Result of FASTA (omim) for pF1KE0820
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0820, 194 aa
  1>>>pF1KE0820 194 - 194 aa - 194 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9605+/-0.000474; mu= 15.1341+/- 0.029
 mean_var=72.1157+/-15.421, 0's: 0 Z-trim(108.8): 31  B-trim: 0 in 0/49
 Lambda= 0.151029
 statistics sampled from 16902 (16927) to 16902 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.563), E-opt: 0.2 (0.198), width:  16
 Scan time:  4.820

The best scores are:                                      opt bits E(85289)
NP_003688 (OMIM: 608492) olfactory receptor 5F1 [H ( 314)  626 145.9   6e-35
NP_006628 (OMIM: 608496) olfactory receptor 5I1 [H ( 314)  605 141.4 1.4e-33
NP_001004729 (OMIM: 615702) olfactory receptor 5AN ( 311)  592 138.5   1e-32
NP_003691 (OMIM: 608494) olfactory receptor 2D2 [H ( 308)  540 127.2 2.6e-29
XP_011514322 (OMIM: 608497) PREDICTED: olfactory r ( 317)  540 127.2 2.7e-29
XP_011514321 (OMIM: 608497) PREDICTED: olfactory r ( 317)  540 127.2 2.7e-29
NP_036501 (OMIM: 608497) olfactory receptor 2F1 [H ( 317)  540 127.2 2.7e-29
NP_003687 (OMIM: 608495) olfactory receptor 6A2 [H ( 327)  530 125.0 1.2e-28
NP_001005216 (OMIM: 615016,615082) olfactory recep ( 311)  529 124.8 1.4e-28
NP_036492 (OMIM: 603232) olfactory receptor 1F1 [H ( 312)  517 122.2 8.5e-28
XP_011520809 (OMIM: 603232) PREDICTED: olfactory r ( 312)  517 122.2 8.5e-28
XP_011520808 (OMIM: 603232) PREDICTED: olfactory r ( 322)  517 122.2 8.7e-28
NP_001005487 (OMIM: 611677) olfactory receptor 13G ( 307)  513 121.3 1.5e-27
NP_835462 (OMIM: 608493) olfactory receptor 10A5 [ ( 317)  504 119.4 6.1e-27
NP_009091 (OMIM: 600578) olfactory receptor 2H2 [H ( 312)  499 118.3 1.3e-26
NP_001004703 (OMIM: 614273) olfactory receptor 4C4 ( 309)  490 116.3   5e-26
NP_001001957 (OMIM: 616729) olfactory receptor 2W3 ( 314)  483 114.8 1.4e-25
XP_011513214 (OMIM: 600578) PREDICTED: olfactory r ( 300)  469 111.7 1.2e-24
NP_001005191 (OMIM: 611538) olfactory receptor 7D4 ( 312)  432 103.7 3.2e-22
NP_002539 (OMIM: 164342) olfactory receptor 1D2 [H ( 312)  423 101.7 1.2e-21
NP_689643 (OMIM: 611267) olfactory receptor 51E1 [ ( 318)  297 74.3 2.3e-13
NP_110401 (OMIM: 611268) olfactory receptor 51E2 [ ( 320)  287 72.1 1.1e-12


>>NP_003688 (OMIM: 608492) olfactory receptor 5F1 [Homo   (314 aa)
 initn: 664 init1: 471 opt: 626  Z-score: 748.4  bits: 145.9 E(85289): 6e-35
Smith-Waterman score: 626; 50.5% identity (80.7% similar) in 192 aa overlap (1-192:118-308)

                                             10        20        30
pF1KE0                               MPYDRYVAICNPLIYTAIMTQRVCRELVIG
                                     : ::::.::: ::.:. ::.. :  ... :
NP_003 EKKTISFAGCFLQMYFFISLATTECILFGLMAYDRYAAICRPLLYSLIMSRTVYLKMAAG
        90       100       110       120       130       140       

