Result of FASTA (omim) for
pF1KE0716
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0716, 412 aa
1>>>pF1KE0716 412 - 412 aa - 412 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.0436+/-0.00036; mu= -3.1359+/- 0.023
mean_var=275.9410+/-55.488, 0's: 0 Z-trim(123.0): 49 B-trim: 51 in 1/55
Lambda= 0.077209
statistics sampled from 41963 (42012) to 41963 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.493), width: 16
Scan time: 9.240
The best scores are: opt bits E(85289)
NP_003965 (OMIM: 604997) docking protein 2 isoform ( 412) 2854 330.7 4e-90
XP_005273737 (OMIM: 604997) PREDICTED: docking pro ( 318) 2074 243.8 4.6e-64
NP_001304729 (OMIM: 604997) docking protein 2 isof ( 258) 1812 214.5 2.4e-55
NP_958728 (OMIM: 604997) docking protein 2 isoform ( 258) 1812 214.5 2.4e-55
XP_011532958 (OMIM: 611435) PREDICTED: docking pro ( 440) 677 88.3 4.1e-17
NP_001295164 (OMIM: 611435) docking protein 3 isof ( 440) 677 88.3 4.1e-17
XP_011532957 (OMIM: 611435) PREDICTED: docking pro ( 440) 677 88.3 4.1e-17
XP_005266042 (OMIM: 611435) PREDICTED: docking pro ( 440) 677 88.3 4.1e-17
XP_011532956 (OMIM: 611435) PREDICTED: docking pro ( 440) 677 88.3 4.1e-17
NP_001295165 (OMIM: 611435) docking protein 3 isof ( 440) 677 88.3 4.1e-17
NP_079148 (OMIM: 611435) docking protein 3 isoform ( 496) 677 88.3 4.5e-17
NP_001372 (OMIM: 602919) docking protein 1 isoform ( 481) 590 78.6 3.7e-14
NP_001305796 (OMIM: 602919) docking protein 1 isof ( 470) 530 71.9 3.7e-12
NP_001138347 (OMIM: 611435) docking protein 3 isof ( 330) 485 66.8 9.1e-11
XP_005266044 (OMIM: 611435) PREDICTED: docking pro ( 330) 485 66.8 9.1e-11
XP_011532959 (OMIM: 611435) PREDICTED: docking pro ( 338) 404 57.8 4.8e-08
XP_016865372 (OMIM: 611435) PREDICTED: docking pro ( 395) 404 57.8 5.4e-08
NP_001184189 (OMIM: 602919) docking protein 1 isof ( 342) 362 53.1 1.2e-06
NP_001305795 (OMIM: 602919) docking protein 1 isof ( 342) 362 53.1 1.2e-06
NP_001305797 (OMIM: 602919) docking protein 1 isof ( 177) 262 41.8 0.0017
>>NP_003965 (OMIM: 604997) docking protein 2 isoform a [ (412 aa)
initn: 2854 init1: 2854 opt: 2854 Z-score: 1739.1 bits: 330.7 E(85289): 4e-90
Smith-Waterman score: 2854; 100.0% identity (100.0% similar) in 412 aa overlap (1-412:1-412)
10 20 30 40 50 60
pF1KE0 MGDGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MGDGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 RLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAAERGDWVQAICLLAFPGQRKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAAERGDWVQAICLLAFPGQRKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LSGPEGKQSRPCMEENELYSSAVTVGPHKEFAVTMRPTEASERCHLRGSYTLRAGESALE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LSGPEGKQSRPCMEENELYSSAVTVGPHKEFAVTMRPTEASERCHLRGSYTLRAGESALE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LWGGPEPGTQLYDWPYRFLRRFGRDKVTFSFEAGRRCVSGEGNFEFETRQGNEIFLALEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LWGGPEPGTQLYDWPYRFLRRFGRDKVTFSFEAGRRCVSGEGNFEFETRQGNEIFLALEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 