GENSCAN 1.0	Date run: 14-Jul-118	Time: 21:18:34

Sequence gi568815595r:3050868_3279687 : 228820 bp : 40.37% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2940   3108  169  2  1  102   52   185 0.990  14.90
 1.02 Intr +  15974  16106  133  0  1   48   -4   175 0.592   3.08
 1.03 Intr +  16740  16938  199  0  1   -5   58   187 0.468   4.83
 1.04 Term +  17212  17274   63  0  0   31   54   107 0.288  -1.49
 1.05 PlyA +  19538  19543    6                               1.05

 2.00 Prom +  28462  28501   40                              -0.25
 2.01 Init +  36978  37120  143  2  2   70  113   109 0.945  11.25
 2.02 Term +  41674  41776  103  1  1  -12   48   130 0.025  -4.23
 2.03 PlyA +  42254  42259    6                              -0.45

 3.09 PlyA -  42276  42271    6                               1.05
 3.08 Term -  42862  42761  102  1  0   97   54    76 0.782   2.40
 3.07 Intr -  44577  44432  146  1  2   75   91    85 0.964   6.58
 3.06 Intr -  47190  47003  188  2  2   86   91   121 0.998  10.61
 3.05 Intr -  47423  47270  154  0  1   56   78    76 0.931   1.61
 3.04 Intr -  50963  50825  139  2  1   62  103   164 0.992  14.42
 3.03 Intr -  51953  51808  146  0  2   34  105    59 0.586   1.28
 3.02 Intr -  54120  54036   85  0  1   82   61   103 0.711   5.47
 3.01 Init -  55173  55123   51  0  0   64   83     1 0.390  -1.44
 3.00 Prom -  58411  58372   40                              -6.25

 4.00 Prom +  60590  60629   40                              -5.35
 4.01 Init +  64304  64429  126  1  0   39   88   126 0.379   7.91
 4.02 Intr +  73942  73992   51  0  0  131   48    34 0.635   1.89
 4.03 Intr +  75461  75550   90  1  0  117  110    36 0.835   7.97
 4.04 Intr +  75875  76123  249  1  0   82  119    54 0.732   4.61
 4.05 Intr +  76458  76680  223  2  1   38   54   152 0.508   3.58
 4.06 Intr +  86393  86586  194  0  2   70   96    98 0.986   7.09
 4.07 Intr +  89643  89781  139  2  1   51   58   160 0.999   8.42
 4.08 Intr +  93717  93843  127  1  1   71  110    26 0.998   1.92
 4.09 Intr +  95563  95756  194  1  2   62   66   189 0.993  12.31
 4.10 Intr +  96583  96836  254  2  2   91   95   186 0.999  15.83
 4.11 Term +  97039  97287  249  0  0    7   41   213 0.977   3.22
 4.12 PlyA +  97375  97380    6                               1.05

 5.10 PlyA -  97642  97637    6                               1.05
 5.09 Term - 101128 101018  111  1  0   35   48    82 0.430  -3.52
 5.08 Intr - 103195 103093  103  0  1   52   87   132 0.744   8.76
 5.07 Intr - 122058 121909  150  2  0   -2   86   155 0.842   4.66
 5.06 Intr - 123394 123192  203  1  2   28   98   169 0.370   9.06
 5.05 Intr - 124402 124296  107  2  2   48   45   136 0.050   4.31
 5.04 Intr - 128726 128549  178  2  1   13   52    86 0.023  -3.93
 5.03 Intr - 128961 128754  208  2  1   51   51   238 0.035  14.56
 5.02 Intr - 130858 130758  101  1  2   75   54    80 0.024   1.29
 5.01 Init - 146817 146716  102  0  0   65  116    64 0.714   7.19
 5.00 Prom - 155779 155740   40                              -2.65

