GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:24:32

Sequence gi568815592f:118805650_119007611 : 201962 bp : 38.34% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.14 PlyA -   3113   3108    6                               1.05
 1.13 Term -  10645   9175 1471  0  1   96   33  1064 0.970  90.81
 1.12 Intr -  16518  16254  265  1  1   65   38   198 0.146   8.15
 1.11 Intr -  16908  16616  293  2  2  -19   71   188 0.455   2.25
 1.10 Intr -  20643  20498  146  0  2  116  100   155 0.888  17.66
 1.09 Intr -  21215  21133   83  0  2   65  110   125 0.998  10.84
 1.08 Intr -  22481  22278  204  0  0   44   21   238 0.996  10.95
 1.07 Intr -  23601  23399  203  2  2   80  102   249 0.966  23.51
 1.06 Intr -  33818  33680  139  0  1   52   72   128 0.486   6.20
 1.05 Intr -  34103  33924  180  0  0   28   43   145 0.601   2.92
 1.04 Intr -  41029  40848  182  0  2   86   47   108 0.951   5.09
 1.03 Intr -  50896  50722  175  2  1  107   86   150 0.988  14.78
 1.02 Intr -  55616  55537   80  1  2   76   88   120 0.358   9.08
 1.01 Init -  56576  56506   71  2  2  100    6    89 0.307   0.55
 1.00 Prom -  76111  76072   40                              -3.95

 2.00 Prom +  78893  78932   40                              -3.65
 2.01 Init +  88765  88873  109  0  1   51  113   136 0.541  12.83
 2.02 Intr +  95117  95232  116  0  2   79  110    78 0.987   8.35
 2.03 Intr + 100003 100179  177  0  0   80   90   145 0.999  13.09
 2.04 Term + 101753 101965  213  1  0   97   47   109 0.999   3.95
 2.05 PlyA + 103498 103503    6                               1.05

 3.28 PlyA - 103625 103620    6                               1.05
 3.27 Term - 105737 105679   59  0  2   82   43    45 0.725  -3.73
 3.26 Intr - 106120 106001  120  2  0   89   72    94 0.765   7.45
 3.25 Intr - 107771 107646  126  0  0  112   88    49 0.978   7.03
 3.24 Intr - 112112 111912  201  0  0   81   72   180 0.979  14.04
 3.23 Intr - 116437 116356   82  1  1   88   99    78 0.999   7.19
 3.22 Intr - 118458 118162  297  0  0   -2   99   235 0.410  11.75
 3.21 Intr - 122444 122273  172  1  1   52   60   172 0.788   9.82
 3.20 Intr - 126089 125851  239  2  2   94   82   148 0.552  10.29
 3.19 Intr - 127091 127060   32  0  2   72  107    24 0.622  -0.37
 3.18 Intr - 129195 129082  114  1  0   72   36   113 0.530   4.00
 3.17 Intr - 129338 129242   97  2  1   52  100    90 0.459   5.26
 3.16 Intr - 133990 133895   96  1  0   96   80    32 0.408   2.49