AISAQKNAAPATPQPQPATIPASLPRPDSPYSRPHDSLPPPSPTTPVPAPRPRGQEGEYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 AISAQKNAAPATPQPQPATIPASLPRPDSPYSRPHDSLPPPSPTTPVPAPRPRGQEGEYA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 VPFDAVARSLGKNFRGILAVPPQLLADPLYDSIEETLPPRPDHIYDEPEGVAALSLYDSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VPFDAVARSLGKNFRGILAVPPQLLADPLYDSIEETLPPRPDHIYDEPEGVAALSLYDSP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 QEPRGEAWRRQATADRDPAGLQHVQPAGQDFSASGWQPGTEYDNVVLKKGPK
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QEPRGEAWRRQATADRDPAGLQHVQPAGQDFSASGWQPGTEYDNVVLKKGPK
370 380 390 400 410
>>XP_005273737 (OMIM: 604997) PREDICTED: docking protein (318 aa)
initn: 2074 init1: 2074 opt: 2074 Z-score: 1271.1 bits: 243.8 E(85289): 4.6e-64
Smith-Waterman score: 2074; 100.0% identity (100.0% similar) in 297 aa overlap (116-412:22-318)
90 100 110 120 130 140
pF1KE0 LETKERLYLLAAPAAERGDWVQAICLLAFPGQRKELSGPEGKQSRPCMEENELYSSAVTV
::::::::::::::::::::::::::::::
XP_005 MGDGAVKQGFLYLQQQQTFGKGQRKELSGPEGKQSRPCMEENELYSSAVTV
10 20 30 40 50
150 160 170 180 190 200
pF1KE0 GPHKEFAVTMRPTEASERCHLRGSYTLRAGESALELWGGPEPGTQLYDWPYRFLRRFGRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPHKEFAVTMRPTEASERCHLRGSYTLRAGESALELWGGPEPGTQLYDWPYRFLRRFGRD
60 70 80 90 100 110
210 220 230 240 250 260
pF1KE0 KVTFSFEAGRRCVSGEGNFEFETRQGNEIFLALEEAISAQKNAAPATPQPQPATIPASLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KVTFSFEAGRRCVSGEGNFEFETRQGNEIFLALEEAISAQKNAAPATPQPQPATIPASLP
120 130 140 150 160 170
270 280 290 300 310 320
pF1KE0 RPDSPYSRPHDSLPPPSPTTPVPAPRPRGQEGEYAVPFDAVARSLGKNFRGILAVPPQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPDSPYSRPHDSLPPPSPTTPVPAPRPRGQEGEYAVPFDAVARSLGKNFRGILAVPPQLL
180 190 200 210 220 230
330 340 350 360 370 380
pF1KE0 ADPLYDSIEETLPPRPDHIYDEPEGVAALSLYDSPQEPRGEAWRRQATADRDPAGLQHVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ADPLYDSIEETLPPRPDHIYDEPEGVAALSLYDSPQEPRGEAWRRQATADRDPAGLQHVQ
240 250 260 270 280 290
390 400 410
pF1KE0 PAGQDFSASGWQPGTEYDNVVLKKGPK
:::::::::::::::::::::::::::
XP_005 PAGQDFSASGWQPGTEYDNVVLKKGPK
300 310
>>NP_001304729 (OMIM: 604997) docking protein 2 isoform (258 aa)
initn: 1812 init1: 1812 opt: 1812 Z-score: 1114.6 bits: 214.5 E(85289): 2.4e-55
Smith-Waterman score: 1812; 100.0% identity (100.0% similar) in 258 aa overlap (155-412:1-258)
130 140 150 160 170 180
pF1KE0 EGKQSRPCMEENELYSSAVTVGPHKEFAVTMRPTEASERCHLRGSYTLRAGESALELWGG
::::::::::::::::::::::::::::::
NP_001 MRPTEASERCHLRGSYTLRAGESALELWGG
10 20 30
190 200 210 220 230 240
pF1KE0 PEPGTQLYDWPYRFLRRFGRDKVTFSFEAGRRCVSGEGNFEFETRQGNEIFLALEEAISA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEPGTQLYDWPYRFLRRFGRDKVTFSFEAGRRCVSGEGNFEFETRQGNEIFLALEEAISA