 6.00 Prom + 157383 157422   40                              -8.65
 6.01 Init + 158825 158873   49  1  1   71   58    76 0.231   2.06
 6.02 Intr + 161585 161671   87  0  0   77   86    63 0.231   4.02
 6.03 Intr + 193238 193359  122  0  2  129   75    43 0.111   6.39
 6.04 Intr + 197634 197739  106  2  1   56   81    13 0.004  -3.73
 6.05 Intr + 210254 210390  137  0  2   68   98    59 0.876   4.27
 6.06 Intr + 212758 212829   72  0  0   75   60   113 0.773   5.88
 6.07 Term + 213573 213686  114  2  0   86   53    83 0.896   2.19
 6.08 PlyA + 213923 213928    6                               1.05

 7.00 Prom + 222401 222440   40                              -6.05
 7.01 Init + 223179 223267   89  2  2   43   58   150 0.107   7.66
 7.02 Intr + 224381 224508  128  2  2   82   63    51 0.278   1.40
 7.03 Term + 227160 227284  125  1  2   74   42    47 0.066  -3.73
 7.04 PlyA + 227686 227691    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:3050868_3279687|GENSCAN_predicted_peptide_1|187_aa
VLYRWNRQSSTSVIETNKTSVELSLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISTLPH
AARSEFQMPRKEIGLKIPIGTDILEKHVCSDPVAVEALGEKLHGGSDDGYGFPKNDYELH
RARREEGVPNPPRRPMGYFVLLLKHIYQGPDNGTSSGKCGKELHRAQTLLEQQFSECVLE
TSSMSIT

>gi568815595r:3050868_3279687|GENSCAN_predicted_CDS_1|564_bp
gtcttgtacagatggaacagacaaagcagcacatctgtcattgaaacaaataaaacatcg
gtggagctttctttgcctttcgatgaagattatataatagaaattaagccattcagcgac
ggaggagatggcagcagcagtgaacaaattcgaattccaaagatatcaacactcccccat
gctgcacgcagtgaattccaaatgccaaggaaagaaattgggctaaaaatccctattgga
acggatatcttggaaaagcatgtttgttctgatcccgtggctgtggaggctctaggagaa
aagcttcatggaggaagtgatgatggttacgggttcccaaagaatgactatgagttgcac
agggcaagaagggaggaaggagttcccaatccaccaaggaggccaatgggctactttgtg
ttgctcctgaaacacatataccaagggccagataacggtaccagctcagggaagtgtggc
aaggagctccacagagcccagactctcctggagcagcagttctccgagtgtgtcctggag
accagcagcatgagcatcacctga

>gi568815595r:3050868_3279687|GENSCAN_predicted_peptide_2|81_aa
MQNVPEGLGLPITFINHLDENGKSTLIKFTNDPKLSRGVNSRKDGFISHPSVERYLVTKI
YEMINGQDPGVPIQAQLMFPD

>gi568815595r:3050868_3279687|GENSCAN_predicted_CDS_2|246_bp
atgcaaaatgtcccagaggggcttggacttcctattacgtttattaatcatcttgatgaa
aatggaaagtctacattgattaaattcactaatgatcctaaactgagcagaggagtaaat
tccagaaaggatggatttataagtcacccttcagtggaacgctatcttgtaaccaaaata
tacgaaatgatcaacggtcaagatccaggtgttcctatccaggcccagctgatgtttcca
gactga

>gi568815595r:3050868_3279687|GENSCAN_predicted_peptide_3|336_aa
MYNSHMCLVPNLWGEHVDMIIVAHVLLILLGATEILQADLLPDEKISLLPPVNFTIKVTG
LAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYETRITESKCVTILHKGFSASVRTIL
QNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWLVGTD
APEDTQYFLYYRYGSWTEECQEYSKDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHS
AIRPFDQLFALHAIDQINPPLNVTAEIEGTRLSIQWEKPVSAFPIHCFDYEVKIHNTRNG
YLQEKPVQLEMGVWAQSLLCREELNGICKDEEKLVW

