GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:27:50

Sequence gi568815592f:2910023_3119652 : 209630 bp : 45.49% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.13 PlyA -    513    508    6                               1.05
 1.12 Term -   5449   5277  173  2  2   98   29    97 0.559   2.79
 1.11 Intr -  30465  30293  173  2  2   74    3   173 0.019   6.99
 1.10 Intr -  38677  38280  398  1  2  105   47   531 0.256  44.08
 1.09 Intr -  39047  38892  156  2  0  107   44    74 0.968   5.11
 1.08 Intr -  40813  40753   61  0  1   27   30    90 0.390  -4.16
 1.07 Intr -  41823  41718  106  1  1   94   34    42 0.417  -1.33
 1.06 Intr -  43164  43018  147  1  0   69   63   125 0.830   8.31
 1.05 Intr -  44687  44570  118  2  1   57   62    69 0.974   1.24
 1.04 Intr -  45648  45502  147  0  0   82   89    75 0.993   7.43
 1.03 Intr -  49320  49146  175  2  1   79   92   205 0.941  19.94
 1.02 Intr -  56568  56378  191  0  2   42  106    66 0.006   2.18
 1.01 Init -  63886  63800   87  1  0   57   98    52 0.079   3.75
 1.00 Prom -  70282  70243   40                              -6.36

 2.00 Prom +  73566  73605   40                              -3.06
 2.01 Init +  78649  78687   39  0  0   87   96    34 0.581   4.34
 2.02 Intr +  79026  79128  103  2  1   70   24    74 0.659  -1.05
 2.03 Intr +  79506  79688  183  1  0   94   33    58 0.321   0.66
 2.04 Intr +  89947  90063  117  2  0   63  113   115 0.897  11.94
 2.05 Intr +  93164  93200   37  0  1  112   95   -26 0.151  -2.18
 2.06 Intr +  96446  96537   92  2  2  125   95    99 0.450  13.94
 2.07 Intr + 100003 100167  165  2  0   39  105   160 0.803  12.73
 2.08 Intr + 102522 102652  131  1  2   77   72   107 0.751   8.41
 2.09 Intr + 105508 105621  114  0  0   85   91   128 0.999  13.44
 2.10 Intr + 106862 106963  102  1  0  109   74    86 0.997   9.67
 2.11 Term + 109457 109633  177  1  0   74   35    90 0.535  -0.01
 2.12 PlyA + 109713 109718    6                               1.05

 3.03 PlyA - 110668 110663    6                               1.05
 3.02 Term - 113586 113113  474  0  0  -12   44   324 0.171  12.89
 3.01 Init - 117948 117820  129  0  0   88   15   152 0.224   6.51
 3.00 Prom - 127681 127642   40                              -2.86

 4.00 Prom + 129710 129749   40                              -2.86
 4.01 Init + 135362 135699  338  1  2  107   36   371 0.005  30.55
 4.02 Intr + 135939 136102  164  0  2   73   81    97 0.004   7.12
 4.03 Intr + 143197 143335  139  2  1   43  115    28 0.013   0.52
 4.04 Intr + 144329 144429  101  2  2   89   93    16 0.018   1.95
 4.05 Intr + 149163 149288  126  1  0   -3   73   101 0.003   0.15
 4.06 Intr + 153573 153678  106  1  1   96   47    62 0.001   2.17
 4.07 Intr + 158441 158639  199  2  1   63   89    58 0.003   2.75
 4.08 Intr + 166742 166965  224  1  2  124   61   179 0.319  15.73
 4.09 Intr + 167757 167913  157  0  1  102   65   264 0.999  25.51
 4.10 Intr + 170957 171094  138  1  0   45   92    84 0.962   5.16
 4.11 Intr + 173093 173291  199  1  1   56   78   336 0.733  28.32
 4.12 Intr + 175237 175386  150  2  0   24   99    97 0.600   4.53
 4.13 Intr + 176570 176611   42  0  0   74  100    32 0.659   1.21
 4.14 Intr + 179559 179635   77  1  2   64  102    33 0.576   1.53
 4.15 Term + 182165 182620  456  1  0    1   39   274 0.220   8.93
 4.16 PlyA + 184435 184440    6                               1.05

