254  0  2   29   70   202 0.973   9.58
 4.06 Intr -  69804  69697  108  2  0  102   52    72 0.860   4.40
 4.05 Intr -  72623  72533   91  0  1   91   84    10 0.960  -0.05
 4.04 Intr -  73756  73673   84  2  0   53  110    50 0.770   3.49
 4.03 Intr -  75671  75481  191  1  2   77   80   217 0.980  19.03
 4.02 Intr -  76654  76584   71  1  2  116   94   135 0.424  14.88
 4.01 Init -  88243  88184   60  1  0   71  100    10 0.417   1.75
 4.00 Prom -  88328  88289   40                              -4.26

 5.00 Prom +  90231  90270   40                              -3.76
 5.01 Init + 100035 100093   59  2  2   73   49    80 0.208   1.44
 5.02 Intr + 101947 102058  112  1  1   73  101    38 0.255   3.98
 5.03 Intr + 111685 113115 1431  0  0  116   35   963 0.015  83.55
 5.04 Intr + 129406 129501   96  0  0   90   82     2 0.071   0.01
 5.05 Intr + 137324 137463  140  1  2   67   54    91 0.191   2.86
 5.06 Intr + 145813 145887   75  1  0  -40  100   205 0.225   7.53
 5.07 Intr + 146887 146923   37  1  1  100   75    12 0.076  -0.64
 5.08 Intr + 149545 149805  261  0  0   66   56   482 0.004  40.48
 5.09 Intr + 158210 158357  148  1  1   82   70    50 0.063   2.41
 5.10 Intr + 170596 170724  129  2  0   96   43    42 0.001   1.17
 5.11 Intr + 170863 170911   49  2  1   96   74    23 0.000  -0.56
 5.12 Intr + 191350 191446   97  1  1  113   65    49 0.220   5.11
 5.13 Intr + 193007 193146  140  1  2   52  103   247 0.410  21.86
 5.14 Intr + 193332 193396   65  0  2   44   60    56 0.943  -3.24
 5.15 Intr + 193693 193772   80  2  2  119   45   110 0.695   9.07
 5.16 Intr + 194269 194395  127  0  1   91  106   135 0.999  15.85
 5.17 Intr + 194985 195060   76  1  1   79   76    92 0.988   5.67
 5.18 Intr + 195435 195559  125  0  2   85  116   170 0.998  19.73
 5.19 Intr + 195937 196022   86  2  2  108  103   114 0.999  14.44
 5.20 Intr + 196136 196216   81  1  0  100  100    50 0.991   7.23
 5.21 Term + 196872 197015  144  2  0  101   52   227 0.998  18.31
 5.22 PlyA + 202194 202199    6                               1.05

 6.02 PlyA - 204656 204651    6                               1.05
 6.01 Term - 205662 205592   71  1  2  103   46    76 0.820   3.00

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 171430 171252  179  1  2   41   94   135 0.932   8.13


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:206535704_206748962|GENSCAN_predicted_peptide_1|76_aa
SILHRSELYQSHTDCKFTCHPECRSLIQLDCSQQEGLSRDRPSPESTLTVTFSQTSGSIR
FSEEPEPYCELRMRGI

>gi568815597f:206535704_206748962|GENSCAN_predicted_CDS_1|231_bp
agcattcttcatcgctcagagctctaccagagccatacagactgtaaattcacctgtcac
ccagaatgccgcagcctgatccagttggactgcagtcagcaggagggtttatcccgggac
agaccctctccagaaagcaccctcaccgtgaccttcagccagaccagcggcagcattaga
ttctcggaggagcctgaaccctattgtgaactgcgcatgcgagggatctag

>gi568815597f:206535704_206748962|GENSCAN_predicted_peptide_2|146_aa
MPAVPHGEVTILSSCSVPGRLNHEEEETKDLQDRSQFPTQGAPKARRYTGVGYLVVLAVK
KQSSSSSSRLQYPLLMLLSTVIYPGVPGRGRQRIKGAGLGMRRRELPGVFSSPPVYPCSP
WGGQSSNIPGSMVTRVRCEQLLHCYI

