GENSCAN 1.0	Date run:  5-Nov-116	Time: 03:49:44

Sequence gi568815589r:104435773_104636813 : 201041 bp : 36.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   9064   9265  202  1  1   70   56   104 0.331   3.77
 1.02 Term +  18312  18371   60  2  0  105   51    87 0.539   3.53
 1.03 PlyA +  18514  18519    6                               1.05

 2.06 PlyA -  18625  18620    6                               1.05
 2.05 Term -  24314  24161  154  1  1   89   48   137 0.663   6.21
 2.04 Intr -  35216  35119   98  2  2   87   84    30 0.286   0.39
 2.03 Intr -  37881  37777  105  0  0   73   75    90 0.560   5.69
 2.02 Intr -  42729  42597  133  2  1   46  119    14 0.409   0.03
 2.01 Init -  60178  59985  194  1  2   67   60   168 0.361  10.39
 2.00 Prom -  65755  65716   40                              -3.75

 3.00 Prom +  66704  66743   40                              -8.95
 3.01 Init +  68809  69378  570  0  0   73   52   333 0.010  23.33
 3.02 Intr +  85235  85403  169  1  1   29   71   147 0.031   5.70
 3.03 Term +  87082  87248  167  2  2   21   38   125 0.082  -2.10
 3.04 PlyA +  87950  87955    6                               1.05

 4.02 PlyA -  88105  88100    6                               1.05
 4.01 Sngl -  91086  90481  606  0  0   87   44   205 0.427  11.94
 4.00 Prom -  91962  91923   40                              -4.95

 5.02 PlyA -  93903  93898    6                               1.05
 5.01 Sngl - 100600  99998  603  1  0   87   39   314 0.384  22.34
 5.00 Prom - 105842 105803   40                              -3.45

 6.00 Prom + 119925 119964   40                              -3.75
 6.01 Sngl + 133747 134358  612  0  0   99   42   420 0.802  34.44
 6.02 PlyA + 134830 134835    6                               1.05

 7.00 Prom + 149578 149617   40                              -3.75
 7.01 Init + 154975 155127  153  0  0   72   42    95 0.619   3.33
 7.02 Term + 156597 156758  162  2  0   14   48   214 0.941   6.95
 7.03 PlyA + 158832 158837    6                               1.05

 8.03 PlyA - 158948 158943    6                               1.05
 8.02 Term - 163495 162685  811  0  1   17   36   355 0.004  14.86
 8.01 Init - 169756 168903  854  1  2   38   89   510 0.027  40.26
 8.00 Prom - 171933 171894   40                              -6.95

 9.02 PlyA - 172081 172076    6                               1.05
 9.01 Sngl - 182114 181476  639  2  0   83   42   318 0.553  22.63
 9.00 Prom - 187157 187118   40                              -7.65

10.00 Prom + 187453 187492   40                              -3.65
10.01 Init + 188718 188928  211  2  1   68   57   144 0.551   8.29
10.02 Term + 189388 189929  542  2  2   32   38   251 0.520   7.93
10.03 PlyA + 190663 190668    6                               1.05

11.02 PlyA - 190818 190813    6                               1.05
11.01 Sngl - 198671 198456  216  2  0   68   53   253 0.966  14.72

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:104435773_104636813|GENSCAN_predicted_peptide_1|87_aa
XCFLPSNNRLQVLQIWILGLTSAICQGLQPQTEGCTVSFPTFEVLGLGLASLLLSLQTAY
HGTSPCDCSLRVTTIEKKNKELGKVQR

>gi568815589r:104435773_104636813|GENSCAN_predicted_CDS_1|264_bp
nnatgctttctgccctcgaacaacagactccaagttcttcaaatttggattcttggactt
acatcagcgatttgccagggccttcagccacagactgaaggctgcactgtcagcttccct
acttttgaggttttgggacttggactggcttccttgctcctcagcttgcagacggcctat
catgggacttcaccttgtgattgtagtttaagagtgaccacaattgagaaaaagaacaag
gaactgggcaaagttcagagatga

>gi568815589r:104435773_104636813|GENSCAN_predicted_peptide_2|227_aa
MSKKNVQGTKSKRWGHKLHQKAVCSVKQEHGAKPRRLEVMGHKIQPTKDSNRQTKAYIGE
KSNHWIWRENKSGLDSFGTQKLFPVPWGMEVARTVGWGSLDFDRHQNDLAALNVAKGYRY
ELVFAKILDFEIHRVPFEDLWTVEDGGSPFAFYHDWKLPEASPEAEATILPVQPEEPCYF
TDLVHSLSQVSIRHPPYGDVINKRPSTVNSPDFPPGTRFISMNDFYE