 5.00 Prom + 188534 188573   40                              -4.96
 5.01 Init + 195504 196029  526  2  1   45   99   235 0.216  15.32
 5.02 Intr + 200781 200933  153  1  0   98   91    65 0.750   7.84
 5.03 Term + 203031 203317  287  1  2   91   40   327 0.971  23.77
 5.04 PlyA + 203658 203663    6                               1.05

 6.00 Prom + 204045 204084   40                              -6.56
 6.01 Init + 208719 208825  107  2  2   98   62   182 0.827  14.32
 6.02 Term + 209263 209290   28  1  1   74   48    53 0.455  -2.55
 6.03 PlyA + 209504 209509    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 135362 135778  417  1  0  107   42   479 0.995  41.50
S.002 Term - 154120 153912  209  2  2  116   39   167 0.929  12.10


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:2910023_3119652|GENSCAN_predicted_peptide_1|643_aa
MCDGRTAPTTTSYRVHAVNSVAVEKLCLRHATKITTCTVHRRFTLLQDSNAATDLTGGGA
QAVMFAHLLLTSCCVAQFLTDHRRICWGLLHIKSAIMDVLAEANGTFALNLLKTLGKDNS
KNVFFSPMSMSCALAMVYMGAKGNTAAQMAQILSFNKSGGGGDIHQGFQSLLTEVNKTGT
QYLLRMANRLFGEKSCDFLSSFRDSCQKFYQAEMEELDFISAVEKSRKHINTWVAEKTEG
KIAELLSPGSVDPLTRLVLVNAVYFRGNWDEQFDKENTEERLFKVSKAKRESCFLYGVGQ
NYRSCGFGEMWNPVMLSEFCSEEGRMCYTRDWGPYGVFDCAYCRNEEKPVQMMFKQSTFK
KTYIGEIFTQILVLPYVGKELNMIIMLPDETTDLRTVEKELTYEKFVEWTRLDMMDEEEV
EVSLPRFKLEESYDMESVLRNLGMTDAFELGKADFSGMSQTDLSLSKVVHKSFVEVNEEG
TEAAAATAAIMMMRCARFVPRFCADHPFLFFIQHSKTNGILFCGRFSSPNKVTIFAVSAT
AHKGNADAKCKRTNLITAQKTPTGYHYKLRQPAFILLSGPTHILLIGCTWVIQPLSHGSI
PPGPAPSDVSTGPKSTPPTQVSTWDLGFIFDVYAKAALDSSLA