 3.15 Intr - 135050 134847  204  2  0  130    9    90 0.132   3.77
 3.14 Intr - 135221 135194   28  1  1   68   94     9 0.064  -3.30
 3.13 Intr - 139277 139155  123  1  0  101   74    43 0.106   2.98
 3.12 Intr - 156314 156112  203  2  2   60   78   159 0.783   9.26
 3.11 Intr - 159122 159018  105  2  0   37   95    80 0.891   3.09
 3.10 Intr - 161303 161186  118  1  1   93   50    86 0.984   4.85
 3.09 Intr - 168925 168779  147  0  0   22   91   153 0.990   7.43
 3.08 Intr - 169559 169375  185  2  2   80   91   151 0.999  12.26
 3.07 Intr - 170395 170268  128  2  2   62  111   179 0.977  17.08
 3.06 Intr - 173869 173716  154  1  1   89   -4   187 0.997   8.32
 3.05 Intr - 174683 174489  195  2  0   40   89   185 0.787  12.49
 3.04 Intr - 182471 182430   42  2  0   92  101    25 0.090   1.72
 3.03 Intr - 197400 197250  151  2  1   32   91   158 0.975   9.74
 3.02 Intr - 197973 197852  122  0  2   49   56   203 0.998  11.57
 3.01 Intr - 200959 200798  162  1  0   69   76   101 0.846   6.25

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  73450  73527   78  0  0   92   70    40 0.843   3.71
S.002 Term +  76246  76308   63  0  0   97   37    80 0.823   0.71
S.003 Init - 176920 176870   51  1  0   65   85    17 0.848   0.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:118805650_119007611|GENSCAN_predicted_peptide_1|1163_aa
MALDLGIPALLGAQEAPLPLKAWNSWCLRVFGHHRVPFVQMLVPAVEAAYGLTVTAVKDS
GEWNLEAGALVLADAGLCCIDEFNSLKEHDRTSIHEAMEQQTISVAKAGMFNIHCLPPSS
PDHQDSRRLLPLAGLLYLLRDPSHDCQLWSPELSGPSVYSPVVNDFDSQVSAGDTQANRV
WSGPPANASRPAAEGPVRRRDNKQKGIASTSTKRTSTHKPHPKVTNIKDSREQNWMENEF
DKLTEVGFRMWEITNSSELKEHVLTQCKEDKNLEKSLVCKLNTRTTILAATNPKGQYDPQ
ESVSVNIALGSPLLSRFDLILVLLDTKNEDWDRIISSFILENKGYPSKSEKLWSMEKMKT
YFCLIRNLQPTLSDVGNQVLLRYYQMQRQSDCRNAARTTIRLLESLIRLAEAHARLMFRD
TVTLEDAITVVSVMESSMQGGALLGGVNALHTSFPENPGEQYQRQCELILEKLELQSLLS
EELRRLERVQQTLHVGELCWHQAGAPLGQSFQRKEQAAIFAVLHPPLVIPQANRVWSGPL
ANCSRLVEEGPIRRKTSKQKAKTTTSTKRAPTQKPHPKVISSKIKARAQNWTENEIDELT
EVGFRRWVITNSSKLKEHVLTQCKEAKNLDKRLQELLTGITSLERSVNYLMELKNTAREL
HEAYTSISTQINQALQNQSVHQSQPRVLEVETTPGSLRNGPGEESNFRTSSQQEINYSTH
IFSPGGSPEGSPVLDPPPHLEPNRSTSRKHSAQHKNNRDDSLDWFDFMATHQSEPKNTVV
VSPHPKTSGENMASKISNSTSQGKEKSEPGQRSKVDIGLLPSPGETGVPWRADNVESNKK
KRLALDSEAAVSADKPDSVLTHHVPRNLQKLCKERAQKLCRNSTRVPAQCTVPSHPQSTP
VHSPDRMLDSPKRKRPKSLAQVEEPAIENVKPPGSPVAKLAKFTFKQKSKLIHSFEDHSH
VSPGATKIAVHSPKISQRRTRRDAALPVKRPGKLTSTPGNQISSQPQGETKEVSQQPPEK
HGPREKVMCAPEKRIIQPELELGNETGCAHLTCEGDKKEEVSGSNKSGKVHACTLARLAN