>gi568815589r:104435773_104636813|GENSCAN_predicted_CDS_2|684_bp
atgtctaagaaaaatgttcaaggaacaaagtcaaagaggtggggccacaaacttcatcaa
aaggcggtttgcagtgtgaagcaggaacacggagcaaagccaaggcgtctggaagtcatg
ggacacaagatccaaccaacaaaagattcaaatcgtcagacgaaggcctatattggtgaa
aaaagtaaccattggatttggagagaaaataaaagtgggctggactcttttggaacccag
aaacttttccctgtcccctggggcatggaggtggcaagaactgtggggtggggttcattg
gattttgataggcatcaaaatgacctggctgcacttaacgttgcaaagggctacaggtat
gagctggtatttgctaagatcttggattttgaaattcatagagttccatttgaggatcta
tggactgtggaggatggcggctccccctttgctttctaccatgattggaagcttcctgag
gcctccccagaagcagaagccactatacttcctgtacagcctgaagaaccgtgttacttc
acagacctggttcattccttgtctcaggtctccatccggcacccaccctatggagacgtc
attaataaacgtccatccacagtaaacagcccagactttccacctggcactaggtttatt
tcaatgaatgacttttatgagtga

>gi568815589r:104435773_104636813|GENSCAN_predicted_peptide_3|301_aa
MGSTECVLLPMMAYDRYVAICNPLRYPVIMNRRTCVQIAAGSWMTGCLTAMVEMMSVLPL
SLCGNSIINHFTCEILAILKLVCVDTSLVQLIMLVISVLLLPMPMLLICISYAFILASIL
RISSVEGRSKAFSTCTAHLMVVVLFYGTALSMHLKPSAVDSQEIDKFMALVYAGQTPMLN
PIIYSLRNKEPPLVIPRQTGSGVDLQQTPADLQQRGLTVGRKTNKQKGIAHPLRDPIRRS
PTSKTKEKGNLHRKLRLKAAVKTTGDVQQGYAVLGHVRRIHRKRNKKDCNRFTEEFKLTG
M

>gi568815589r:104435773_104636813|GENSCAN_predicted_CDS_3|906_bp
atgggctccactgagtgtgtgctcctgcccatgatggcatatgaccggtatgtggccatc
tgcaaccccctgagataccctgtcatcatgaataggagaacctgtgtgcagattgcagct
ggctcctggatgacaggctgtctcactgccatggtggaaatgatgtctgtgctgccactg
tctctctgtggtaatagcatcatcaatcatttcacttgtgaaattctggccatcttgaaa
ttggtttgtgtggacacctccctggtgcagttaatcatgctggtgatcagtgtacttctt
ctccccatgccaatgctactcatttgtatctcttatgcatttatcctcgccagtatcctg
agaatcagctcagtggaaggtcgaagtaaagccttttcaacgtgcacagcccacctgatg
gtggtagttttgttctatgggacggctctctccatgcacctgaagccctccgctgtagat
tcacaggaaatagacaaatttatggctttggtgtatgccggacaaacccccatgttgaat
cctatcatctatagtctacggaacaaagagcctccgctggtgatacccaggcaaacaggg
tctggggtggaccttcagcaaactccagcagacctgcagcagaggggcttgactgttgga
aggaaaactaacaaacagaaaggaatagcacatccactcagagaccccatccgaaggtca
ccaacatcaaagaccaaagaaaaaggaaatttacataggaaattaaggctaaaagcagct
gtaaaaacgactggtgatgtgcagcaaggatatgctgtgcttggccatgtcagaagaatc
cacagaaaaagaaacaaaaaggattgtaataggtttactgaagagtttaaactcactgga
atgtaa

>gi568815589r:104435773_104636813|GENSCAN_predicted_peptide_4|201_aa
MAFDRYVAICNPLRYPIIMNKVVYVLLTSVSWLSGGINSTVQTSLAMRWPFCGNNIINHF
LCEILAVLKLACSDISVNIVTLAVSNIAFLVLPLLVIFFSYMFILYTILRTNSATGRHKA
FSTCSAHLTVVIIFYGTIFFMYAKPKSQDLLGKDNLQATEGLVSMFYGVVTPMLNPIIYS
LRNKDVKAAIKYLLSRKAINQ