>gi568815592f:2910023_3119652|GENSCAN_predicted_CDS_1|1932_bp
atgtgtgatggcaggacagcccccacaaccacaagttatcgggttcatgcggtcaacagt
gtcgcagttgagaaactctgccttaggcatgcaaccaagatcaccacgtgcacagttcac
cgtaggttcactctcctacaagactccaacgctgccactgacctaacaggaggtggagct
caggcggtgatgttcgctcacctgctgctcacctcctgctgcgtggcccagttcctaaca
gaccacagacggatctgctggggactcctgcatataaagtctgccatcatggatgttctc
gcagaagcaaatggcacctttgccttaaaccttttgaaaacgctgggtaaagacaactcg
aagaatgtgtttttctcacccatgagcatgtcctgtgccctggccatggtctacatgggg
gcaaagggaaacaccgctgcacagatggcccagatactttctttcaataaaagtggcggt
ggtggagacatccaccagggcttccagtctcttctcaccgaagtgaacaagactggcacg
cagtacttgcttaggatggccaacaggctctttggggaaaagtcttgtgatttcctctca
tcttttagagattcctgccaaaaattctaccaagcagagatggaggagcttgactttatc
agcgccgtagagaagtccagaaaacacataaacacctgggtagctgaaaagacagaaggt
aaaattgcggagttgctctctccgggctcagtggatccattgacaaggctggttctggtg
aatgctgtctatttcagaggaaactgggatgaacagtttgacaaggagaacaccgaggag
agactgtttaaagtcagcaaggcgaaaagggaaagctgctttctatatggtgtaggccag
aactataggtcttgtgggtttggggagatgtggaatcccgtcatgctttctgagttctgc
agtgaagaaggaagaatgtgctacaccagagactggggaccatacggcgtctttgactgt
gcctattgcaggaatgaggagaaacctgtgcaaatgatgtttaagcaatctacttttaag
aagacctatataggagaaatatttacccaaatcttggtgcttccatatgttggcaaggaa
ctgaatatgatcatcatgcttccggacgagaccactgacttgagaacggtggagaaagaa
ctcacttacgagaagttcgtagaatggacgaggctggacatgatggatgaagaggaggtg
gaagtgtccctcccgcggtttaaactagaggaaagctacgacatggagagtgtcctgcgc
aacctgggcatgactgatgccttcgagctgggcaaggcagacttctctggaatgtcccag
acagacctgtctctgtccaaggtcgtgcacaagtcttttgtggaggtcaatgaggaaggc
acggaggctgcagccgccacagctgccatcatgatgatgcggtgtgccagattcgtcccc
cgcttctgcgccgaccaccccttccttttcttcatccagcacagcaagaccaacgggatt
ctcttctgcggccgcttttcctctccaaataaagtgacaattttcgcagtgagcgctaca
gctcataaaggcaacgcagacgccaaatgcaaacgaacaaaccttatcacagcacagaaa
accccaacgggttaccactacaagctccggcagcctgcttttattcttttatctggcccc
acccacatcctgctgattgggtgcacatgggtgatccagccactctcacatggaagcata
cctcctggacctgccccaagtgatgtgtcgactggccccaaatcaacacctccaactcaa
gtttccacgtgggatttgggcttcatatttgatgtctatgccaaggctgccctggacagc
tccctagcctag

>gi568815592f:2910023_3119652|GENSCAN_predicted_peptide_2|419_aa
MAPRSRMNRESDRLRPERLLPGESPPLCNQPAAAEGAWVPSAEPAAHDALAYIKICIYGN
VTGSPGYPKKGCFLLRGEANARNRKGVCQAVQAVFNGYGIGRSEINLACVSECAVQCGRN
LAQLLERSLGRRGSQSCGSYWGVRWSEDNPFPDPPFWLTLLLDSLKRDYAGKPQPPIKSE
RRNPPSYAMAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNLEPRAT
DKDITGTLSNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAI
LKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPL
QHGTLHFCGFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ

>gi568815592f:2910023_3119652|GENSCAN_predicted_CDS_2|1260_bp
atggcgccgcgctcccggatgaacagagaaagcgacaggctgcgcccggagcgcctgctg
cctggcgagagcccgcccctctgcaaccagcccgctgcagcggagggcgcctgggtgccc
tcggccgagccagcagcccacgacgcccttgcatacattaagatatgtatatatggaaat
gttaccgggagtcccggttatcccaaaaagggttgtttcctgttgcgtggtgaggccaat
gcacgaaaccgaaagggagtgtgtcaagcagtgcaggctgtattcaatggctatggaatt
ggaagatctgaaatcaacttagcttgcgtcagcgagtgcgcggtccagtgcggccggaac
ctggcgcaactcctagagcggtccttggggagacgcgggtcccagtcctgcggctcctac
tggggagtgcgctggtcggaagataatccctttccagacccgccattttggctcacccta
ttgctggactcgctgaagagagactacgcaggaaagccccagccacccatcaaatcagag
agaaggaatccaccttcttacgctatggcaggtaagaaagtactcattgtctatgcacac
caggaacccaagtctttcaacggatccttgaagaatgtggctgtagatgaactgagcagg
cagggctgcaccgtcacagtgtctgatttgtatgccatgaaccttgagccgagggccaca
gacaaagatatcactggtactctttctaatcctgaggttttcaattatggagtggaaacc
cacgaagcctacaagcaaaggtctctggctagcgacatcactgatgagcagaaaaaggtt
cgggaggctgacctagtgatatttcagttcccgctgtactggttcagcgtgccagccatc
ctgaagggctggatggatagggtgctgtgccagggctttgcctttgacatcccaggattc
tacgattccggtttgctccagggtaaactagcgctcctttccgtaaccacgggaggcacg
gccgagatgtacacgaagacaggagtcaatggagattctcgatacttcctgtggccactc
cagcatggcacattacacttctgtggatttaaagtccttgcccctcagatcagctttgct
cctgaaattgcatccgaagaagaaagaaaggggatggtggctgcgtggtcccagaggctg
cagaccatctggaaggaagagcccatcccctgcacagcccactggcacttcgggcaataa