FCFTPPSESKSKSPPPERKNRGERGPSSPPTTTAPMRVSKRKSFQLRGSTEKLIVSKESL
FTLPELGDEAFDCDWDEEMRKKS

>gi568815592f:118805650_119007611|GENSCAN_predicted_CDS_1|3492_bp
atggctctggacctaggcatccctgcactcttgggggcccaggaagccccccttcccctg
aaggcttggaattcctggtgtctccgagtttttgggcaccatcgtgttccctttgttcag
atgctggtgcctgcagtagaagctgcttatggtctgacggtaactgctgtaaaagactca
ggagaatggaatttggaggctggggcattagttcttgcagatgcgggcctttgctgtatt
gatgagttcaatagcctcaaagagcatgataggaccagtatccatgaagcaatggagcaa
caaaccataagtgttgctaaggctgggatgtttaatatccactgcttgcctccttcttca
cctgatcaccaagactccaggcgactcttgccccttgccggtctcctctatctactccgg
gatccttcccatgactgccagctctggtccccggaactttcaggcccctctgtctattct
ccagtagtcaatgactttgattcacaagtctctgctggtgatacccaggcaaacagggtc
tggagtggacctccagcaaacgccagcagacctgcagcagaggggcctgttagaaggaga
gataacaaacagaaaggaatagcatcaacatcaacaaaaaggacgtccacacataaaccc
catccgaaggtcaccaacatcaaagactcaagggaacaaaactggatggagaatgagttt
gataaattgacagaagtaggcttcagaatgtgggaaataacaaactcctctgagctaaag
gagcatgttctaacccagtgcaaggaagataagaaccttgaaaaaagcctcgtgtgcaag
ctgaacacaaggaccaccatcctggcagcaacgaaccccaaaggccagtacgacccccag
gagtccgtgtctgtgaacattgccctcggcagcccactcttaagtcgatttgacctgatc
ctggttttgcttgataccaagaatgaagactgggatcgtatcatttcctcctttatctta
gaaaataaaggttacccaagcaaatcagagaagctctggagcatggaaaagatgaaaacc
tatttctgcctcataaggaatctgcagcccacactgtctgatgtgggcaatcaggttctt
ctccggtactaccagatgcaaaggcagagtgattgccggaacgctgcccggaccaccatt
cggctgttggaaagcttgatacgattagcagaagctcatgctcgcctgatgtttcgtgat
actgtaactctggaagacgctattacggtggtgtcagtcatggagtcctcaatgcaggga
ggtgcactgctaggaggtgtgaatgccctccacacttcctttcctgaaaaccctggagag
cagtaccagagacagtgtgaacttattctggaaaagctagagctgcagagcctcttgagt
gaagagcttagaagacttgaaagggttcagcagacacttcatgtaggagagctctgctgg
catcaggctggtgcccctctgggacaaagcttccagaggaaggagcaggcagcaatcttt
gctgttctgcaccctccactggtgataccccaggcaaacagggtctggagtggacctcta
gcaaactgcagcagacttgtggaagaggggcctattagaagaaaaactagcaaacagaaa
gcaaaaacaacaacatcaacaaaaagggcccccacacaaaaaccccatcctaaggtcatc
agctcaaagatcaaagcaagggcacaaaactggacagagaatgagattgacgaattgaca
gaagtaggcttcagaaggtgggtaataacaaactcctccaagctaaaggagcatgttcta
acccaatgcaaggaagctaagaaccttgataaaagattacaggaactgctaactggaata
accagtttagaaagaagcgtaaattacctgatggagctgaaaaacacagcacgagaactt
catgaagcatacacaagtatcagtactcaaatcaatcaagcgttacagaatcagagtgtg
caccaatcccaaccacgggtattggaggtagagactactccaggatccttgagaaatggt
ccaggggaagaatcaaacttcagaacttcatcacagcaggaaatcaactatagcacacat
atcttctctcctggaggcagccccgagggaagcccagttctagatcccccaccgcatctg
gagcctaatagatcaacaagtaggaaacattcagctcagcacaaaaataacagagatgac