               40        50        60        70        80        90
pF1KE0 VYTYGFRNSVIQTALTFQLSFCNSDVIHHFYCADPPLLALSCSDTHNKEKQLMIFSAVNL
       ... :. : ...:. . .::::.:.:::::.: .:::. ::::::  ::.   :...::.
NP_003 AFAAGLLNFMVNTSHVSSLSFCDSNVIHHFFCDSPPLFKLSCSDTILKESISSILAGVNI
       150       160       170       180       190       200       

              100       110       120       130       140       150
pF1KE0 TGSLLTIFISYICILFSIIKIQSSEGKCRAFSTRASHLTVVTIFYGTLFFMYLQQPKAGN
       .:.::.:. ::  .::::....:.::. ::::: :::::.. .::.: .. ::. :... 
NP_003 VGTLLVILSSYSYVLFSIFSMHSGEGRHRAFSTCASHLTAIILFYATCIYTYLR-PSSSY
       210       220       230       240       250       260       

              160       170       180       190        
pF1KE0 SWKPNKVVSVFYSLVIPMLNPLIYRLRNTEVKDALKKMLEGKEL    
       : . .::.::::..:::::::::: ::. ::: :: ...  :      
NP_003 SLNQDKVASVFYTVVIPMLNPLIYSLRSKEVKKALANVISRKRTSSFL
        270       280       290       300       310    

>>NP_006628 (OMIM: 608496) olfactory receptor 5I1 [Homo   (314 aa)
 initn: 578 init1: 447 opt: 605  Z-score: 723.6  bits: 141.4 E(85289): 1.4e-33
Smith-Waterman score: 605; 47.9% identity (77.6% similar) in 192 aa overlap (1-192:120-310)

                                             10        20        30
pF1KE0                               MPYDRYVAICNPLIYTAIMTQRVCRELVIG
                                     : :::::::::::.::..:.. .: .:.. 
NP_006 ENKSISYYGCALQFYFFCTFADTESFILAAMAYDRYVAICNPLLYTVVMSRGICMRLIVL
      90       100       110       120       130       140         

               40        50        60        70        80        90
pF1KE0 VYTYGFRNSVIQTALTFQLSFCNSDVIHHFYCADPPLLALSCSDTHNKEKQLMIFSAVNL
        :  :  .:...:...: :..:...::.::.:  :::: :::.::  .:  :  ...   
NP_006 SYLGGNMSSLVHTSFAFILKYCDKNVINHFFCDLPPLLKLSCTDTTINEWLLSTYGSSVE
     150       160       170       180       190       200         

              100       110       120       130       140       150
pF1KE0 TGSLLTIFISYICILFSIIKIQSSEGKCRAFSTRASHLTVVTIFYGTLFFMYLQQPKAGN
          .. :.:::. ::.:..::.:  :. ..::: ::::: :::. :::.:.: ..:.   
NP_006 IICFIIIIISYFFILLSVLKIRSFSGRKKTFSTCASHLTSVTIYQGTLLFIY-SRPSYLY
     210       220       230       240       250       260         

              160       170       180       190      
pF1KE0 SWKPNKVVSVFYSLVIPMLNPLIYRLRNTEVKDALKKMLEGKEL  
       : . .:..::::.. ::.:::::: ::: .:::: .:.:..:    
NP_006 SPNTDKIISVFYTIFIPVLNPLIYSLRNKDVKDAAEKVLRSKVDSS
      270       280       290       300       310    

>>NP_001004729 (OMIM: 615702) olfactory receptor 5AN1 [H  (311 aa)
 initn: 584 init1: 437 opt: 592  Z-score: 708.4  bits: 138.5 E(85289): 1e-32
Smith-Waterman score: 592; 48.4% identity (76.6% similar) in 192 aa overlap (1-192:119-309)

                                             10        20        30
pF1KE0                               MPYDRYVAICNPLIYTAIMTQRVCRELVIG
                                     : ::::.::::::.:..::.  .:  .:.:
NP_001 EQQTITFVGCIIQYFIFSTMGLSESCLMTAMAYDRYAAICNPLLYSSIMSPTLCVWMVLG
       90       100       110       120       130       140        