>gi568815592f:2910023_3119652|GENSCAN_predicted_peptide_3|200_aa
MAGCRSRALPRGKAAKARREIERSARGLALLGDPVHPPQPLARTEELKVKFYRDNQGHLK
GDRLCDHWKREAVDLAFMHLDEDDTGNCTLQVEVAKYQRNGKYEASGRKCANHRKAPSLR
QKRPRRSPSKRRDTSELSSSNTFHPVDFEDGQRRPSRRVKFGPTRRLIVFDRHPAGEPVS
WRNAGAAAHCIQTFDGRWFE

>gi568815592f:2910023_3119652|GENSCAN_predicted_CDS_3|603_bp
atggcgggctgcaggtcccgagccctgccccgcgggaaggcagctaaagcccggcgagaa
atcgagcgcagcgcccgtgggctggcactgctgggggacccagtacatcctccgcagccg
ctggcccggacagaagaacttaaggtcaagttttacagagataaccaaggacatcttaaa
ggagacaggctgtgcgatcattggaagagggaagctgtggatcttgcattcatgcatttg
gatgaagatgacactggaaactgcacgttgcaggttgaggtggccaagtatcaacggaat
gggaaatatgaggcttcaggaaggaagtgcgcgaaccacaggaaggctccgtctctacgg
cagaagcggccacgccgcagcccatccaaacgccgcgacacgagtgagttgtcctcatcg
aacacatttcatcctgtggattttgaggatggccagagaagaccttcaaggagagtcaag
tttggaccaactcggaggctcattgtctttgacagacacccagctggtgaacctgtgtcc
tggaggaatgcaggagcagctgctcattgtattcaaacctttgatggaaggtggtttgaa
tga

>gi568815592f:2910023_3119652|GENSCAN_predicted_peptide_4|871_aa
MVELQQLRVQEVVDSMVKSLERENIWKTQGLMFWCSASCCEDSQAFTQQVHQCIECCPVP
LAQVQALVTSELEKFQDHLARCTMHCNDKAKDSIDAGSKELQVKQQLDGCVTNPEKGSGK
KCAKLGQRYYGRVLELILPVASACPGSKDLLCNKPEPSNIPDSSYYTGGLISGQVLGPQD
RYEWNFVLFGDGTGGGQETINKPAKKAPQNSRWRYPGYRMRVCSATKRMSHWYSTPISLL
DLPGSYADQTSHRTPFSQSRIQSKAPTLFNPMQDERSEEIAEEKLEASRDALFLRAEALD
AAGSQPTSLGCQVLNPVLKRPWRRGAGAGGGGSANSPRPPAGRARRGRRASCRSAATPGD
PQLGRQSAAIRAGPTERGRTWLDGAATEKGAGTALPGGEKVVPFWAFLSFRMQPDMSLNV
IKMKSSDFLESAELDSGGFGKVSLCFHRTQGLMIMKTVYKGPNCIEHNEALLEEAKMMNR
LRHSRVVKLLGVIIEEGKYSLVMEYMEKGNLMHVLKAEMSTPLSVKGRIILEIIEGMCYL
HGKGVIHKDLKPENILVDNDFHIKMWSKLNNEEHNELREVDGTAKKNGGTLYYMAPEHLN
DVNAKPTEKSDVYSFAVVLWAIFANKEPYENAICEQQLIMCIKSGNRPDVDDITEYCPRE
IISLMKLCWEANPEARPTFPVGTIQKQPNGRDVQGIEEKFRPFYLSQLEESVEEDVKSLK
RAYLPHLVTAERLPAAPRNRRAPTCRTSEPQSAYLPHLGTAERLPAAPRNRRAPTCRTSE
PQSAYLPHLGTAERLPAAPRNRRAPTCRTSEPQRAYLPHLGTAARLPAAPRNRSAPTCRT
SEPQRAYLPHLGTAARLPAAPSNRSAPTCRT