>gi568815589r:104435773_104636813|GENSCAN_predicted_CDS_4|606_bp
atggcatttgatcgttatgtggccatctgtaaccctctgagataccccatcatcatgaac
aaggtggtgtatgtactgctgacttctgtatcatggctttctggtggaatcaattcaact
gtgcaaacatcacttgccatgcgatggcctttctgtgggaacaatattattaatcatttc
ttatgcgagatcttagctgtcctaaaattagcttgttctgatatatctgtcaatattgtt
accctagcagtgtcaaatattgctttcctagttcttcctctgctcgtgatttttttctcc
tatatgttcatcctctacaccatcttgcgaacgaactcggccacaggaagacacaaggca
ttttctacatgctcagctcacctgactgtggtgatcatattttatggtaccatcttcttt
atgtatgcaaaacctaagtcccaggacctccttgggaaagacaacttgcaagctacagag
gggcttgtttccatgttttatggggttgtgacccccatgttaaaccccataatctatagc
ttgagaaataaagatgtaaaagctgctataaaatatttgctgagcaggaaagctattaac
cagtaa

>gi568815589r:104435773_104636813|GENSCAN_predicted_peptide_5|200_aa
MAFDRYVAICNPLRYPIILSKVAYVLMASVSWLSGGINSAVQTLLAMRLPFCGNNIINHF
ACEILAVLKLACADISLNIITMVISNMAFLVLPLMVIFFSYMFILYTILQMNSATGRRKA
FSTCSAHLTVVIIFYGTIFFMYAKPKSQDLIGEEKLQALDKLISLFYGVVTPMLNPILYS
LRNKDVKAAVKYLLNKKPIH

>gi568815589r:104435773_104636813|GENSCAN_predicted_CDS_5|603_bp
atggcatttgatcgttatgtggccatctgcaacccactgagataccccatcatcctgagc
aaggtggcgtatgtattgatggcttctgtgtcctggctgtccggtggaataaattcagct
gtgcaaacattacttgccatgagactgcctttctgtgggaataatattatcaatcatttc
gcatgtgaaatattagctgtcctcaagctggcctgtgctgatatatccctcaatattatc
accatggtgatatcaaatatggccttcctggttcttccactgatggtcatttttttctcc
tatatgttcatcctctacaccatcttgcaaatgaattcagccacaggaagacgcaaggca
ttttccacgtgctcagctcacctgactgtggtgatcatattttacggtaccatcttcttt
atgtatgcgaaaccgaagtctcaagacctgattggggaagaaaaattgcaagcattagac
aagctcatttctctgttttatggggtagtgacacccatgctgaatcctatactctatagc
ttgagaaataaggatgtaaaagctgctgtaaaatatttgctgaacaaaaaaccaattcac
taa

>gi568815589r:104435773_104636813|GENSCAN_predicted_peptide_6|203_aa
MALDRYVAICYPLRYPVIMSKGAYVAMAAGSWVTGLVDSVVQTAFAMQLPFCANNVIKHF
VCEILAILKLACADISINVISMTGSNLIVLVIPLLVISISYIFIVATILRIPSTEGKHKA
FSTCSAHLTVVIIFYGTIFFMYAKPESKASVDSGNEDIIEALISLFYGVMTPMLNPLIYS
LRNKDVKAAVKNILCRKNFSDGK

>gi568815589r:104435773_104636813|GENSCAN_predicted_CDS_6|612_bp
atggcactggaccgctatgtggccatctgctacccactgagataccctgtcatcatgagc
aagggtgcctatgtggccatggcagctgggtcctgggtcactgggcttgtggactcagta
gtgcagacagcttttgcaatgcagttaccattctgtgctaataatgtcattaaacatttt
gtctgtgaaattctggctatcttgaaactggcctgtgctgatatttcaatcaatgtgatt
agtatgacagggtcgaatctgattgttctggttattccattgttagtaatttccatctct
tacatatttattgttgccactattctgaggattccttccactgaaggaaaacataaggcc
ttctccacctgctcagcccacctgacagtggtgattatattctatggaaccatcttcttc
atgtacgcaaagcctgagtctaaagcctctgttgattcaggtaatgaagacatcattgag
gccctcatctcccttttctatggagtgatgactcccatgcttaatcctctcatctatagt
ctgcgaaacaaggatgtaaaggctgctgtcaaaaacatactgtgtaggaaaaacttttct
gatggaaaatga

>gi568815589r:104435773_104636813|GENSCAN_predicted_peptide_7|104_aa
MTVVIVFYGTILFMYMKAKSKDSAFDKLIALFYGIVTPMLNPIIYSLRNTEYDVLEPVQN
KEDVNVEERLSSGCQSPSSMKGAYTQEEGVDPSTWLRTTHAKKS

