Result of FASTA (ccds) for pF1KE0795
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0795, 358 aa
  1>>>pF1KE0795 358 - 358 aa - 358 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.4745+/-0.000783; mu= 7.3726+/- 0.047
 mean_var=145.3242+/-28.074, 0's: 0 Z-trim(113.4): 85  B-trim: 221 in 1/50
 Lambda= 0.106391
 statistics sampled from 13898 (14001) to 13898 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.43), width:  16
 Scan time:  3.290

The best scores are:                                      opt bits E(32554)
CCDS11705.1 SLC9A3R1 gene_id:9368|Hs108|chr17      ( 358) 2370 374.9 5.8e-104
CCDS45382.1 SLC9A3R2 gene_id:9351|Hs108|chr16      ( 337)  999 164.5 1.2e-40
CCDS45383.1 SLC9A3R2 gene_id:9351|Hs108|chr16      ( 326)  998 164.3 1.3e-40
CCDS58407.1 SLC9A3R2 gene_id:9351|Hs108|chr16      ( 226)  598 102.8   3e-22
CCDS72859.1 PDZK1 gene_id:5174|Hs108|chr1          ( 408)  482 85.2 1.1e-16
CCDS8417.1 PDZD3 gene_id:79849|Hs108|chr11         ( 491)  426 76.6 4.9e-14
CCDS53719.1 PDZD3 gene_id:79849|Hs108|chr11        ( 505)  426 76.6   5e-14


>>CCDS11705.1 SLC9A3R1 gene_id:9368|Hs108|chr17           (358 aa)
 initn: 2370 init1: 2370 opt: 2370  Z-score: 1980.0  bits: 374.9 E(32554): 5.8e-104
Smith-Waterman score: 2370; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)

               10        20        30        40        50        60
pF1KE0 MSADAAAGAPLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MSADAAAGAPLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 EVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQKLGVQVREELLRAQEAPGQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQKLGVQVREELLRAQEAPGQA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 EPPAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKGPSGYGFNLHSDKSKPGQFIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EPPAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKGPSGYGFNLHSDKSKPGQFIR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 SVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 KCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESPRPALVRSASSDTSEELNSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESPRPALVRSASSDTSEELNSQ
              250       260       270       280       290       300

              310       320       330       340       350        
pF1KE0 DSPPKQDSTAPSSTSSSDPILDFNISLAMAKERAHQKRSSKRAPQMDWSKKNELFSNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DSPPKQDSTAPSSTSSSDPILDFNISLAMAKERAHQKRSSKRAPQMDWSKKNELFSNL
              310       320       330       340       350        

>>CCDS45382.1 SLC9A3R2 gene_id:9351|Hs108|chr16           (337 aa)
 initn: 1083 init1: 966 opt: 999  Z-score: 843.1  bits: 164.5 E(32554): 1.2e-40
Smith-Waterman score: 1104; 52.1% identity (72.0% similar) in 361 aa overlap (6-358:2-337)

               10         20        30        40        50         
pF1KE0 MSADAAAGAPL-PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRL
            ::  :: :::: : .: .:::::::::::. ::.:: :::::::: :.: :::::
CCDS45     MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRL
                   10        20        30        40        50      

      60        70        80        90       100       110         
pF1KE0 VEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQKLGVQVREELLRAQEA-PG
       ::::: ::: :::.:::.::.:. . .:::::: ::::.:..  .   ::.  ::.. : 
CCDS45 VEVNGVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEM--AQRGLPP
         60        70        80        90       100         110    

      120         130       140       150       160       170      
pF1KE0 QAEP--PAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKGPSGYGFNLHSDKSKPG
         .:  :    .. ... .:  . : : :  :::::::: ..:::.:::::::::::.::
CCDS45 AHDPWEPKPDWAHTGSHSSEAGKKDVSGP-LRELRPRLCHLRKGPQGYGFNLHSDKSRPG
          120       130       140        150       160       170   