40 50 60 70 80 90
250 260 270 280 290 300
pF1KE0 QKNAAPATPQPQPATIPASLPRPDSPYSRPHDSLPPPSPTTPVPAPRPRGQEGEYAVPFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKNAAPATPQPQPATIPASLPRPDSPYSRPHDSLPPPSPTTPVPAPRPRGQEGEYAVPFD
100 110 120 130 140 150
310 320 330 340 350 360
pF1KE0 AVARSLGKNFRGILAVPPQLLADPLYDSIEETLPPRPDHIYDEPEGVAALSLYDSPQEPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVARSLGKNFRGILAVPPQLLADPLYDSIEETLPPRPDHIYDEPEGVAALSLYDSPQEPR
160 170 180 190 200 210
370 380 390 400 410
pF1KE0 GEAWRRQATADRDPAGLQHVQPAGQDFSASGWQPGTEYDNVVLKKGPK
::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEAWRRQATADRDPAGLQHVQPAGQDFSASGWQPGTEYDNVVLKKGPK
220 230 240 250
>>NP_958728 (OMIM: 604997) docking protein 2 isoform b [ (258 aa)
initn: 1812 init1: 1812 opt: 1812 Z-score: 1114.6 bits: 214.5 E(85289): 2.4e-55
Smith-Waterman score: 1812; 100.0% identity (100.0% similar) in 258 aa overlap (155-412:1-258)
130 140 150 160 170 180
pF1KE0 EGKQSRPCMEENELYSSAVTVGPHKEFAVTMRPTEASERCHLRGSYTLRAGESALELWGG
::::::::::::::::::::::::::::::
NP_958 MRPTEASERCHLRGSYTLRAGESALELWGG
10 20 30
190 200 210 220 230 240
pF1KE0 PEPGTQLYDWPYRFLRRFGRDKVTFSFEAGRRCVSGEGNFEFETRQGNEIFLALEEAISA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_958 PEPGTQLYDWPYRFLRRFGRDKVTFSFEAGRRCVSGEGNFEFETRQGNEIFLALEEAISA
40 50 60 70 80 90
250 260 270 280 290 300
pF1KE0 QKNAAPATPQPQPATIPASLPRPDSPYSRPHDSLPPPSPTTPVPAPRPRGQEGEYAVPFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_958 QKNAAPATPQPQPATIPASLPRPDSPYSRPHDSLPPPSPTTPVPAPRPRGQEGEYAVPFD
100 110 120 130 140 150
310 320 330 340 350 360
pF1KE0 AVARSLGKNFRGILAVPPQLLADPLYDSIEETLPPRPDHIYDEPEGVAALSLYDSPQEPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_958 AVARSLGKNFRGILAVPPQLLADPLYDSIEETLPPRPDHIYDEPEGVAALSLYDSPQEPR
160 170 180 190 200 210
370 380 390 400 410
pF1KE0 GEAWRRQATADRDPAGLQHVQPAGQDFSASGWQPGTEYDNVVLKKGPK
::::::::::::::::::::::::::::::::::::::::::::::::
NP_958 GEAWRRQATADRDPAGLQHVQPAGQDFSASGWQPGTEYDNVVLKKGPK
220 230 240 250
>>XP_011532958 (OMIM: 611435) PREDICTED: docking protein (440 aa)
initn: 566 init1: 262 opt: 677 Z-score: 428.2 bits: 88.3 E(85289): 4.1e-17
Smith-Waterman score: 729; 39.0% identity (57.2% similar) in 423 aa overlap (6-406:8-393)
10 20 30 40 50
pF1KE0 MGDGAVKQGFLYLQQQQTFGKK-WRRFGASLYGGSDCALARLELQE------GPEKPR
.:.:.:: ::. :::: ::. : ::.:. ..:::: : : :
XP_011 MDPLETPIKDGILY-QQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDR
10 20 30 40 50
60 70 80 90 100
pF1KE0 RC----EAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAAERGDWVQ
.. :.::::.::. : : :: : ::::.::.: : :: .:::: .: :.
XP_011 SAGPGRRGERRVIRLADCVSVLPADGE-SCPRDTGAFLLTTTERSHLLAAQ--HRQAWMG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 AICLLAFPGQRKELSGPEGKQSRPC-----MEENELYSSAVTVGPHKEFAVTMRPTEASE
:: ::::: . :: :: : :::: .::: :: :: :... :::.