agtttagattggtttgatttcatggcaactcatcagagtgaacctaaaaacactgttgtt
gtgtctcctcatcccaaaacatctggagaaaatatggcttcgaagatctctaacagcaca
tctcagggtaaggagaagagtgagccaggccaaaggagcaaagtggacattgggttgctt
ccatcaccaggagagacaggtgttccatggagggcagacaatgtggaaagtaacaagaaa
aaaaggctagcactagattctgaagcagcagtctctgctgataaaccagactcagtactg
actcatcatgtccccaggaacctgcagaagctgtgcaaagagagggcccagaagttgtgc
agaaatagcaccagggtgcctgcacagtgcacagtcccttcccatcctcagtccactcct
gtacatagcccagacagaatgctggactcacccaaaagaaagagaccgaaatcccttgcg
caagtggaagagcctgcaattgaaaatgttaagcctccaggttcccctgtggccaaactg
gcaaaatttactttcaagcagaagtcaaaactgatccactcctttgaagatcacagccat
gtgtcacctggtgcaactaaaatagcagttcatagtcctaaaatttcccagcgtagaaca
agaagagacgcagccttgccggtgaagcgtccaggaaagttaacatctaccccaggaaac
cagatctccagtcagccacagggtgagacaaaggaggtgtcgcagcagccaccagagaaa
cacggaccaagagagaaggtgatgtgtgcccctgagaagaggattattcagcctgaatta
gagcttgggaacgagactgggtgtgctcatcttacttgtgagggagacaaaaaggaagag
gtttcaggcagtaataaaagcggcaaggttcatgcctgcacattagccagattggcaaac
ttctgctttactcccccatcggaatccaaatcaaaatcccctcctcctgaaaggaagaac
cgaggtgagagaggcccaagctcccctcctacaaccacagctccaatgcgtgtcagtaaa
aggaaatcttttcagctccgtgggtccaccgagaaactgattgtttccaaagaatccctc
ttcactttaccagaactaggtgatgaagcatttgattgtgactgggatgaagagatgaga
aaaaagtcatag

>gi568815592f:118805650_119007611|GENSCAN_predicted_peptide_2|204_aa
MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSV
LVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTET
ELRENPPVKPDFSKLQRNILASNPRVTRFHINWEDNTEKLEDAESSNPNLQSLLSTDALP
SASKGWSTSENSLNVMLESHMDCM

>gi568815592f:118805650_119007611|GENSCAN_predicted_CDS_2|615_bp
atggcaaaggttcaggtgaacaatgtagtggtgctggataacccttctcctttctacaac
ccgttccagttcgagatcaccttcgagtgcatcgaggacctgtctgaagacttggaatgg
aaaattatctatgtgggctctgcagaaagtgaagaatacgatcaagttttagactctgtt
ttagtgggtcctgttcccgcaggaaggcatatgtttgtatttcaggctgatgcacctaat
ccaggactcattccagatgcagatgcagtaggcgtaactgttgtgctaattacttgtacc
tatcgaggacaagaatttattagagttggctattatgtaaataatgaatatactgagaca
gaattaagggaaaatccaccagtaaaaccagacttttctaagcttcaaaggaatattttg
gcatctaatcccagggtcacaagattccacattaattgggaagataacacagaaaaactg
gaagatgcagagagcagtaatccaaatctacagtcacttctttcaacagatgcattacct
tcagcatcaaagggatggtccacatcagaaaactcactaaatgtcatgttagaatcccac
atggactgcatgtga

>gi568815592f:118805650_119007611|GENSCAN_predicted_peptide_3|1233_aa
IGHLQDMVRKSEQGLGSAEGLIASLQDSQERLQNELDLTKDSLKETKDALLNVEGELEQE
RQQHEETIAAMKEEEKLKVDKMAHDLEIKWTENLRQECSKLREELRLQHEEDKKSAMSQL
LQLKDREKNAARDSWQKKVEDLLNQRQSLGEALHKSISNNLEIQLSQSQTSLQQLQAQFT
QERQRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQKHSAELQS
LKDAHRESMEGFRIEMEQELQTLRFELEDEGKAMLASLRSELNHQHAAAIDLLRHNHHQE
LAAAKMELERSIDISRRQSKEHICRITDLQEELRHREHHISELDKEVQHLHENISALTKE
LEFKGKEILRIRSESNQQIRLHEQDLNKRLEKELDVMTADHLREKNIMRADFNKTNELLK
EINAALQVSLEEMEEKYLMRESKPEDIQMITELKAMLTERDQIIKKLIEDNKFYQLELVN
RETNFNKVFNSSPTVGVINPLAKQKKKNDKSPTNRFVSVPNLSALESGGVGNGHPNRLDP
IPNSPVHDIEFNSSKPLPQPVPPKGPKTFLRSSHPAGLSGFRLVLENVYKESCDVTYYWS
VQVFDFFMAQYWVSTSSLKPQAKEPHSVATTTTFPQVVLPGYHQCSPMAKGLLSQLAVNA
DRPEVNPSGQWALLCLLDSSDSPASGLGRGSTHFNVKSHNLYAIPLPSAQILSPHHVDTA
QPSCAGDEPAAWLELSGPFGLGSNAFPATSDTAIRPKSRSRLITSKTIQLRDRTGTGAAR
EKSPRSLRDCQAVSAEPSRFPTLPRFKMNSDQVTLVGQVFESYVSEYHKNDILLILKERD
EDAHYPVVVNAMTLFETNMEIGEYFNMFPSEVLTIFDSALRSVGIFEEQSEEESTETKGA
LYVKKCAEVLIEQEASHKRPYSPVQIWYLILRSVASHGRLVREHIPKTKDVGHFLSVTGT
VIRTSLVKVLEFERDYMCNKCKHVFVIKADFEQYYTFCRPSSCPSLESCDSSKFTCLSGL
SSSPTRCRDYQEIKIQEQVQRLSVGSIPRSMKVILEDDLVDSCKSGDDLTIYGIVMQRWK
PFQQDVRCEVEIVLKANYIQVNNEQSSGIIMDEEVQKEFEDFWEYYKSDPFAGRNVILAS
LCPQVFGMYLVKLAVAMVLAGGIQRTDATGTRVRGESHLLLVGDPGTGKSQFLKYAAKIT
PRSVLTTGIGSTSAGKSPYHLAFYQDSATGMLN

>gi568815592f:118805650_119007611|GENSCAN_predicted_CDS_3|3702_bp
attggccacctccaagatatggtaaggaaaagtgaacaaggtcttggctctgcagaagga
cttattgctagtcttcaggactcccaggaaaggcttcagaatgagcttgacttgactaaa
gacagcctaaaggagaccaaggatgctctattaaatgtggagggtgagctagaacaagaa
aggcaacagcatgaagaaacaattgctgccatgaaagaagaagagaagctcaaagtggac
aaaatggcccatgacttagaaattaagtggactgaaaatcttagacaagagtgttctaaa
cttcgtgaagagttaaggcttcaacatgaagaggataagaagtcagcaatgtctcaactt
ttgcagttgaaagatcgagagaaaaatgcagcaagagattcatggcagaagaaagtagaa
gatctcttaaaccagcggcagtctctgggtgaagctttgcataaatctatcagcaataat
ctggagatacagctttcccagtctcagacttctttgcaacaactgcaagcccagtttacg
caagaacgacagcggcttacgcaagagcttgaagaattagaggagcaacatcagcaaaga
cacaaatcattaaaagaagcacatgtccttgcatttcaaactatggaagaggaaaaggaa
aaggagcaaagagctcttgaaaatcatttacaacagaagcattctgcagagcttcaatca
ctaaaagatgcacacagagagtcaatggagggcttccggatagaaatggaacaggaactt
cagactcttcggtttgaattagaagatgaaggaaaggctatgcttgcttccttgcgctca
gaactcaaccatcaacatgcagctgcaattgatttgttacggcataatcatcatcaagaa
ttggcagctgctaaaatggaattagagagaagcatagacatcagcagaagacagagtaag
gagcacatatgtagaattacagatctacaagaggaattaagacacagagagcatcacatc
tctgaattggataaggaggttcagcaccttcatgagaatataagtgccctaaccaaagaa
ctggaatttaaggggaaagaaattctcagaatacgaagtgaatctaaccaacagataagg
ttgcatgaacaagatttaaacaagagacttgaaaaagagttggatgtcatgacagcagac
cacctcagagagaaaaatatcatgcgggcagattttaataagactaacgagctactcaag