        180       190       200       210       220       230      
pF1KE0 QFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETD
       :.:::::: :::  ::::::::..::::  .:: .:..::..:.:  ::..::::: :::
CCDS45 QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETD
           180       190       200       210       220       230   

        240       250       260       270       280       290      
pF1KE0 EFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESPRPALVRSASSDTSEE
       : ::. :: :..::..:::: : :::                    :: . ..:. .:. 
CCDS45 EHFKRLRVTPTEEHVEGPLPSPVTNGT------------------SPAQLNGGSACSSR-
           240       250       260                         270     

        300       310       320           330       340       350  
pF1KE0 LNSQDSPPKQDSTAPSSTSSSDPILDFNISL----AMAKERAHQKRSSKRAPQMDWSKKN
          .: : .. .:  .:. ..::. . .. :    : :::.:.  : .::::::::..: 
CCDS45 ---SDLPGSDKDTEDGSAWKQDPFQESGLHLSPTAAEAKEKARAMRVNKRAPQMDWNRKR
             280       290       300       310       320       330 

             
pF1KE0 ELFSNL
       :.:::.
CCDS45 EIFSNF
             

>>CCDS45383.1 SLC9A3R2 gene_id:9351|Hs108|chr16           (326 aa)
 initn: 1083 init1: 966 opt: 998  Z-score: 842.5  bits: 164.3 E(32554): 1.3e-40
Smith-Waterman score: 1084; 52.1% identity (71.1% similar) in 357 aa overlap (6-358:2-326)

               10         20        30        40        50         
pF1KE0 MSADAAAGAPL-PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRL
            ::  :: :::: : .: .:::::::::::. ::.:: :::::::: :.: :::::
CCDS45     MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRL
                   10        20        30        40        50      

      60        70        80        90       100       110         
pF1KE0 VEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQKLGVQVREELLRAQEA-PG
       ::::: ::: :::.:::.::.:. . .:::::: ::::.:..  .   ::.  ::.. : 
CCDS45 VEVNGVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEM--AQRGLPP
         60        70        80        90       100         110    

      120         130       140       150       160       170      
pF1KE0 QAEP--PAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKGPSGYGFNLHSDKSKPG
         .:  :    .. ... .:  . : : :  :::::::: ..:::.:::::::::::.::
CCDS45 AHDPWEPKPDWAHTGSHSSEAGKKDVSGP-LRELRPRLCHLRKGPQGYGFNLHSDKSRPG
          120       130       140        150       160       170   

        180       190       200       210       220       230      
pF1KE0 QFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETD
       :.:::::: :::  ::::::::..::::  .:: .:..::..:.:  ::..::::: :::
CCDS45 QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETD
           180       190       200       210       220       230   

        240       250       260       270       280       290      
pF1KE0 EFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESPRPALVRSASSDTSEE
       : ::. :: :..::..:::: : :::                    :: . ..:. .:. 
CCDS45 EHFKRLRVTPTEEHVEGPLPSPVTNGT------------------SPAQLNGGSACSSR-
           240       250       260                         270     

        300       310       320       330       340       350      
pF1KE0 LNSQDSPPKQDSTAPSSTSSSDPILDFNISLAMAKERAHQKRSSKRAPQMDWSKKNELFS
          .: : .. .:  :.       : .. . : :::.:.  : .::::::::..: :.::
CCDS45 ---SDLPGSDKDTEESG-------LHLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFS
             280              290       300       310       320    

         
pF1KE0 NL
       :.
CCDS45 NF
         

>>CCDS58407.1 SLC9A3R2 gene_id:9351|Hs108|chr16           (226 aa)
 initn: 677 init1: 560 opt: 598  Z-score: 512.9  bits: 102.8 E(32554): 3e-22
Smith-Waterman score: 703; 49.0% identity (69.6% similar) in 247 aa overlap (118-358:5-226)

        90       100       110       120       130         140     
pF1KE0 LLVVDPETDEQLQKLGVQVREELLRAQEAPGQAEPPAAAEVQGAGNENEPRE--ADKSHP
                                     :.: ::: :   ::  .. :..   : : :
CCDS58                           MARSGSATPPARA--PGAPPRSPPQRLVQDVSGP
                                         10          20        30  

