GENSCAN 1.0	Date run:  6-Nov-116	Time: 01:33:59

Sequence gi568815587r:47472933_47678074 : 205142 bp : 45.73% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.14 Intr -    299    156  144  0  0   42   76   168 0.946  11.25
 1.13 Intr -   2589   2404  186  1  0   61  113   188 0.964  18.26
 1.12 Intr -   4024   3914  111  2  0   63  110    41 0.588   4.15
 1.11 Intr -   4493   4365  129  0  0   72  115    52 0.990   6.97
 1.10 Intr -   6020   5945   76  2  1   58  107    36 0.681   1.59
 1.09 Intr -   9924   9763  162  0  0   91   73   111 0.962  10.07
 1.08 Intr -  10600  10521   80  2  2  111   75    70 0.999   7.27
 1.07 Intr -  11591  11457  135  0  0   53   92   158 0.685  13.24
 1.06 Intr -  13866  13818   49  0  1  112  103    45 0.983   6.65
 1.05 Intr -  14309  14227   83  0  2   72   78    39 0.953   0.66
 1.04 Intr -  16092  15905  188  2  2   34   72   228 0.035  15.13
 1.03 Intr -  76727  76669   59  2  2   94  103    17 0.076   1.48
 1.02 Intr -  80225  80060  166  1  1   79  105   123 0.187  13.06
 1.01 Init -  84886  84879    8  1  2   51   95     0 0.092  -2.57
 1.00 Prom -  85510  85471   40                              -5.56

 2.00 Prom +  90763  90802   40                              -5.16
 2.01 Init +  92691  92864  174  2  0  102   99   392 0.999  39.05
 2.02 Intr +  92974  93054   81  0  0   85   94   170 0.998  17.13
 2.03 Intr +  96768  96959  192  2  0   54   81   116 0.981   7.19
 2.04 Term +  98539  98697  159  0  0  103   41   173 0.999  12.04
 2.05 PlyA +  99027  99032    6                              -0.45

 3.04 PlyA -  99284  99279    6                               1.05
 3.03 Term - 100858  99998  861  1  0   62   48   728 0.947  58.93
 3.02 Intr - 102767 102661  107  0  2  109  116    18 0.846   6.63
 3.01 Init - 105067 104479  589  1  1   73  114   745 0.628  70.99
 3.00 Prom - 105408 105369   40                             -10.45

 4.00 Prom + 105460 105499   40                              -6.76
 4.01 Init + 106160 106226   67  1  1   88   72   150 0.996  12.64
 4.02 Intr + 106337 106402   66  0  0   92   78    34 0.759   1.68
 4.03 Intr + 107593 107690   98  2  2   96   90   124 0.995  13.13
 4.04 Intr + 107903 108052  150  1  0   98   78    98 0.999  10.16
 4.05 Intr + 109156 109281  126  0  0  120  105   233 0.998  29.08
 4.06 Intr + 109417 109536  120  0  0   69   75   100 0.990   7.49
 4.07 Term + 111382 111549  168  0  0   91   36   243 0.999  17.28
 4.08 PlyA + 111609 111614    6                               1.05

 5.00 Prom + 112308 112347   40                             -15.35
 5.01 Init + 113837 113921   85  1  1   72   81   101 0.716   6.96
 5.02 Intr + 114819 114917   99  1  0  107   35    61 0.804   2.78
 5.03 Term + 115072 115502  431  2  2  120   46   294 0.867  23.86
 5.04 PlyA + 116243 116248    6                              -3.44

 6.02 PlyA - 116775 116770    6                               1.05
 6.01 Sngl - 117878 116889  990  2  0   98   52  2258 0.999 218.07
 6.00 Prom - 120004 119965   40                              -6.76

 7.08 PlyA - 120260 120255    6                              -0.45
 7.07 Term - 120356 120336   21  2  0   74   54     6 0.166  -5.89
 7.06 Intr - 121399 121216  184  0  1   54   94   127 0.109   9.69
 7.05 Intr - 126421 126368   54  0  0  109   93    11 0.131   1.79
 7.04 Intr - 152809 152742   68  1  2   84   94    44 0.387   2.30
 7.03 Intr - 161802 161740   63  0  0   51   94    44 0.347   0.21
 7.02 Intr - 162639 162613   27  0  0  110   87    38 0.755   4.21
 7.01 Init - 169533 169447   87  0  0  117   80   200 0.999  20.74
 7.00 Prom - 181014 180975   40                              -4.16