>gi568815595r:3050868_3279687|GENSCAN_predicted_CDS_3|1011_bp
atgtataacagccacatgtgtctggtaccaaatctctggggggagcacgtggatatgatc
atcgtggcgcatgtattactcatccttttgggggccactgagatactgcaagctgactta
cttcctgatgaaaagatttcacttctcccacctgtcaatttcaccattaaagttactggt
ttggctcaagttcttttacaatggaaaccaaatcctgatcaagagcaaaggaatgttaat
ctagaatatcaagtgaaaataaacgctccaaaagaagatgactatgaaaccagaatcact
gaaagcaaatgtgtaaccatcctccacaaaggcttttcagcaagtgtgcggaccatcctg
cagaacgaccactcactactggccagcagctgggcttctgctgaacttcatgccccacca
gggtctcctggaacctcaattgtgaatttaacttgcaccacaaacactacagaagacaat
tattcacgtttaaggtcataccaagtttcccttcactgcacctggcttgttggcacagat
gcccctgaggacacgcagtattttctctactataggtatggctcttggactgaagaatgc
caagaatacagcaaagacacactggggagaaatatcgcatgctggtttcccaggactttt
atcctcagcaaagggcgtgactggcttgcggtgcttgttaacggctccagcaagcactct
gctatcaggccctttgatcagctgtttgcccttcacgccattgatcaaataaatcctcca
ctgaatgtcacagcagagattgaaggaactcgtctctctatccaatgggagaaaccagtg
tctgcttttccaatccattgctttgattatgaagtaaaaatacacaatacaaggaatgga
tatttgcaggaaaagccagtacagctagagatgggggtgtgggcacagagcctgctctgc
agagaggaattgaacggaatctgtaaggatgaagagaaactagtctggtga

>gi568815595r:3050868_3279687|GENSCAN_predicted_peptide_4|631_aa
MQMKTTLRYLFTPTPMAEMKRTITTVDEDVETLEPSHTVAGELTFHGHGFSISGFNQPQK
ELMNWIKSKFSTLQMGSLRAKEANGYTNQGPPGLRFAPAGLGGAGKPAEVRLTVGRSDGR
RKPFGPGPAPALALAPPRLPIRRQPMCVGDVTAFTSPEVRVAAVAAAATAGPSVFLSRGG
GARKLSGSFRPTWPAGKRGSSTRFRGMEWFFSAGLHRGHSRAAAASLWAGPPYGENEDVI
CRREGRELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQMKEMFQSAGIRMINN
RGEKHGTITARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFD
GTLFDYFNGYEDLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIVDKPGDHDPETLEAI
AENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLDVAPYIGLPANASLEEFDKVSK
NVDGFSPKPVTLLASLFKVQDDVTKLDLRLKIAKEEKNLGLFIVKNRKDLIKATDSSDPL
KPYQDFIIDSREPDATTRVCELLKYQGEHCLLKEMQQWSIPPFPVSGHDIRKVGISSGKE
IGALLQQLREQWKKSGYQMEKDELLSYIKKT