         150       160       170       180       190       200     
pF1KE0 EQRELRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGV
         :::::::: ..:::.:::::::::::.:::.:::::: :::  ::::::::..:::: 
CCDS58 -LRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQ
              40        50        60        70        80        90 

         210       220       230       240       250       260     
pF1KE0 CMEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNGEIQ
        .:: .:..::..:.:  ::..::::: :::: ::. :: :..::..:::: : :::   
CCDS58 NVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLRVTPTEEHVEGPLPSPVTNGT--
             100       110       120       130       140           

         270       280       290       300       310       320     
pF1KE0 KENSREALAEAALESPRPALVRSASSDTSEELNSQDSPPKQDSTAPSSTSSSDPILDFNI
                        :: . ..:. .:.    .: : .. .:  .:. ..::. . ..
CCDS58 ----------------SPAQLNGGSACSSR----SDLPGSDKDTEDGSAWKQDPFQESGL
                     150       160           170       180         

             330       340       350        
pF1KE0 SL----AMAKERAHQKRSSKRAPQMDWSKKNELFSNL
        :    : :::.:.  : .::::::::..: :.:::.
CCDS58 HLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFSNF
     190       200       210       220      

>>CCDS72859.1 PDZK1 gene_id:5174|Hs108|chr1               (408 aa)
 initn: 511 init1: 246 opt: 482  Z-score: 413.0  bits: 85.2 E(32554): 1.1e-16
Smith-Waterman score: 488; 34.0% identity (61.2% similar) in 291 aa overlap (12-302:133-406)

                                  10        20        30        40 
pF1KE0                    MSADAAAGAPLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRL
                                     :::: : :  ..::: :   :   :: :. 
CCDS72 KELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGSYGFSL---KTVQGQIIKD
            110       120       130       140          150         

              50        60        70        80        90       100 
pF1KE0 VEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQK
       .. :::::.:::  .: .: ::::.::   :..::  :: . . . ::::: :::. . .
CCDS72 IDSGSPAEEAGLKNNDLVVAVNGESVETLDHDSVVEMIRKGGDQTSLLVVDKETDN-MYR
     160       170       180       190       200       210         

             110       120       130       140       150       160 
pF1KE0 LGVQVREELLRAQEAPGQAEPPAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKGP
       :.        ..:: :. .   : : .  . . . : ..     :. . .:.:: . :: 
CCDS72 LAHFSPFLYYQSQELPNGSVKEAPAPTPTSLEVSSPPDTT----EEVDHKPKLCRLAKGE
      220       230       240       250           260       270    

             170       180       190       200       210       220 
pF1KE0 SGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRA
       .::::.:.. .. ::.::. :.  .::. .::. .: :.::::: .  . .  ::. :..
CCDS72 NGYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQS
          280       290       300       310       320       330    

             230       240       250       260       270       280 
pF1KE0 GGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESP
       .: .. :::  ... ..:.  . ::    :  :: .:         .:.:...  . .. 
CCDS72 SGKNVTLLVCGKKAYDYFQAKK-IPIVSSLADPLDTP--------PDSKEGIVVESNHDS
          340       350        360       370               380     

             290       300       310       320       330       340 
pF1KE0 RPALVRSASSDTSEELNSQDSPPKQDSTAPSSTSSSDPILDFNISLAMAKERAHQKRSSK
       . :  :. :. .    ::.:.                                       
CCDS72 HMAKERAHSTASHSSSNSEDTEM                                     
         390       400                                             

>>CCDS8417.1 PDZD3 gene_id:79849|Hs108|chr11              (491 aa)
 initn: 570 init1: 215 opt: 426  Z-score: 365.4  bits: 76.6 E(32554): 4.9e-14
Smith-Waterman score: 426; 41.7% identity (61.9% similar) in 218 aa overlap (1-210:233-444)