               40        50        60        70        80        90
pF1KE0 VYTYGFRNSVIQTALTFQLSFCNSDVIHHFYCADPPLLALSCSDTHNKEKQLMIFSAVNL
       .:  :.  :..: .  .:: ::.:.::.::.:  : :: :::.::   . .  :..    
NP_001 AYMTGLTASLFQIGALLQLHFCGSNVIRHFFCDMPQLLILSCTDTFFVQVMTAILTMFFG
      150       160       170       180       190       200        

              100       110       120       130       140       150
pF1KE0 TGSLLTIFISYICILFSIIKIQSSEGKCRAFSTRASHLTVVTIFYGTLFFMYLQQPKAGN
        .: :.:.:::  : .::.:: :..:. .::.: :::::.:..:: . .:.::.. ..:.
NP_001 IASALVIMISYGYIGISIMKITSAKGRSKAFNTCASHLTAVSLFYTSGIFVYLSSSSGGS
      210       220       230       240       250       260        

              160       170       180       190    
pF1KE0 SWKPNKVVSVFYSLVIPMLNPLIYRLRNTEVKDALKKMLEGKEL
       : . .. .::::..:::::::::: ::: :.:::::.. . :  
NP_001 S-SFDRFASVFYTVVIPMLNPLIYSLRNKEIKDALKRLQKRKCC
       270       280       290       300       310 

>>NP_003691 (OMIM: 608494) olfactory receptor 2D2 [Homo   (308 aa)
 initn: 523 init1: 394 opt: 540  Z-score: 647.2  bits: 127.2 E(85289): 2.6e-29
Smith-Waterman score: 540; 46.3% identity (73.4% similar) in 188 aa overlap (1-188:118-302)

                                             10        20        30
pF1KE0                               MPYDRYVAICNPLIYTAIMTQRVCRELVIG
                                     : ::::::::::: :  ::: .:: .:. :
NP_003 RKKVIAFTLCAARLLFFLIFGCTQCALLAVMSYDRYVAICNPLRYPNIMTWKVCVQLATG
        90       100       110       120       130       140       

               40        50        60        70        80        90
pF1KE0 VYTYGFRNSVIQTALTFQLSFCNSDVIHHFYCADPPLLALSCSDTHNKEKQLMIFSAVNL
        .: :.  ::..:.. ..: . .:. : ::.:  : :: :. .::: .:  ......: :
NP_003 SWTSGILVSVVDTTFILRLPYRGSNSIAHFFCEAPALLILASTDTHASEMAIFLMGVVIL
       150       160       170       180       190       200       

              100       110       120       130       140       150
pF1KE0 TGSLLTIFISYICILFSIIKIQSSEGKCRAFSTRASHLTVVTIFYGTLFFMYLQQPKAGN
          .. :..::  :. ...:..:. :. .:::: .::: :: .:::. .. :.  ::  .
NP_003 LIPVFLILVSYGRIIVTVVKMKSTVGSLKAFSTCGSHLMVVILFYGSAIITYMT-PK--S
       210       220       230       240       250       260       

              160       170       180       190    
pF1KE0 SWKPNKVVSVFYSLVIPMLNPLIYRLRNTEVKDALKKMLEGKEL
       : . .: :::::..: :::::::: ::: .:: ::.:.      
NP_003 SKQQEKSVSVFYAIVTPMLNPLIYSLRNKDVKAALRKVATRNFP
          270       280       290       300        

>>XP_011514322 (OMIM: 608497) PREDICTED: olfactory recep  (317 aa)
 initn: 539 init1: 397 opt: 540  Z-score: 647.0  bits: 127.2 E(85289): 2.7e-29
Smith-Waterman score: 540; 46.6% identity (70.9% similar) in 189 aa overlap (1-189:118-305)

                                             10        20        30
pF1KE0                               MPYDRYVAICNPLIYTAIMTQRVCRELVIG
                                     : ::::::.:. : :.:::   .: .:.: 
XP_011 EHKAIPFQSCAAQLFFSLALGGIEFVLLAVMAYDRYVAVCDALRYSAIMHGGLCARLAIT
        90       100       110       120       130       140       