 8.04 PlyA - 182598 182593    6                               1.05
 8.03 Term - 183719 183483  237  2  0   89   54    30 0.049  -4.13
 8.02 Intr - 195975 195909   67  2  1   69   99    24 0.246   0.51
 8.01 Intr - 204469 204339  131  1  2   59   92   125 0.765   9.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  16082  15905  178  2  1   56   72   220 0.959  16.62


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:47472933_47678074|GENSCAN_predicted_peptide_1|526_aa
MCLCRKCRHFGVFCSGGSGSGGGTRRLPRDSASAARRRRRLRRRRQQLRQRQAQVQPLPL
VTTIISVSTNLTTLDNIISKKMNGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQY
GAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADS
EKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRA
MAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRMAQQLQQQMQQISAASVWGNLAG
LNTLGPQYLALYLQLLQQTASSGNLNTLSSLHPMGGLNAMQLQNLAALAAAASAAQNTPS
GTNALTTSSSPLSVLTSSGSSPSSSSSNSVNPIASLGALQTLAGATAGLNVGSLAGMAAL
NGGLGSSGLSNGTGSTMEALTQAYSGIQQYAAAALPTLYNQNLLTQQSIGAAGSQKEGPE
GANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFX

>gi568815587r:47472933_47678074|GENSCAN_predicted_CDS_1|1578_bp
atgtgcctgtgccggaagtgccgccattttggggtgttctgctctggcggcagcggcagc
ggcggcgggacgcggaggctcccccgggattcggcctcagcagcgaggcggcggcggcgg
ctgcggaggcgcaggcagcaactgaggcagcggcaggctcaggtgcagccgctgcccctg
gtaaccaccattatttctgtttctaccaatttgactactttagataacatcatctcaaag
aaaatgaacggcaccctggaccacccagaccaaccagatcttgatgctatcaagatgttt
gtgggccaggttccaaggacctggtctgaaaaggacttgcgggaactcttcgaacagtat
ggtgctgtgtatgaaatcaacgtcctaagggataggagccaaaacccgcctcagagcaaa
gggtgctgttttgttacattttacacccgtaaagctgcattagaagctcagaatgctctt
cacaacatgaaagtcctcccagggatgcatcaccctatacagatgaaacctgctgacagt
gagaagaacaatgcagtggaagacaggaagctgtttattggtatgatttccaagaagtgc
actgaaaatgacatccgagtcatgttctcttcgtttggacagattgaagaatgccggata
ttgcggggacctgatggcctgagccgaggttgtgcatttgtgacttttacaacaagagcc
atggcacagacggctatcaaggcaatgcaccaagcacagaccatggagggttgctcatca
cccatggtggtaaaatttgctgatacacagaaggacaaagaacagaagagaatggcccag
cagctccagcagcagatgcagcaaatcagcgcagcatctgtgtggggaaaccttgctggt
ctaaatactcttggaccccagtatttagcactttatttgcagctccttcagcagactgcc
tcctctgggaacctcaacaccctgagcagcctccacccaatgggagggttgaatgcaatg
cagttacagaatttggctgcactagctgctgcagctagtgcagctcagaacacaccaagt
ggtaccaatgctctcactacatccagcagtcccctcagcgtgctcactagttcagggtcc
tcacctagctctagcagcagtaattctgtcaaccccatagcctcacttggagccctgcag
acattagctggagcaacggctggcctcaatgttggctctttggcaggaatggctgcttta
aatggtggcctgggcagcagtggcctttccaatggcaccgggagcaccatggaggccctc
actcaggcctactcgggtatccagcaatatgctgctgctgcgctccccactctgtacaac
cagaatcttctgacacagcagagtattggtgctgctggaagccagaaggaaggtccagag
ggagccaacctgttcatctaccacctgccccaggagtttggtgatcaggacctgctgcag
atgtttatgccctttgggaatgtcgtgtctgccaaggttttcatagacaagcagacaaac
ctgagcaagtgttttgnn

>gi568815587r:47472933_47678074|GENSCAN_predicted_peptide_2|201_aa
MAATALLEAGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLV
QDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALK
YQSLGQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLK
EFHKQITARATKDGTFVISKT