                                             10           20       
pF1KE0                               MSADAAAGAPLP---RLCCLEKGPNGYGFH
                                     ..:  : :  ::   :   :::::.:.:: 
CCDS84 VNGLWQSGQQVTLLVAGPEVEEQCRQLGLPLAAPLAEGWALPTKPRCLHLEKGPQGFGFL
            210       220       230       240       250       260  

        30           40        50        60        70        80    
pF1KE0 LHGEKG---KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALN
       :. :::   . ::..  :.:: ::.:::. :::::: : ::.::   :...::::..  .
CCDS84 LREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGS
            270       280       290       300       310       320  

           90       100       110        120       130       140   
pF1KE0 AVRLLVVDPETDEQLQKLGVQVREEL-LRAQEAPGQAEPPAAAEVQGAGNENEPREADKS
        : : :::::.:. ..   :..   : :.  :::  : : ... .. . .:. :   : :
CCDS84 CVSLTVVDPEADRFFSM--VRLSPLLFLENTEAP--ASPRGSSSASLVETED-PSLEDTS
            330         340       350         360       370        

           150       160        170       180       190       200  
pF1KE0 HPEQRELRPRLCTMKKGPSG-YGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEV
        : .  :  : : .  ::.: ::: :    : :  :: .: : . :  .::.. : :.::
CCDS84 VP-SVPLGSRQCFLYPGPGGSYGFRLSCVASGPRLFISQVTPGGSAARAGLQVGDVILEV
        380       390       400       410       420       430      

            210       220       230       240       250       260  
pF1KE0 NGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNG
       ::  . :.                                                    
CCDS84 NGYPVGGQNDLERLQQLPEAEPPLCLKLAARSLRGLEAWIPPGAAEDWALASDLL     
        440       450       460       470       480       490      

>>CCDS53719.1 PDZD3 gene_id:79849|Hs108|chr11             (505 aa)
 initn: 621 init1: 215 opt: 426  Z-score: 365.2  bits: 76.6 E(32554): 5e-14
Smith-Waterman score: 426; 41.7% identity (61.9% similar) in 218 aa overlap (1-210:247-458)

                                             10           20       
pF1KE0                               MSADAAAGAPLP---RLCCLEKGPNGYGFH
                                     ..:  : :  ::   :   :::::.:.:: 
CCDS53 TRKLWQSGQQVTLLVAGPEVEEQCRQLGLPLAAPLAEGWALPTKPRCLHLEKGPQGFGFL
        220       230       240       250       260       270      

        30           40        50        60        70        80    
pF1KE0 LHGEKG---KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALN
       :. :::   . ::..  :.:: ::.:::. :::::: : ::.::   :...::::..  .
CCDS53 LREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGS
        280       290       300       310       320       330      

           90       100       110        120       130       140   
pF1KE0 AVRLLVVDPETDEQLQKLGVQVREEL-LRAQEAPGQAEPPAAAEVQGAGNENEPREADKS
        : : :::::.:. ..   :..   : :.  :::  : : ... .. . .:. :   : :
CCDS53 CVSLTVVDPEADRFFSM--VRLSPLLFLENTEAP--ASPRGSSSASLVETED-PSLEDTS
        340       350         360         370       380        390 

           150       160        170       180       190       200  
pF1KE0 HPEQRELRPRLCTMKKGPSG-YGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEV
        : .  :  : : .  ::.: ::: :    : :  :: .: : . :  .::.. : :.::
CCDS53 VP-SVPLGSRQCFLYPGPGGSYGFRLSCVASGPRLFISQVTPGGSAARAGLQVGDVILEV
              400       410       420       430       440       450

            210       220       230       240       250       260  
pF1KE0 NGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNG
       ::  . :.                                                    
CCDS53 NGYPVGGQNDLERLQQLPEAEPPLCLKLAARSLRGLEAWIPPGAAEDWALASDLL     
              460       470       480       490       500          




358 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 03:11:52 2016 done: Sat Nov  5 03:11:52 2016
 Total Scan time:  3.290 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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