               40        50        60        70        80        90
pF1KE0 VYTYGFRNSVIQTALTFQLSFCNSDVIHHFYCADPPLLALSCSDTHNKEKQLMIFSAVNL
        .. :: .: .:::.:::: .: .  : :. :    .. :.: :: ..:  .:. : : :
XP_011 SWVSGFISSPVQTAITFQLPMCRNKFIDHISCELLAVVRLACVDTSSNEVTIMVSSIVLL
       150       160       170       180       190       200       

              100       110       120       130       140       150
pF1KE0 TGSLLTIFISYICILFSIIKIQSSEGKCRAFSTRASHLTVVTIFYGTLFFMYLQQPKAGN
          .  ...::: :. .:.:::: ::. .:: : :::::::.. ::. .: :.: :... 
XP_011 MTPFCLVLLSYIQIISTILKIQSREGRKKAFHTCASHLTVVALCYGVAIFTYIQ-PHSSP
       210       220       230       240       250       260       

              160       170       180       190           
pF1KE0 SWKPNKVVSVFYSLVIPMLNPLIYRLRNTEVKDALKKMLEGKEL       
       :   .:. ::::... :::::.:: ::: ::: : .:.:            
XP_011 SVLQEKLFSVFYAILTPMLNPMIYSLRNKEVKGAWQKLLWKFSGLTSKLAT
        270       280       290       300       310       

>>XP_011514321 (OMIM: 608497) PREDICTED: olfactory recep  (317 aa)
 initn: 539 init1: 397 opt: 540  Z-score: 647.0  bits: 127.2 E(85289): 2.7e-29
Smith-Waterman score: 540; 46.6% identity (70.9% similar) in 189 aa overlap (1-189:118-305)

                                             10        20        30
pF1KE0                               MPYDRYVAICNPLIYTAIMTQRVCRELVIG
                                     : ::::::.:. : :.:::   .: .:.: 
XP_011 EHKAIPFQSCAAQLFFSLALGGIEFVLLAVMAYDRYVAVCDALRYSAIMHGGLCARLAIT
        90       100       110       120       130       140       

               40        50        60        70        80        90
pF1KE0 VYTYGFRNSVIQTALTFQLSFCNSDVIHHFYCADPPLLALSCSDTHNKEKQLMIFSAVNL
        .. :: .: .:::.:::: .: .  : :. :    .. :.: :: ..:  .:. : : :
XP_011 SWVSGFISSPVQTAITFQLPMCRNKFIDHISCELLAVVRLACVDTSSNEVTIMVSSIVLL
       150       160       170       180       190       200       

              100       110       120       130       140       150
pF1KE0 TGSLLTIFISYICILFSIIKIQSSEGKCRAFSTRASHLTVVTIFYGTLFFMYLQQPKAGN
          .  ...::: :. .:.:::: ::. .:: : :::::::.. ::. .: :.: :... 
XP_011 MTPFCLVLLSYIQIISTILKIQSREGRKKAFHTCASHLTVVALCYGVAIFTYIQ-PHSSP
       210       220       230       240       250       260       

              160       170       180       190           
pF1KE0 SWKPNKVVSVFYSLVIPMLNPLIYRLRNTEVKDALKKMLEGKEL       
       :   .:. ::::... :::::.:: ::: ::: : .:.:            
XP_011 SVLQEKLFSVFYAILTPMLNPMIYSLRNKEVKGAWQKLLWKFSGLTSKLAT
        270       280       290       300       310       

>>NP_036501 (OMIM: 608497) olfactory receptor 2F1 [Homo   (317 aa)
 initn: 539 init1: 397 opt: 540  Z-score: 647.0  bits: 127.2 E(85289): 2.7e-29
Smith-Waterman score: 540; 46.6% identity (70.9% similar) in 189 aa overlap (1-189:118-305)