>gi568815597f:206535704_206748962|GENSCAN_predicted_CDS_2|441_bp
atgcctgctgtgcctcatggagaagtgaccatactttccagctgttcagtcccaggtaga
ctaaaccatgaagaagaagaaaccaaggacctgcaggacaggtctcagttccccacccag
ggagctcccaaagccagaagatacacaggtgtggggtacctggtagtcttagcagtgaag
aagcagtcttccagttcctcgtccaggctgcagtacccactgctcatgctgctgtccacg
gtcatctaccccggagttcccggccgaggccgccagcgcatcaagggggccgggcttggg
atgcggcggagggagcttcctggggtcttctcttctccccctgtgtacccctgctctcct
tgggggggccaatcctccaacatcccgggcagcatggtcaccagggtgagatgtgaacaa
ctattgcactgctacatctag

>gi568815597f:206535704_206748962|GENSCAN_predicted_peptide_3|283_aa
MVPLGPDPLLRLILDEHFTDQNVCKPVEETQRPPTLQEIKQKIDSYNTREKNCLGMKLSE
DGTYTGFIKVHLKLRRPVTVPAGIRPQSIYDAIKEVNLAATTDKRTSFYLPLDAIKQLHI
SSTTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQVLFQKLSIADRPLYLRLLAGPDT
EVLSFVLKENETGEVEWDAFSIPELQNFLTILEKEEQDKIQQVQKKYDKFRQKLEEALRE
SQGKPGGRGKMTQCKCVTVTGKTTQCTGLDSTVSWQNCGSNHN

>gi568815597f:206535704_206748962|GENSCAN_predicted_CDS_3|852_bp
atggtgcctctggggcctgacccgctgcttagactcatcttagatgaacatttcacagat
cagaatgtctgtaaacctgtggaggagacacagcgcccgcccacactgcaggagatcaag
cagaagatcgacagctacaacacgcgagagaagaactgcctgggcatgaaactgagtgaa
gacggcacctacacgggtttcatcaaagtgcatctgaaactccggcggcctgtgacggtg
cctgctgggatccggccccagtccatctatgatgccatcaaggaggtgaacctggcggct
accacggacaagcggacatccttctacctgcccctagatgccatcaagcagctgcacatc
agcagcaccaccaccgtcagtgaggtcatccaggggctgctcaagaagttcatggttgtg
gacaatccccagaagtttgcactttttaagcggatacacaaggacggacaagtgctcttc
cagaaactctccattgctgaccgccccctctacctgcgcctgcttgctgggcctgacacg
gaggtcctcagctttgtgctaaaggagaatgaaactggagaggtagagtgggatgccttc
tccatccctgaacttcagaacttcctaacaatcctggaaaaagaggagcaggacaaaatc
caacaagtgcaaaagaagtatgacaagtttaggcagaaactggaggaggccttaagagaa
tcccagggcaaacctggggggagagggaagatgactcaatgcaaatgtgtcaccgttact
ggaaaaaccactcaatgcacaggtctggacagcactgtgtcatggcagaattgtgggtca
aaccacaattaa

>gi568815597f:206535704_206748962|GENSCAN_predicted_peptide_4|609_aa
MIRLSSPGPPLDMWGLLQFKATPADMFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGT
DQVSELVPGKEELNIVKLYAHKGDAVTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPT
FTTWPLVLEKLVGGADLMLPGLVMPPAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAE
MLTSGLKGRGFSVLHTYQDHLWRSGNKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDM
RHMTLEGEEENGEVHQAREDKSLSEAPEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHA
LKCRVKKADLPLLTSTFLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKEL
SKGVESIVAVDWKHPRITSFVIPEPSPTSQTIQEGSREQPYHPPDIKPLYCVPASMTLLF
QESGHKKGSFLEGSEVRTIVINYAKKNDLVDADNKNLVRLDPILCDCILEKNEQHTVMKL
PWDSLLTRCLEKLQPAYQVTLPGQEPIVKKGRICPIDITLAQRASNKKVTVVRNLEAYGL
DPYSVAAILQQRCQASTTVNPAPGAKDSLQVQIQGNQVHHLGWLLLEEYQLPRKHIQGLE
KALKPGKKK