XP_011 PICQLAFPGTGEASSGSTDAQS-PKRGLVPMEENSIYSSWQEVG---EFPVVVQRTEAAT
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 RCHLRGSYTLRAGESALELWGGPEPGTQ-LYDWPYRFLRRFGRDKVTFSFEAGRRCVSGE
::.:.: : : .:..: ::: ::.:::.:::.:: :: .::::::::: :::
XP_011 RCQLKGPALLVLGPDAIQL--REAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGE
180 190 200 210 220 230
230 240 250 260 270
pF1KE0 GNFEFETRQGNEIFLALEEAISAQKNAAPATPQPQPATIP--ASLPRPDSPYS-RPHDSL
: : : : . .. :. ::. :.. : .::: .: .::: :.: :
XP_011 GLFAFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREM---
240 250 260 270 280
280 290 300 310 320 330
pF1KE0 PPPSPTTPVPAPRPRGQEGEYAVPFDAVARSLGKNFRGILAVPPQLLADPLYDSI--EET
::.: :. .. : ..:. .:. :. ::. :: :. . .
XP_011 -PPGPEPPTSRKMHLAEPGPQSLPL-------------LLGPEPNDLASGLYASVCKRAS
290 300 310 320 330
340 350 360 370 380 390
pF1KE0 LPPRPDHIYDEPEGVAALSLYDSPQEPRGEAWRRQATADRDPAGLQHVQPAGQDFSASGW
:: .:.: :.. .: :: :: ... ..:.:. . . :::.: :
XP_011 GPPGNEHLY---ENLCVLEA--SPTLHGGEPEPHEGPGSRSPT-TSPIYHNGQDLS---W
340 350 360 370 380
400 410
pF1KE0 QPGTEYDNVVLKKGPK
:: :...
XP_011 -PGPANDSTLEAQYRRLLELDQVEGTGRPDPQAGFKAKLVTLLSRERRKGPAPCDRP
390 400 410 420 430 440
>>NP_001295164 (OMIM: 611435) docking protein 3 isoform (440 aa)
initn: 566 init1: 262 opt: 677 Z-score: 428.2 bits: 88.3 E(85289): 4.1e-17
Smith-Waterman score: 729; 39.0% identity (57.2% similar) in 423 aa overlap (6-406:8-393)
10 20 30 40 50
pF1KE0 MGDGAVKQGFLYLQQQQTFGKK-WRRFGASLYGGSDCALARLELQE------GPEKPR
.:.:.:: ::. :::: ::. : ::.:. ..:::: : : :
NP_001 MDPLETPIKDGILY-QQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDR
10 20 30 40 50
60 70 80 90 100
pF1KE0 RC----EAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAAERGDWVQ
.. :.::::.::. : : :: : ::::.::.: : :: .:::: .: :.
NP_001 SAGPGRRGERRVIRLADCVSVLPADGE-SCPRDTGAFLLTTTERSHLLAAQ--HRQAWMG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 AICLLAFPGQRKELSGPEGKQSRPC-----MEENELYSSAVTVGPHKEFAVTMRPTEASE
:: ::::: . :: :: : :::: .::: :: :: :... :::.
NP_001 PICQLAFPGTGEASSGSTDAQS-PKRGLVPMEENSIYSSWQEVG---EFPVVVQRTEAAT
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 RCHLRGSYTLRAGESALELWGGPEPGTQ-LYDWPYRFLRRFGRDKVTFSFEAGRRCVSGE
::.:.: : : .:..: ::: ::.:::.:::.:: :: .::::::::: :::
NP_001 RCQLKGPALLVLGPDAIQL--REAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGE
180 190 200 210 220 230
230 240 250 260 270
pF1KE0 GNFEFETRQGNEIFLALEEAISAQKNAAPATPQPQPATIP--ASLPRPDSPYS-RPHDSL
: : : : . .. :. ::. :.. : .::: .: .::: :.: :
NP_001 GLFAFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREM---
240 250 260 270 280
280 290 300 310 320 330
pF1KE0 PPPSPTTPVPAPRPRGQEGEYAVPFDAVARSLGKNFRGILAVPPQLLADPLYDSI--EET
::.: :. .. : ..:. .:. :. ::. :: :. . .