>gi568815592f:2910023_3119652|GENSCAN_predicted_CDS_4|2616_bp
atggtggagctgcagcagctgcgggtgcaggaggtggtggactccatggtgaagagtctg
gaaagggagaacatctggaagacacagggtctcatgttctggtgcagcgccagctgttgt
gaggacagccaggcattcacccagcaggtgcaccagtgcatcgagtgctgccctgtgcct
ctggctcaagtccaggccttggtcaccagtgagttggagaagttccaggaccacctggct
cggtgcaccatgcattgcaatgacaaagccaaagattcaatagatgctgggagtaaggag
cttcaggtgaagcagcagctggacggttgtgtgaccaatcctgaaaagggaagtggaaaa
aagtgtgctaaattgggtcagagatattacgggagagttttagagcttattcttcctgtg
gccagtgcttgtcctggaagtaaggatctcctctgtaacaagccagagccctccaacata
ccagactcttcttactacacaggagggctcatctctgggcaggtgctggggccacaagac
agatacgaatggaactttgtactcttcggggacggtacggggggcgggcaagaaacaata
aacaagccggcaaagaaagcgccacaaaattccaggtggcgatatccaggttacagaatg
agagtctgtagtgcgacaaaaagaatgagccactggtactccacacccatcagcctgctg
gatctcccggggagttacgctgatcaaaccagccacagaactcccttcagccaaagccga
atccagagcaaggccccaactctcttcaatcctatgcaggatgagagaagtgaggaaatt
gcagaagaaaagttggaagctagcagagacgccttgtttcttcgcgcggaggccctggac
gccgcaggctcccaacctacttctctgggctgtcaggttctgaacccggtcctgaagagg
ccctggcgccggggggccggggcagggggaggaggcagcgcgaacagtccacgccctcca
gccgggcgcgctcgacgcggacggcgggccagctgccggagcgcggcgactccaggggac
ccacagctggggcgccagagcgcggccatccgggcggggccgacggagcgcggcaggact
tggctggacggcgcggccacggagaagggcgcgggtacagctctgccggggggggaaaaa
gtggtaccattttgggcgttcttgagcttcagaatgcaaccagacatgtccttgaatgtc
attaagatgaaatccagtgacttcctggagagtgcagaactggacagcggaggctttggg
aaggtgtctctgtgtttccacagaacccagggactcatgatcatgaaaacagtgtacaag
gggcccaactgcattgagcacaacgaggccctcttggaggaggcgaagatgatgaacaga
ctgagacacagccgggtggtgaagctcctgggcgtcatcatagaggaagggaagtactcc
ctggtgatggagtacatggagaagggcaacctgatgcacgtgctgaaagccgagatgagt
actccgctttctgtaaaaggaaggataattttggaaatcattgaaggaatgtgctactta
catggaaaaggcgtgatacacaaggacctgaagcctgaaaatatccttgttgataatgac
ttccacattaagatgtggagcaaactgaataatgaagagcacaatgagctgagggaagtg
gacggcaccgctaagaagaatggcggcaccctctactacatggcgcccgagcacctgaat
gacgtcaacgcaaagcccacagagaagtcggatgtgtacagctttgctgtagtactctgg
gcgatatttgcaaataaggagccatatgaaaatgctatctgtgagcagcagttgataatg
tgcataaaatctgggaacaggccagatgtggatgacatcactgagtactgcccaagagaa
attatcagtctcatgaagctctgctgggaagcgaatccggaagctcggccgacatttcct
gtgggtacaattcagaaacagccaaatggaagagatgtacaaggcattgaagaaaaattt
aggcctttttatttaagtcaattagaagaaagtgtagaagaggacgtgaagagtttaaag
cgcgcctacctgccgcacctagtaaccgcagagcgcctacctgccgcacctcggaaccgc
agagcgcctacctgccgcacctcggaaccgcagagcgcctacctgccgcacctcggaacc
gcagagcgcctacctgccgcacctcggaaccgcagagcgcctacctgccgcacctcggaa
ccgcagagcgcctacctgccgcacctcggaaccgcagagcgcctacctgccgcacctcgg
aaccgcagagcgcctacctgccgcacctcggaaccgcagcgcgcctacctgccgcacctc
ggaaccgcagcgcgcctacctgccgcacctcggaaccgcagcgcgcctacctgccgcacc
tcggaaccgcagcgcgcctacctgccgcacctcggaaccgcagcgcgcctacctgccgca
cctagtaaccgcagcgcgcctacctgccgcacctag