>gi568815595r:3050868_3279687|GENSCAN_predicted_CDS_4|1896_bp
atgcaaatgaaaaccacactgagatacctcttcacacccactccaatggctgaaatgaaa
aggacaataacaactgttgatgaagatgtggaaacactggaaccctcacatactgttgct
ggggagttgaccttccatggccatgggttctccatcagtggattcaaccagccacagaaa
gaattaatgaactggatcaaatctaagttctccacgttacagatgggaagcctccgggcc
aaggaggccaatggttacacaaaccagggccccccggggctccgcttcgccccagcgggc
ctcggcggggctgggaaaccggctgaggttcgcctcacggtggggaggagcgacgggagg
cggaagcccttcggtccgggccccgcccccgcactcgccctcgccccgccgcgacttccc
attcgccgccaacccatgtgcgttggtgacgtcaccgcgttcaccagcccggaagtgcgc
gtggcggcggtggcggctgcggcaacagcggggccgagcgttttcctaagtcgaggcgga
ggtgcgaggaaactgagtgggtctttccgccccacgtggcctgccgggaagcgcggctcc
tccacccgcttccgtggaatggaatggtttttctctgcaggtttacaccggggtcactcg
agagctgctgcggcctccttatgggcaggacccccgtatggggagaacgaggatgtgata
tgtagaagggaaggccgcgaattatttgtcaaagagaatcacgaattaagaatagcagga
ggagcagtgagggatttattaaatggagtaaagcctcaggatatagattttgccaccact
gctacccctactcaaatgaaggagatgtttcagtcggctgggattcggatgataaacaac
agaggagaaaagcacggaacaattactgccaggcttcatgaagaaaattttgagattact
acactacggattgatgtcaccactgatggaagacatgctgaggtagaatttacaactgac
tggcagaaagatgcggaacgcagagatctcactataaattctatgtttttaggttttgat
ggcactttatttgactactttaatggttatgaagatttaaaaaataagaaagttagattt
gttggacatgctaaacagagaatacaagaggattatcttagaattttaagatacttcagg
ttttatgggagaattgtagacaaacctggtgaccatgatcctgagactttggaagcaatt
gcagaaaatgcaaaaggcttggctggaatatcaggagaaaggatttgggtggaactgaaa
aaaattcttgttggtaaccatgtaaatcatttgattcaccttatctatgatcttgatgtg
gctccttatataggtttacctgctaatgcaagtttagaagaatttgacaaagtcagtaaa
aatgttgatggtttttcaccaaagccagtgactcttttggcctcattattcaaagtacaa
gatgatgtcacaaaattggatttgaggttgaagatcgcaaaagaggagaaaaaccttggc
ttatttatagttaaaaataggaaagatttaattaaagcaacagatagttcagacccattg
aaaccctatcaagacttcattatagattctagggaacctgatgcaactactcgtgtatgt
gaactactgaagtaccaaggagagcactgtctcctaaaggaaatgcagcagtggtccatt
cctccatttcctgtaagtggccatgacatcagaaaagtgggcatttcttcaggaaaagaa
attggggctctattacaacagttgcgagaacagtggaaaaaaagtggttaccaaatggaa
aaagatgaacttctgagttacataaagaagacctaa

>gi568815595r:3050868_3279687|GENSCAN_predicted_peptide_5|420_aa
MEEGSQRWDIAALKTEKKAMNQRIWAASRHWKGKSSLSIDTARKQEEMLGTTQYDIFFQD
KVTKLNKWLGYAPPSAPLGPPGGAVAPVRGSRATRALPRSLRHRPVPASFAGKQTWPAKE
ISRTLRTTWATTCRSCLSGVGRGSEPLAVQLGLGGGRGGAKPGEPAQQGRTGKLLHVGPR
PAMESRRFLRCSVAPSPESEEEDEMEVEDQDSKEAKKPNIINFDTSLPTSHTYLGADMEE
FHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQKDRTFAVLAYS
NVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGVAACLPIDDV
LRIQLLKIGSAIQRLRCELDIMNKSCNSENQLSYDPVELYIWTIFCSNVKPENVYKAMID