>gi568815597f:206535704_206748962|GENSCAN_predicted_CDS_4|1830_bp
atgattcgattatcttcacctggtcccccacttgacatgtggggattattacaattcaag
gccaccccagcagacatgtttgccaaggcctttcgggtcaagtccaacacggccatcaag
gggtcggacaggagaaagcttcgagctgatgtgacaactgctttccccacccttggaact
gatcaagtctctgagttagtacctggaaaggaggagctcaacattgtgaagttgtatgct
cacaaaggggatgcagtgactgtgtacgtgagtggtggtaaccccatcctctttgaactg
gagaaaaatctgtatccaacagtgtacacgctgtggtcctatcctgatcttctgccaacc
tttacaacatggcctctggtgctcgagaaactggtagggggagcagatttgatgctgcct
ggactggtgatgccccctgctggtctgcctcaggtacagaagggcgacctctgtgccatt
tctttggtggggaacagagcccctgtagccattggagttgcagccatgtccacagctgag
atgctcacgtcaggcctgaagggaaggggcttctctgtgctccacacttaccaggaccac
ttgtggcggtctggaaacaagtcctctccaccttccattgctccactggccctggattca
gcagatctcagtgaagagaaggggtctgtccagatggactccaccctgcagggagacatg
aggcacatgaccctggagggggaagaggagaatggggaggttcaccaggcacgtgaagac
aagtctctctcagaagccccagaagacaccagcaccaggggcctgaaccaagactccaca
gatagcaaaacgcttcaagaacaaatggatgagctgttacagcaatgcttcttacatgcc
ttgaagtgccgagtcaaaaaggctgacctccctttactcaccagcactttccttggcagc
cacatgttctcctgctgccccgaaggacgacaactggacataaagaagtcaagctacaaa
aagctctctaagttcctgcagcaaatgcagcaggagcagattatacaggtgaaggagctg
agcaaaggggtggagagcattgtggctgtggactggaaacacccgaggattacatctttc
gtcatacccgagccctccccgacctcccagactatccaggagggtagcagggaacagccc
tatcaccctccagatataaaacccctctactgtgtcccagccagcatgaccctgctcttc
caggagtctggccacaagaaggggagctttctggagggcagtgaggtccgaacgatcgtc
attaactacgccaagaaaaatgacctggttgatgcagacaacaaaaatcttgtgagattg
gatcccatcctatgtgactgcatcttagagaaaaatgaacagcatacagtcatgaagctt
ccatgggacagtcttctgaccaggtgtttggaaaaattacagcctgcctatcaagtgacc
cttcccggacaagagcccattgtgaagaaagggagaatctgtccaattgacatcacccta
gcacaaagagcgtctaataaaaaggtgaccgtggtccggaacttggaggcctatggtctg
gacccatactcagtggctgccatccttcagcagcgatgccaggctagcaccaccgtcaat
cctgcccctggggccaaggacagccttcaggtgcagatccagggaaaccaggtccaccac
ctcggctggctattgcttgaagagtatcagctccctcgaaaacacatccaaggtctagaa
aaggccctcaaacctggcaagaagaagtga