>gi568815587r:47472933_47678074|GENSCAN_predicted_CDS_2|606_bp
atggcggccaccgcgctgctggaggccggcctggcgcgggtgctcttctacccgacgctg
ctctacaccctgttccgcgggaaggtgccgggtcgggcgcaccgggactggtaccaccgc
atcgaccccaccgtgctgctgggcgcgctgccgttgcggagcttgacgcgccagctggta
caggacgagaacgtgcgcggggtgatcaccatgaacgaggagtacgagacgaggttcctg
tgcaactcttcacaggagtggaagagactaggagtcgagcagctgcggctcagcacagta
gacatgactgggatccccaccttggacaacctccagaagggagtccaatttgctctcaag
taccagtcgctgggccagtgtgtttacgtgcattgtaaggctgggcgctccaggagtgcc
actatggtggcagcatacctgattcaggtgcacaaatggagtccagaggaggctgtaaga
gccatcgccaagatccggtcatacatccacatcaggcctggccagctggatgttcttaaa
gagttccacaagcagattactgcacgggcaacaaaggatgggacttttgtcatttcaaag
acatga

>gi568815587r:47472933_47678074|GENSCAN_predicted_peptide_3|518_aa
MESPEEPGASMDENYFVNYTFKDRSHSGRVAQGIMKLCLEEELFADVTISVEGREFQLHR
LVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAEELQEIYE
VSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNT
EEFLHLPHRLLTDIISDGVPCSQNPTEAIEAWINFNKEEREAFAESLRTSLKEIGENVHI
YLIGKESSRTHSLAVSLHCAEDDSISVSGQNSLCHQITAACKHGGDLYVVGGSIPRRMWK
CNNATVDWEWCAPLPRDRLQHTLVSVPGKDAIYSLGGKTLQDTLSNAVIYYRVGDNVWTE
TTQLEVAVSGAAGANLNGIIYLLGGEENDLDFFTKPSRLIQCFDTETDKCHVKPYVLPFA
GRMHAAVHKDLVFIVAEGDSLVCYNPLLDSFTRLCLPEAWSSAPSLWKIASCNGSIYVFR
DRYKKGDANTYKLDPATSAVTVTRGIKVLLTNLQFVLA

>gi568815587r:47472933_47678074|GENSCAN_predicted_CDS_3|1557_bp
atggaatcaccagaggagcctggagcatccatggatgagaactactttgtgaactacact
ttcaaagatcggtcacattcaggccgtgtggctcaaggcatcatgaaactgtgtctagag
gaggagctctttgctgatgtcaccatttcggtggaaggccgggagtttcagctccatcgg
ctggtcctctcagctcagagctgcttcttccgatccatgttcacttccaacctgaaggag
gcccacaaccgggtgattgtgctgcaggatgtcagcgagtctgttttccagctcctggtt
gattatatctaccatgggactgtgaaacttcgagctgaggagttgcaggaaatttatgag
gtgtcagacatgtatcagctgacatctctctttgaggaatgctctcggtttttggcccgc
acagtgcaagtgggaaactgccttcaggtgatgtggctggcagatcggcacagtgatcct
gagctctatacggctgccaagcactgtgccaagacccacctggcccagctgcagaataca
gaggaatttctccacttgccccaccgcttactcacagatatcatctcggatggagttccg
tgttctcagaacccaacagaggcaatagaagcctggatcaactttaataaagaggaaaga
gaggcttttgcagagtcactcaggacaagcttgaaggaaattggggagaatgtgcacatt
tacctgattgggaaagagtcatctcgtacccactcgttggctgtgtccttgcactgtgca
gaagatgactccatcagtgtaagtggccaaaacagtttgtgccaccagatcactgcggcc
tgcaagcatggtggagacttgtatgtggtgggagggtccatcccacggcgcatgtggaag
tgcaacaatgccaccgttgactgggagtggtgtgctcctttgcctcgggaccggctccag
cacaccctggtgtctgtgcccgggaaagatgccatatattcactgggtggcaagacactg
caagataccctctccaacgcagtcatttattatcgcgtaggtgataatgtgtggacagag
acaactcagctagaggtggctgtgtcaggggctgctggtgccaacctcaacgggatcatc
tacttactagggggggaggagaatgatctggacttctttaccaaaccttcccgactcatc
cagtgctttgacacagagacagacaaatgccatgtgaagccctatgtgctgccctttgca
ggccgcatgcacgcagctgtgcataaagatctggtgttcatcgtggctgaaggggactcc
ctggtgtgctacaatcccttgctagacagcttcacccggctttgccttcctgaggcctgg
agctctgccccatccctctggaagattgccagctgtaacgggagcatctatgtcttccgg
gaccgatataaaaagggggatgccaacacctacaagcttgaccctgccacttcagccgta
actgtcacaagaggtattaaggtgctgcttaccaatttgcagtttgtgttggcctaa