>gi568815595r:3050868_3279687|GENSCAN_predicted_CDS_5|1263_bp
atggaagaagggtcacagagatgggatattgctgctttgaagactgagaagaaggccatg
aaccaaagaatctgggcagcctctagacactggaagggcaagagctccttatccattgat
actgcacgcaagcaagaggaaatgttaggaacaactcagtatgatatcttctttcaggat
aaagttaccaaattaaacaaatggcttgggtacgcgccgccgtctgctcccctggggccg
ccagggggcgctgtggccccggtgcgcggcagccgcgcgacacgggccctccctcggagt
cttcggcaccgccctgtcccagcctcctttgcgggtaaacagacatggccggcgaaggag
atcagcaggacgctgcgcacaacatgggcaaccacctgccgctcctgcctgtcgggagtg
gggcgaggctcggagccgctagcggtgcagctgggcctgggaggcgggcgtgggggcgcc
aagcctggcgagccagcccagcagggccgcaccggaaagctgcttcacgtcggccctcgg
ccagcgatggagtcgcggcgctttcttcgctgctctgttgccccgagcccagagagtgag
gaagaagatgaaatggaagttgaagaccaggatagtaaagaagccaaaaaaccaaacatc
ataaattttgacaccagtctgccgacatcacatacatacctaggtgctgatatggaagaa
tttcatggcaggactttgcacgatgacgacagctgtcaggtgattccagttcttccacaa
gtgatgatgatcctgattcccggacagacattacctcttcagctttttcaccctcaagaa
gtcagtatggtgcggaatttaattcagaaagatagaacctttgctgttcttgcatacagc
aatgtacaggaaagggaagcacagtttggaacaacagcagagatatatgcctatcgagaa
gaacaggattttggaattgagatagtgaaagtgaaagcaattggaagacaaaggttcaaa
gtccttgagctaagaacacagtcagatggagtagctgcttgtcttcctattgatgatgta
ttgagaattcagctccttaaaattggcagtgctatccagcgacttcgctgtgaattagac
attatgaataaatcatgtaattctgaaaatcagctgtcttatgacccagtagaactttat
atctggaccatattctgtagtaatgtaaaaccggagaatgtttacaaagcaatgatagac
taa

>gi568815595r:3050868_3279687|GENSCAN_predicted_peptide_6|228_aa
MGFRRVGQAGLELLTTAGCLEELRMYGPKKKRIKREVIAGCYVEEGSPDAISGAIPRRIG
QQCHGTGRDSHQHLHVWGPKEKLPNQAYAMISLESLARVGIATLKGMHISHFDTYGQVTF
QEHLAAQTKLSAGPEATSSLGDDTVICLIMSVGVIGPGFKNKIEKHTVEQAEEEEEEERL
ILLSQVEEVEESWKPNAIVKYSQSIKQICKLDLARNKEAGLEEIPGRH

>gi568815595r:3050868_3279687|GENSCAN_predicted_CDS_6|687_bp
atgggatttcgccgtgttggccaggctggtctcgaactcctgaccacagctggttgcttg
gaagaactgagaatgtatgggcccaaaaagaaaaggattaagagagaagtaatagctggc
tgctatgtggaagaaggttctccagatgcaatcagtggagccatccctagaaggataggt
cagcaatgccatggcactgggagggacagtcatcaacaccttcatgtttggggtcccaag
gagaagctacccaatcaggcttatgcaatgatttccttagaatcacttgctagagtagga
attgctacattaaagggaatgcacatttcacattttgatacctatggtcaggttactttt
caagagcacttggcagctcagacaaaattgtctgctggtcctgaggccacctcctccctg
ggagatgatacagtgatatgcctgataatgtctgttggtgtcataggcccagggtttaaa
aacaaaattgaaaaacacacagttgagcaggccgaggaggaggaggaagaggagaggttg
atcttgctgtctcaggtagaagaggtggaggagagttggaagccaaatgcgattgttaaa
tattcacaatcgataaaacaaatctgtaaacttgatttagctcggaataaggaagctgga
ctggaggagatccctggaaggcactga

>gi568815595r:3050868_3279687|GENSCAN_predicted_peptide_7|113_aa
MWCYDDATCNGTVEDEDGENEGKQLKRDKVNLSIGVSLRLFKGGVLEVLHGEESRSTLVD
QSHRYWEGGVSPNSYEDKRLYTSLTISSRENSLWAPRSLHKNSSVEFRPDSVN

>gi568815595r:3050868_3279687|GENSCAN_predicted_CDS_7|342_bp
atgtggtgttatgatgatgctacatgcaatgggacagtagaagacgaagacggagaaaat
gaaggaaagcaactaaagcgggacaaagtgaatctgagcattggagtatctttaagactc
tttaaaggtggagttttagaggttctacatggagaagaatcacgttctactctggtggat
caatctcatagatattgggagggtggtgtctccccaaatagctatgaagacaaaaggctg
tatacctccctcacaatttcctcaagggaaaattccttgtgggccccaagatctttacac
aaaaacagttctgttgaatttcgccctgacagtgtaaattaa