>gi568815597f:206535704_206748962|GENSCAN_predicted_peptide_5|1185_aa
MRGRLGPGSRPSSGGNGATGLGDGVYDTFMMIDETKCPPCSNVLCNPSEPPPPRRLNMTT
EQFTGDHTQHFLDGGEMKVEQLFQEFGNRKSNTIQSDGISDSEKCSPTVSQGKSSDCLNT
VKSNSSSKAPKVVPLTPEQALKQYKHHLTAYEKLEIINYPEIYFVGPNAKKRHGVIGGPN
NGGYDDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRF
HRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFRNHVCMAFELLSIDLYELIKKNKFQG
FSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILLKHHGRSSTKVIDFGSSCFEYQKL
YTYIQSRFYRAPEIILGSRYSTPIDIWSFGCILAELLTGQPLFPGEDEGDQLACMMELLG
MPPPKLLEQSKRAKYFINSKGIPRYCSVTTQADGRVVLVGGRSRRGKKRGPPGSKDWGTA
LKGCDDYLFIEFLKRCLHWDPSARLTPAQALRHPWISKSVPRPLTTIDKVSGKRMLDFVG
ETQDREQILVLPKGDTSPMLVTLFPQHEKQEVKLTKMPSDMWLTLSPQLDLKAKEKLAKE
NCSPATSFNNFWWKHSKNIVIVIIIIIINIIITIIMRRPIWLLQLREDSQGQSPPVPFPA
PAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGING
KVLQIFNKRTQEKFALKLSHMQNVTECMGFFYLLTAVLMCVHGGVASSSTPQGSWRLVEQ
DEERGSATETQSHSDGGGAKPVPLIIASLLVEKGQMLLCSYPDHPAGRLGSKPLPRTSEL
TEAGMGMSLGHPSPLNVQSSWSVDCVGLILTSHEDAKSMLQDCPKARREVELHWRASQCP
HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ
YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL
GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS
EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKEE
MTSALATMRVDYEQIKIKKIEDASNPLLLKRRKKARALEAAALAH