>gi568815587r:47472933_47678074|GENSCAN_predicted_peptide_4|264_aa
MAAAAVARLWWRGILGASALTRGTGRPSVLLLPVRRESAGADTRPTVRPRNDVAHKQLSA
FGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVP
TRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFAN
HPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWE
AFPVYRQPPESLKLEAGDKKPDAK

>gi568815587r:47472933_47678074|GENSCAN_predicted_CDS_4|795_bp
atggcggcggcggcggtagccaggctgtggtggcgcgggatcttgggggcctcggcgctg
accagggggactgggcgaccctccgttctgttgctgccggtgaggcgggagagcgccggg
gccgacacgcgccccactgtcagaccacggaatgatgtggcccacaagcagctctcagct
tttggagagtatgtggctgaaatcttgcccaagtatgtccaacaagttcaggtgtcctgc
ttcaatgagttagaggtctgtatccatcctgatggcgtcatcccagtgctgactttcctc
agggatcacaccaatgcacagttcaaatctctggttgacttgacagcagtggacgtccca
actcggcaaaaccgttttgagattgtctacaacctgttgtctctgcgcttcaactcacgg
atccgtgtgaagacctacacagatgagctgacgcccattgagtctgctgtctctgtgttc
aaggcagccaactggtatgaaagggagatctgggacatgtttggagtcttctttgctaac
caccctgatctaagaaggatcctgacagattatggcttcgagggacatcctttccggaaa
gactttcctctatctggctatgttgagttacgttatgatgatgaagtgaagcgggtggtg
gcagagccggtggagttggcccaagagttccgcaaatttgacctgaacagcccctgggag
gctttcccagtctatcgccaacccccggagagtctcaagcttgaagccggagacaagaag
cctgatgccaagtag

>gi568815587r:47472933_47678074|GENSCAN_predicted_peptide_5|204_aa
MAATLQFLVCLVVAICLLSGVTTTQPHAGQPMDSTSVGGGLQEPEAPEVMFEVFPPSLGH
GGHSPPLTWLPLQLLWAGLELDVMGQLHIQDEELASTHPGRRLRLLLQHHVPSDLEGTEQ
WLQQLQDLRKGPPLSTWDFEHLLLTGLSCVYRLHAASEAEERGRWAQVFALLAQETLWDL
CKGFCPQDRPPSLGSWASILDPFP

>gi568815587r:47472933_47678074|GENSCAN_predicted_CDS_5|615_bp
atggctgcgaccctgcagttcctggtttgcctggtggtagccatttgtctcctctctggt
gtgactacaacccagccccatgcagggcagcccatggacagcaccagcgtgggaggtggc
ctgcaggagccagaggccccggaagtgatgtttgaggtctttcctcccagcctgggacat
gggggccacagcccaccccttacatggctccccttgcagctgctctgggctgggctggag
ctggatgtcatggggcagctgcacatccaggatgaggaactagcgtccacacacccaggc
cgccgactcagactcctcctgcagcaccacgtgcccagtgacttggagggcactgagcag
tggctgcagcagctccaggacctgcggaaggggcctcctcttagcacttgggactttgaa
catctgctcctcacaggcctgtcctgcgtctaccggctccacgcagctagtgaggctgag
gaacggggccgctgggcccaggtcttcgctctcctggcacaggaaacactctgggacctg
tgcaaaggtttctgcccccaggaccggcccccttccctggggtcctgggcctccatcctt
gaccccttcccctga

>gi568815587r:47472933_47678074|GENSCAN_predicted_peptide_6|329_aa
MLPLLLGLLGPAACWALGPTPGPGSSELRSAFSAARTTPLEGTSEMAVTFDKVYVNIGGD
FDVATGQFRCRVPGAYFFSFTAGKAPHKSLSVMLVRNRDEVQALAFDEQRRPGARRAASQ
SAMLQLDYGDTVWLRLHGAPQYALGAPGATFSGYLVYADADADAPARGPPAPPEPRSAFS
AARTRSLVGSDAGPGPRHQPLAFDTEFVNIGGDFDAAAGVFRCRLPGAYFFSFTLGKLPR
KTLSVKLMKNRDEVQAMIYDDGASRRREMQSQSVMLALRRGDAVWLLSHDHDGYGAYSNH
GKYITFSGFLVYPDLAPAAPPGLGASELL