                                             10        20        30
pF1KE0                               MPYDRYVAICNPLIYTAIMTQRVCRELVIG
                                     : ::::::.:. : :.:::   .: .:.: 
NP_036 EHKAIPFQSCAAQLFFSLALGGIEFVLLAVMAYDRYVAVCDALRYSAIMHGGLCARLAIT
        90       100       110       120       130       140       

               40        50        60        70        80        90
pF1KE0 VYTYGFRNSVIQTALTFQLSFCNSDVIHHFYCADPPLLALSCSDTHNKEKQLMIFSAVNL
        .. :: .: .:::.:::: .: .  : :. :    .. :.: :: ..:  .:. : : :
NP_036 SWVSGFISSPVQTAITFQLPMCRNKFIDHISCELLAVVRLACVDTSSNEVTIMVSSIVLL
       150       160       170       180       190       200       

              100       110       120       130       140       150
pF1KE0 TGSLLTIFISYICILFSIIKIQSSEGKCRAFSTRASHLTVVTIFYGTLFFMYLQQPKAGN
          .  ...::: :. .:.:::: ::. .:: : :::::::.. ::. .: :.: :... 
NP_036 MTPFCLVLLSYIQIISTILKIQSREGRKKAFHTCASHLTVVALCYGVAIFTYIQ-PHSSP
       210       220       230       240       250       260       

              160       170       180       190           
pF1KE0 SWKPNKVVSVFYSLVIPMLNPLIYRLRNTEVKDALKKMLEGKEL       
       :   .:. ::::... :::::.:: ::: ::: : .:.:            
NP_036 SVLQEKLFSVFYAILTPMLNPMIYSLRNKEVKGAWQKLLWKFSGLTSKLAT
        270       280       290       300       310       

>>NP_003687 (OMIM: 608495) olfactory receptor 6A2 [Homo   (327 aa)
 initn: 563 init1: 381 opt: 530  Z-score: 635.1  bits: 125.0 E(85289): 1.2e-28
Smith-Waterman score: 530; 44.9% identity (71.9% similar) in 185 aa overlap (1-185:123-306)

                                             10        20        30
pF1KE0                               MPYDRYVAICNPLIYTAIMTQRVCRELVIG
                                     : ::::.::: :: : .:.. :.: ... :
NP_003 HGQLISFEGCMTQLYFFLGLGCTECVLLAVMAYDRYMAICYPLHYPVIVSGRLCVQMAAG
            100       110       120       130       140       150  

               40        50        60        70        80        90
pF1KE0 VYTYGFRNSVIQTALTFQLSFCNSDVIHHFYCADPPLLALSCSDTHNKEKQLMIFSAVNL
        .. ::  :.... :   ::.:. ..:.::.:   ::: :::.:  . :   .:..   :
NP_003 SWAGGFGISMVKVFLISGLSYCGPNIINHFFCDVSPLLNLSCTDMSTAELTDFILAIFIL
            160       170       180       190       200       210  

              100       110       120       130       140       150
pF1KE0 TGSLLTIFISYICILFSIIKIQSSEGKCRAFSTRASHLTVVTIFYGTLFFMYLQQPKAGN
        : : .   ::. :  ....: :. :. .:::: ::::::: :::.. .:.:  .::: .
NP_003 LGPLSVTGASYVAITGAVMHIPSAAGRYKAFSTCASHLTVVIIFYAASIFIY-ARPKALS
            220       230       240       250       260        270 

              160       170       180       190                
pF1KE0 SWKPNKVVSVFYSLVIPMLNPLIYRLRNTEVKDALKKMLEGKEL            
       ..  ::.:::.:....:.:::.:: ::: ::: ::                     
NP_003 AFDTNKLVSVLYAVIVPLLNPIIYCLRNQEVKRALCCTLHLYQHQDPDPKKASRNV
             280       290       300       310       320       

>>NP_001005216 (OMIM: 615016,615082) olfactory receptor   (311 aa)
 initn: 555 init1: 394 opt: 529  Z-score: 634.2  bits: 124.8 E(85289): 1.4e-28
Smith-Waterman score: 529; 41.8% identity (70.9% similar) in 189 aa overlap (1-189:121-308)