gaaataaatgccgctttacaagtgtcattagaagaaatggaagaaaaatatctaatgaga
gaatcaaaaccagaagatatacagatgattacagaattaaaagccatgcttacagaaaga
gaccagatcataaagaaactaattgaggataataagttttatcagctggaattagtcaat
cgagaaactaacttcaacaaagtgtttaactcaagtcctactgttggtgttattaatcca
ttggctaagcaaaagaagaagaatgataaatcaccaacaaacaggtttgtgagtgttccc
aatctaagtgctctggaatctggtggagtgggcaatggacatcctaaccgcctggatccc
attcctaattctccagtccacgatattgagttcaacagcagcaaaccacttccacagcca
gtgccacctaaagggcccaagacatttttgaggtctagccacccagcagggctatcaggc
ttcagactggtgctagaaaatgtctataaagagtcctgtgatgtgacttattattggtct
gttcaggttttcgatttcttcatggctcaatattgggtatcgacaagttccctcaagccc
caggcaaaggagcctcactctgtggctaccaccactacattcccacaggtagtactgcca
ggctaccaccaatgttcacctatggccaaaggtctcctcagtcagcttgcagtgaatgct
gacaggcctgaggttaacccttcagggcagtgggctctcctctgcctgctggattcaagt
gattctcctgcctctggcttagggcggggaagcactcacttcaacgtaaagtcccataat
ctctatgctatccctctcccaagtgcacagattctctctccacaccatgtggacactgcc
cagccttcttgcgccggagacgaacccgctgcctggctggagctctctgggcccttcggc
ctcgggagcaacgcgttcccggcgacttctgacacagccattcgtcccaagtctcgttcc
cgtctcattacttcaaaaactattcaactccgggaccggacaggcacgggagctgcccgg
gagaagagccccagaagtctcagagactgccaagctgtttctgcagaacccagtagattt
cctacgttacctagattcaagatgaatagcgatcaagttacactggttggtcaagtgttt
gagtcatatgtttcggaataccataagaatgatattcttctaatcttgaaggaaagggat
gaagatgctcattacccagttgtggttaatgccatgactctgtttgagaccaacatggaa
atcggggaatatttcaacatgttccccagtgaagtgcttacaatttttgatagtgcactg
cgaagtgtgggcatttttgaggagcagagtgaagaggagagcactgagacaaagggagca
ctgtatgtgaaaaagtgcgcagaagtcttgatagaacaggaagccagtcacaaaaggccc
tatagtccagtccagatttggtaccttattcttagatctgtggcaagccatggaaggctg
gtgagggaacacatacctaaaaccaaggatgtgggacactttttatctgtcactgggaca
gtgattcgaacaagtctggtgaaggttctggagtttgagcgggattacatgtgtaacaaa
tgcaagcatgtgtttgtgatcaaggctgactttgagcagtattacaccttttgccggcca
tcctcgtgtcccagcttggagagctgtgattcctctaaattcacttgcctctcaggcttg
tcttcgtctccaaccaggtgtagagattaccaggaaatcaaaattcaggaacaggttcaa
aggctatctgttggaagtattccacgatctatgaaggttattctggaagatgacttagtg
gatagttgcaaatctggtgatgacctcactatttacgggattgtaatgcaacggtggaag
ccctttcagcaagatgtgcgctgtgaagtggagatagtcctgaaagcaaattacatccaa
gtaaataatgagcagtcctcagggatcatcatggatgaggaggtccaaaaggaattcgaa
gatttttgggaatactataagagcgatccctttgcaggaaggaatgtaatattggctagc
ttgtgccctcaagtgtttggaatgtatctagtaaagcttgctgtggccatggtgctggct
ggtgggattcaaaggactgatgctacaggaacacgggtcagaggagaatctcatctttta
ttggttggggatcctggcacagggaaatctcagttcctcaaatatgcagcaaagattaca
ccaagatctgtgctgaccacaggaattggatctactagtgcaggaaaaagtccgtatcat
ctggcattttatcaagactcagcaactggaatgttaaactaa