>gi568815592f:2910023_3119652|GENSCAN_predicted_peptide_5|321_aa
MGPVEESWFAPSLEHPQEENEPSLQSKLQDEANYHLYGSRMDRQTKQQPRQNVAYNREEE
RRRRVSHDPFAQQRPYENFQNTEGKGTAYSSAASHGNAVHQPSGLTSQPQVLYQNNGLYS
SHGFGTRPLDPGTAGPRVWYRPIPSHMPSLHNIPVPETNYLGNTPTMPFSSLPPTDESIK
YTIYNSTGIQIGAYNYMEIGGTSSSLLDSTNTNFKEEPAAKYQAIFDNTTSLTDKHLDPI
RENLGKHWKNCARKLGFTQSQIDEIDHDYERDGLKEKVYQMLQKWVMREGIKGATVGKLA
QALHQCSRIDLLSSLIYVSQN

>gi568815592f:2910023_3119652|GENSCAN_predicted_CDS_5|966_bp
atgggtcctgtggaggagtcctggtttgctccttccctggagcacccacaagaagagaat
gagcccagcctgcagagtaaactccaagacgaagccaactaccatctttatggcagccgc
atggacaggcagacgaaacagcagcccagacagaatgtggcttacaacagagaggaggaa
aggagacgcagggtctcccatgacccttttgcacagcaaagaccttacgagaattttcag
aatacagagggaaaaggcactgcttattccagtgcagccagtcatggtaatgcagtgcac
cagccctcagggctcaccagccaacctcaagtactgtatcagaacaatggattatatagc
tcacatggctttggaacaagaccactggatccaggaacagcaggtcccagagtttggtac
aggccaattccaagtcatatgcctagtctgcataatatcccagtgcctgagaccaactat
ctaggaaatacacccaccatgccattcagctccttgccaccaacagatgaatctataaaa
tataccatatacaatagtactggcattcagattggagcctacaattatatggagattggt
gggacgagttcatcactactagacagcacaaatacgaacttcaaagaagagccagctgct
aagtaccaagctatctttgataataccactagtctgacggataaacacctggacccaatc
agggaaaatctgggaaagcactggaaaaactgtgcccgtaaactgggcttcacacagtct
cagattgatgaaattgaccatgactatgagcgagatggactgaaagaaaaggtttaccag
atgctccaaaagtgggtgatgagggaaggcataaagggagccacggtggggaagctggcc
caggcgctccaccagtgttccaggatcgaccttctgagcagcttgatttacgtcagccag
aactaa

>gi568815592f:2910023_3119652|GENSCAN_predicted_peptide_6|44_aa
MVAVLGGRGVLRLRLLLSALKPGIHVPRAGPAAAFGNQPEPEYR

>gi568815592f:2910023_3119652|GENSCAN_predicted_CDS_6|135_bp
atggtggctgtgctgggcggccggggcgtgttgcgcctgcggctgcttctctcagcgctg
aagcccgggatccacgtcccacgggccggacccgcggccgcgttcggaaatcagcctgag
cctgagtaccgctaa