>gi568815597f:206535704_206748962|GENSCAN_predicted_CDS_5|3558_bp
atgcggggccgcctggggccgggctcccgccccagcagcggaggtaacggcgccacgggg
ttgggggatggtgtctatgacaccttcatgatgatagatgaaaccaaatgtcccccctgt
tcaaatgtactctgcaatccttctgaaccacctccacccagaagactaaatatgaccact
gagcagtttacaggagatcatactcagcactttttggatggaggtgagatgaaggtagaa
cagctgtttcaagaatttggcaacagaaaatccaatactattcagtcagatggcatcagt
gactctgaaaaatgctctcctactgtttctcagggtaaaagttcagattgcttgaataca
gtaaaatccaacagttcatccaaggcacccaaagtggtgcctctgactccagaacaagcc
ctgaagcaatataaacaccacctcactgcctatgagaaactggaaataattaattatcca
gaaatttactttgtaggtccaaatgccaagaaaagacatggagttattggtggtcccaat
aatggagggtatgatgatgcagatggggcctatattcatgtacctcgagaccatctagct
tatcgatatgaggtgctgaaaattattggcaaggggagttttgggcaggtggccagggtc
tatgatcacaaacttcgacagtacgtggccctaaaaatggtgcgcaatgagaagcgcttt
catcgtcaagcagctgaggagatccggattttggagcatcttaagaaacaggataaaact
ggtagtatgaacgttatccacatgctggaaagtttcacattccggaaccatgtttgcatg
gcctttgaattgctgagcatagacctttatgagctgattaaaaaaaataagtttcagggt
tttagcgtccagttggtacgcaagtttgcccagtccatcttgcaatctttggatgccctc
cacaaaaataagattattcactgcgatctgaagccagaaaacattctcctgaaacaccac
gggcgcagttcaaccaaggtcattgactttgggtccagctgtttcgagtaccagaagctc
tacacatatatccagtctcggttctacagagctccagaaatcatcttaggaagccgctac
agcacaccaattgacatatggagttttggctgcatccttgcagaacttttaacaggacag
cctctcttccctggagaggatgaaggagaccagttggcctgcatgatggagcttctaggg
atgccaccaccaaaacttctggagcaatccaaacgtgccaagtactttattaattccaag
ggcataccccgctactgctctgtgactacccaggcagatgggagggttgtgcttgtgggg
ggtcgctcacgtaggggtaaaaagcggggtcccccaggcagcaaagactgggggacagca
ctgaaagggtgtgatgactacttgtttatagagttcttgaaaaggtgtcttcactgggac
ccctctgcccgcttgaccccagctcaagcattaagacacccttggattagcaagtctgtc
cccagacctctcaccaccatagacaaggtgtcagggaaacggatgctggattttgttggt
gagacacaagacagagaacaaattcttgttctccctaagggagatacttcgcccatgctt
gtgactctctttccacagcatgagaaacaggaagtgaaactgactaaaatgcccagtgat
atgtggctgaccctgtctcctcagctggacctaaaggcaaaggagaaactggccaaagaa
aactgtagccctgccacaagctttaacaacttctggtggaagcactcaaaaaacattgtc
atcgtcatcatcatcatcatcatcaacatcatcatcaccatcatcatgagaaggcctatt
tggctcttgcagctccgggaggactctcagggccagagcccgccggtgccgttccccgcc
ccggccccgccgccgcagccccccacccctgccctgccgcaccccccggcgcagccgccg
ccgccgcccccgcagcagttcccgcagttccacgtcaagtccggcctgcagatcaagaag
aacgccatcatcgatgactacaaggtcaccagccaggtcctggggctgggcatcaacggc
aaagttttgcagatcttcaacaagaggacccaggagaaattcgccctcaaactcagccac
atgcagaatgtcaccgagtgcatgggtttcttctacctcttgactgcagtattgatgtgt
gtccatggaggtgtggcctcttcctctactccccagggatcctggagacttgtggagcaa
gatgaggaaaggggctcagccacagagacccagagtcactcagatgggggaggagcaaag
ccagtccctctgatcattgcctctttgttagtggagaaagggcagatgctgctctgcagt
tatcccgaccaccctgcaggacgtctggggagcaagcccttgccaagaacctctgagctc
accgaggcgggtatgggcatgtctcttggacaccccagccctctgaatgtccaaagcagt
tggagtgtggactgtgtagggctcatcttgacttcccatgaagatgctaaatctatgctt
caggactgccccaaggcccgcagggaggtggagctgcactggcgggcctcccagtgcccg
cacatcgtacggatcgtggatgtgtacgagaatctgtacgcagggaggaagtgcctgctg
attgtcatggaatgtttggacggtggagaactctttagccgaatccaggatcgaggagac
caggcattcacagaaagagaagcatccgaaatcatgaagagcatcggtgaggccatccag
tatctgcattcaatcaacattgcccatcgggatgtcaagcctgagaatctcttatacacc
tccaaaaggcccaacgccatcctgaaactcactgactttggctttgccaaggaaaccacc
agccacaactctttgaccactccttgttatacaccgtactatgtggctccagaagtgctg
ggtccagagaagtatgacaagtcctgtgacatgtggtccctgggtgtcatcatgtacatc
ctgctgtgtgggtatccccccttctactccaaccacggccttgccatctctccgggcatg
aagactcgcatccgaatgggccagtatgaatttcccaacccagaatggtcagaagtatca
gaggaagtgaagatgctcattcggaatctgctgaaaacagagcccacccagagaatgacc
atcaccgagtttatgaaccacccttggatcatgcaatcaacaaaggtccctcaaacccca
ctgcacaccagccgggtcctgaaggaggacaaggagcggtgggaggatgtcaaggaggag
atgaccagtgccttggccacaatgcgcgttgactacgagcagatcaagataaaaaagatt
gaagatgcatccaaccctctgctgctgaagaggcggaagaaagctcgggccctggaggct
gcggctctggcccactga

>gi568815597f:206535704_206748962|GENSCAN_predicted_peptide_6|23_aa
XICMPVREAGSPVKIKHQEAKQG

>gi568815597f:206535704_206748962|GENSCAN_predicted_CDS_6|72_bp
ngcatttgcatgccagtcagagaagcaggtagcccggtcaagatcaaacaccaggaggcc
aaacaaggctga