>gi568815589r:104435773_104636813|GENSCAN_predicted_CDS_7|315_bp
atgacagtggtgattgtgttttatgggacaatcctcttcatgtacatgaaggcaaagtcc
aaagactctgcttttgacaaactgattgccctgttctatggcatagtcacccccatgctc
aatcctatcatctatagcctgaggaatacagagtatgatgttttggagcctgtccagaat
aaggaagatgtcaacgtggaagagaggctcagttcagggtgtcaaagtccaagcagcatg
aaaggagcatacacacaagaggaaggtgtggatcctagcacctggttgaggaccactcat
gcaaagaaaagctga

>gi568815589r:104435773_104636813|GENSCAN_predicted_peptide_8|554_aa
MYVVILLGNGTLILISILDPHLHTPMYFFLGNLSFLDICYTTTSIPSTLVSFLSERKTIS
LSGCAVQMFLGLAMGTTECVLLGMMAFDRYVAICNPLRYPIIMSKDAYVPMAAGSWIIGA
VNSAVQSVFVVQLPFCRNNIINHFTCEILAVMKLACADISDNEFIMLVATTLFILTPLLL
IIVSYTLIIVSIFKISSSEGRSKASSTCSAHLTVVIIFYGTILFMYMKPKSKETLNSDDL
DATDKIISMFYGVMTPMMNPLIYSLRNKDVKEAVKHLLNRRFFSNILDPHLHTPMYFFLG
NLSFLDICYTTTSIPSTLVSFLSERKTISLSGCAVQMFLSLAMGTTECVLLGVMAFDRYV
AICNPLRYPIIMSKDAYVPMAAGSWIIGAVNSAVQTVFVVQLPFCRNNIINHFTCEILAV
MKLACADISGNEFILLVTTTLFLLTPLLLIIVSYTLIILSIFKISSSEGRSKPSSTCSAR
LTVVITFCGTIFLMYMKPKSQETLNSDDLDATDKLIFIFYRVMTPMMNPLIYSLRNKDVK
EAVKHLLRRKNFNK

>gi568815589r:104435773_104636813|GENSCAN_predicted_CDS_8|1665_bp
atgtatgtggtcatccttctggggaatggtactctcattttaatcagcatcttggaccct
caccttcacacccctatgtacttctttctggggaacctctccttcttggacatctgctac
accaccacctctattccctccacgctagtgagcttcctttcagaaagaaagaccatttcc
ctttctggctgtgcagtgcagatgttcctcggcttggccatggggacaacagagtgtgtg
cttctgggcatgatggcctttgaccgctatgtggctatctgcaaccctctgagatatccc
atcatcatgagtaaggatgcctatgtacccatggcagctgggtcctggatcataggagct
gtcaattctgcagtacaatcagtgtttgtggtacaattgcctttctgcaggaataacatc
atcaatcatttcacctgtgaaattctggctgtcatgaaactggcctgtgctgacatctca
gacaatgagttcatcatgcttgtggccacaacattgttcatattgacacctttgttatta
atcattgtctcttacacgttaatcattgtgagcatcttcaaaattagctcttccgagggg
agaagcaaagcttcctctacctgttcagcccatctgactgtggtcataatattctatggg
accatcctcttcatgtacatgaagcccaagtctaaagagacacttaattcggatgacttg
gatgctaccgacaaaattatatccatgttctatggggtgatgactcccatgatgaatcct
ttaatctacagtcttagaaacaaggatgtgaaagaggcagtaaaacacctactgaacaga
aggttctttagcaacatcttggaccctcaccttcacacccctatgtacttctttctgggg
aacctctccttcttggacatctgctacaccaccacctctattccctccacgctagtgagc
ttcctttcagaaagaaagaccatttccctttctggctgtgcagtgcagatgttcctcagc
ttggccatggggacaacagagtgtgtgcttctgggcgtgatggcctttgaccgctatgtg
gctatctgcaaccctctgagatatcccatcatcatgagtaaggatgcctatgtacccatg
gcagctgggtcctggatcataggagctgtcaattctgcagtacaaacagtgtttgtggta
caattgcctttctgcaggaataacatcatcaatcatttcacctgtgaaattctagctgtc
atgaaactggcctgtgctgacatctcaggcaatgagttcatcctgcttgtgaccacaaca
ttgttcctattgacacctttgttattaattattgtctcttacacgttaatcattttgagc
atcttcaaaattagctcttcggaggggagaagcaaaccttcctctacctgctcagctcgt
ctgactgtggtgataacattctgtgggaccatcttcctcatgtacatgaagcccaagtct
caagagacacttaattcagatgacttggatgccactgacaaacttatattcatattctac
agggtgatgactcccatgatgaatcctttaatctacagtcttagaaacaaggatgtgaag
gaggcagtaaaacacctactgagaagaaaaaattttaacaagtaa