                                             10        20        30
pF1KE0                               MPYDRYVAICNPLIYTAIMTQRVCRELVIG
                                     : ::::.:.: :: ::..:  : :. :...
NP_001 PEKTISYAGCMIQLYFVLALGTTECVLLVVMSYDRYAAVCRPLHYTVLMHPRFCHLLAVA
              100       110       120       130       140       150

               40        50        60        70        80        90
pF1KE0 VYTYGFRNSVIQTALTFQLSFCNSDVIHHFYCADPPLLALSCSDTHNKEKQLMIFSAVNL
        .. :: ::......:: . .:.   . ::.:  : :: ::: ::: .:  ::: :.. .
NP_001 SWVSGFTNSALHSSFTFWVPLCGHRQVDHFFCEVPALLRLSCVDTHVNELTLMITSSIFV
              160       170       180       190       200       210

              100       110       120       130       140       150
pF1KE0 TGSLLTIFISYICILFSIIKIQSSEGKCRAFSTRASHLTVVTIFYGTLFFMYLQQPKAGN
          :. :. ::  :. .:...::. :  ..:.: ..:: .:..:.   . :::: : .::
NP_001 LIPLILILTSYGAIVRAILRMQSTTGLQKVFGTCGAHLMAVSLFFIPAMCMYLQ-PPSGN
              220       230       240       250       260          

              160       170       180       190    
pF1KE0 SWKPNKVVSVFYSLVIPMLNPLIYRLRNTEVKDALKKMLEGKEL
       :   .: ...::..: : :::::: :::  :. :.:...     
NP_001 SQDQGKFIALFYTVVTPSLNPLIYTLRNKVVRGAVKRLMGWE  
     270       280       290       300       310   

>>NP_036492 (OMIM: 603232) olfactory receptor 1F1 [Homo   (312 aa)
 initn: 490 init1: 389 opt: 517  Z-score: 620.0  bits: 122.2 E(85289): 8.5e-28
Smith-Waterman score: 517; 42.9% identity (74.1% similar) in 189 aa overlap (1-189:118-305)

                                             10        20        30
pF1KE0                               MPYDRYVAICNPLIYTAIMTQRVCRELVIG
                                     : ::..::.:.:: ::: ::...:  :: :
NP_036 ETQTISFCGCLTQMYFVFMFVDMDNFLLAVMAYDHFVAVCHPLHYTAKMTHQLCALLVAG
        90       100       110       120       130       140       

               40        50        60        70        80        90
pF1KE0 VYTYGFRNSVIQTALTFQLSFCNSDVIHHFYCADPPLLALSCSDTHNKEKQLMIFSAVNL
       ... .  : ...: :   :::: ...: ::.:   ::: ::::::: .:  ..  .:. .
NP_036 LWVVANLNVLLHTLLMAPLSFCADNAITHFFCDVTPLLKLSCSDTHLNEVIILSEGALVM
       150       160       170       180       190       200       

              100       110       120       130       140       150
pF1KE0 TGSLLTIFISYICILFSIIKIQSSEGKCRAFSTRASHLTVVTIFYGTLFFMYLQQPKAGN
          .: :. ::. :  ...:. :..:. .:::: .:::.:: .::.:.. .:.. : ...
NP_036 ITPFLCILASYMHITCTVLKVPSTKGRWKAFSTCGSHLAVVLLFYSTIIAVYFN-PLSSH
       210       220       230       240       250       260       

              160       170       180       190      
pF1KE0 SWKPNKVVSVFYSLVIPMLNPLIYRLRNTEVKDALKKMLEGKEL  
       : . . ...:.:..: :::::.:: :::  .: ::::..       
NP_036 SAEKDTMATVLYTVVTPMLNPFIYSLRNRYLKGALKKVVGRVVFSV
        270       280       290       300       310  




194 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 03:20:42 2016 done: Sat Nov  5 03:20:43 2016
 Total Scan time:  4.820 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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