>gi568815587r:47472933_47678074|GENSCAN_predicted_CDS_6|990_bp
atgctgccgcttctgctgggcctgctgggcccagcggcctgctgggccctgggcccgacc
cccggcccgggatcctctgagctgcgctcggccttctcggcggcacgcaccacccccctg
gagggcacgtcggagatggcggtgaccttcgacaaggtgtacgtgaacatcgggggcgac
ttcgatgtggccaccggccagtttcgctgccgcgtgcccggcgcctacttcttctccttc
acggctggcaaggccccgcacaagagcctgtcggtgatgctggtgcgaaaccgcgacgag
gtgcaggcgctggccttcgacgagcagcggcggccaggcgcgcggcgcgcagccagccag
agcgccatgctgcagctcgactacggcgacacagtgtggctgcggctgcatggcgccccg
cagtacgcgctaggcgcgcccggcgccaccttcagcggctacctagtctacgccgacgcc
gacgctgacgcgcctgcgcgcgggccgcccgcgccccccgagccgcgctcggccttctcg
gcggcgcgcacgcgcagcttggtgggctcggacgctggccccgggccgcggcaccaacca
ctcgccttcgacaccgagttcgtcaacattggcggcgacttcgacgcggcggccggcgtg
ttccgctgccgtctgcccggcgcctacttcttctccttcacgctgggcaagctgccgcgt
aagacgctgtcggttaagctgatgaagaaccgcgacgaggtgcaggccatgatttacgac
gacggcgcgtcgcggcgccgcgagatgcagagccagagcgtgatgctggccctgcggcgc
ggcgacgccgtctggctgctcagccacgaccacgacggctacggcgcctacagcaaccac
ggcaagtacatcaccttctccggcttcctggtgtaccccgacctcgcccccgccgccccg
ccgggcctcggggcctcggagctactgtga

>gi568815587r:47472933_47678074|GENSCAN_predicted_peptide_7|167_aa
MADAASQVLLGSGLTILSQPLMYVKVLIQHYQESDKGEELGPGNVQKEVSSSFDHVIKEF
FASMLTYPFVLVSNLMAVNNCGVIFLKYSFEHTFFSSTVSTLSAAASEPGKAAGAPAAPA
AARAVSAQPGTRSLQPAARSPQPGARSRAQTEPDSTAAPSQFCKKVN

>gi568815587r:47472933_47678074|GENSCAN_predicted_CDS_7|504_bp
atggcggacgcggccagtcaggtgctcctgggctccggtctcaccatcctgtcccagccg
ctcatgtacgtgaaagtgctcatccagcattaccaggagagtgacaagggtgaggagtta
ggacctggaaatgtacagaaagaagtctcatcttcctttgaccacgttatcaaggagttt
tttgcgagtatgttgacctatccctttgtgcttgtctccaatcttatggctgtcaacaac
tgtggagtaatcttcttaaaatacagctttgagcacaccttcttctcctctactgtaagc
accctgtccgctgccgcctcagagccgggaaaagcagccggagcccccgccgcccctgcc
gcagcgcgggcggtcagcgcgcagcccggcacccgcagcctgcagcctgcagcccgcagc
ccgcagcccggagccagatcgcgggctcagaccgaacccgactcgaccgccgcccccagc
cagttttgcaaaaaggtaaactga

>gi568815587r:47472933_47678074|GENSCAN_predicted_peptide_8|144_aa
FTQCLAELKELLRQEIHKKFHELGQDVDLEGSWSDISLSDIESSTSGSDSSLSDGLPVHL
ANIADEAAKMASGKYAIKWSWASTQVSPSALEIYLLLLKLKFPHLSPSVAISHLHFKSLA
PSLLPPSSEQTAILVKTGSEARLP

>gi568815587r:47472933_47678074|GENSCAN_predicted_CDS_8|435_bp
ttcactcagtgtctagcagagcttaaggagcttttacgacaggaaatccacaagaaattc
catgaacttggacaagatgtagatttagaaggaagttggagtgacatctctttgtctgac
attgaatccagcaccagtggctctgacagttctctctcagatggtcttcctgttcaccta
gcaaacatagcagatgaggctgccaagatggcttcgggaaaatatgccatcaagtggtcc
tgggccagcacacaagtatctccttcagccttggaaatttatcttctgcttctgaaactg
aagttcccgcacctttccccctccgtggctatttcacacctccatttcaagtctcttgct
ccctctctgctgccaccttcctccgagcaaacagccatactagtcaagactggttcagaa
gctaggctcccgtga