>gi568815589r:104435773_104636813|GENSCAN_predicted_peptide_9|212_aa
MGTTECVLLGMMAFDRYVAICNPLRYPIIMSKNAYVPMAVGSWFAGIVNSAVQTTFVVQL
PFCRKNVINHFSCEILAVMKLACADISGNEFLMLVATILFTLMPLLLIVISYSLIISSIL
KIHSSEGRSKAFSTCSAHLTVVIIFYGTILFMYMKPKSKETLNSDDLDATDKIISMFYGV
MTPMMNPLIYSLRNKDVKEAVKHLPNRRFFSK

>gi568815589r:104435773_104636813|GENSCAN_predicted_CDS_9|639_bp
atggggacaacagagtgtgtgcttctgggcatgatggcctttgaccgctatgtggctatc
tgcaaccctctgagatatcccatcatcatgagcaagaatgcctatgtacccatggctgtt
gggtcctggtttgcagggattgtcaactctgcagtacaaactacatttgtagtacaattg
cctttctgcaggaagaatgtcatcaatcatttctcatgtgaaattctagctgtcatgaag
ttggcctgtgctgacatctcaggcaatgagttcctcatgcttgtggccacaatattgttc
acattgatgccactgctcttgatagttatctcttactcattaatcatttccagcatcctc
aagattcactcctctgaggggagaagcaaagctttctctacctgctcagcccatctgact
gtggtcataatattctatgggaccatcctcttcatgtatatgaagcccaagtctaaagag
acacttaattcagatgacttggatgctaccgacaaaattatatccatgttctatggggtg
atgactcccatgatgaatcctttaatctacagtcttagaaacaaggatgtgaaagaggca
gtaaaacacctaccgaacagaaggttctttagcaagtga

>gi568815589r:104435773_104636813|GENSCAN_predicted_peptide_10|250_aa
MWKRLWNWVTGRRWKSLEGSEEDRKMWESLELPTDLLNGFTQNVDSNMDNKVQAEVVSDG
DEKLVGSWSKAAPDVAKRGQCRARAMASEGVSLKPQKLPHGVEPASAPKSRIGVWKPLPR
LQKMYGNTWMSRQKFAAGMGCSWRTSDRAVQEGKVGLEPPHRVPTGALPSGAVRRGPPPS
RLQNGRSTNSLHHLPGKATDTQYQPVKVAEKEAVLCKATGSELPKTMGMHFLHQCDLDMR
PESKEIILEL

>gi568815589r:104435773_104636813|GENSCAN_predicted_CDS_10|753_bp
atgtggaagcgactttggaactgggtaacaggcagaagatggaagagtttggagggctca
gaagaagacaggaaaatgtgggaaagtttagaacttcctacagacttgctgaatggcttt
acccaaaatgttgatagcaatatggataataaggtccaggctgaggtggtctcagatgga
gatgagaaacttgttgggagctggagcaaagctgctccagatgtggctaaaaggggccaa
tgcagagctcgggccatggcttcagagggggtaagcctcaagcctcagaagcttccacat
ggtgttgagcctgcaagtgcaccgaagtcaagaattggggtttggaaacctctacctaga
cttcagaagatgtatggaaacacctggatgtccaggcagaagtttgctgcagggatgggg
tgctcatggagaacttctgatagggcagtgcaggagggaaaagtggggttggaaccccca
cacagagtccctactggggcactgcctagtggagctgtgagaagagggccaccaccctcc
agactccagaatggtagatctaccaacagcttgcaccatttgcctggaaaagccacagac
actcaataccagcctgtgaaagtagctgagaaggaggctgtactctgcaaagccacaggg
tcagagctgcccaagaccatgggaatgcacttcttgcatcagtgtgacctggatatgaga
ccagagtcaaaggagatcattttggagctttaa

>gi568815589r:104435773_104636813|GENSCAN_predicted_peptide_11|71_aa
MPVFTELQAAEPERAVTFPGGSDLGTPRAKAVTSLGGLRLLASPSFRVPPPRLDASAQHG
SCCGTLSPAAG

>gi568815589r:104435773_104636813|GENSCAN_predicted_CDS_11|216_bp
atgcccgtgttcactgagctgcaggcggcagaaccagagagagctgtaacatttcctggg
ggctcagacctcgggactcccagagcaaaagctgtaacatcccttgggggtctgcggttg
ctggcatctccaagttttcgggtgccaccacctcgtctagacgccagtgcccaacacgga
agctgctgtggcacgctgagtccagccgcaggctga