NP_001 -PPGPEPPTSRKMHLAEPGPQSLPL-------------LLGPEPNDLASGLYASVCKRAS
290 300 310 320 330
340 350 360 370 380 390
pF1KE0 LPPRPDHIYDEPEGVAALSLYDSPQEPRGEAWRRQATADRDPAGLQHVQPAGQDFSASGW
:: .:.: :.. .: :: :: ... ..:.:. . . :::.: :
NP_001 GPPGNEHLY---ENLCVLEA--SPTLHGGEPEPHEGPGSRSPT-TSPIYHNGQDLS---W
340 350 360 370 380
400 410
pF1KE0 QPGTEYDNVVLKKGPK
:: :...
NP_001 -PGPANDSTLEAQYRRLLELDQVEGTGRPDPQAGFKAKLVTLLSRERRKGPAPCDRP
390 400 410 420 430 440
>>XP_011532957 (OMIM: 611435) PREDICTED: docking protein (440 aa)
initn: 566 init1: 262 opt: 677 Z-score: 428.2 bits: 88.3 E(85289): 4.1e-17
Smith-Waterman score: 729; 39.0% identity (57.2% similar) in 423 aa overlap (6-406:8-393)
10 20 30 40 50
pF1KE0 MGDGAVKQGFLYLQQQQTFGKK-WRRFGASLYGGSDCALARLELQE------GPEKPR
.:.:.:: ::. :::: ::. : ::.:. ..:::: : : :
XP_011 MDPLETPIKDGILY-QQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDR
10 20 30 40 50
60 70 80 90 100
pF1KE0 RC----EAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAAERGDWVQ
.. :.::::.::. : : :: : ::::.::.: : :: .:::: .: :.
XP_011 SAGPGRRGERRVIRLADCVSVLPADGE-SCPRDTGAFLLTTTERSHLLAAQ--HRQAWMG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 AICLLAFPGQRKELSGPEGKQSRPC-----MEENELYSSAVTVGPHKEFAVTMRPTEASE
:: ::::: . :: :: : :::: .::: :: :: :... :::.
XP_011 PICQLAFPGTGEASSGSTDAQS-PKRGLVPMEENSIYSSWQEVG---EFPVVVQRTEAAT
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 RCHLRGSYTLRAGESALELWGGPEPGTQ-LYDWPYRFLRRFGRDKVTFSFEAGRRCVSGE
::.:.: : : .:..: ::: ::.:::.:::.:: :: .::::::::: :::
XP_011 RCQLKGPALLVLGPDAIQL--REAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGE
180 190 200 210 220 230
230 240 250 260 270
pF1KE0 GNFEFETRQGNEIFLALEEAISAQKNAAPATPQPQPATIP--ASLPRPDSPYS-RPHDSL
: : : : . .. :. ::. :.. : .::: .: .::: :.: :
XP_011 GLFAFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREM---
240 250 260 270 280
280 290 300 310 320 330
pF1KE0 PPPSPTTPVPAPRPRGQEGEYAVPFDAVARSLGKNFRGILAVPPQLLADPLYDSI--EET
::.: :. .. : ..:. .:. :. ::. :: :. . .
XP_011 -PPGPEPPTSRKMHLAEPGPQSLPL-------------LLGPEPNDLASGLYASVCKRAS
290 300 310 320 330
340 350 360 370 380 390
pF1KE0 LPPRPDHIYDEPEGVAALSLYDSPQEPRGEAWRRQATADRDPAGLQHVQPAGQDFSASGW
:: .:.: :.. .: :: :: ... ..:.:. . . :::.: :
XP_011 GPPGNEHLY---ENLCVLEA--SPTLHGGEPEPHEGPGSRSPT-TSPIYHNGQDLS---W
340 350 360 370 380
400 410
pF1KE0 QPGTEYDNVVLKKGPK
:: :...
XP_011 -PGPANDSTLEAQYRRLLELDQVEGTGRPDPQAGFKAKLVTLLSRERRKGPAPCDRP
390 400 410 420 430 440
>>XP_005266042 (OMIM: 611435) PREDICTED: docking protein (440 aa)
initn: 566 init1: 262 opt: 677 Z-score: 428.2 bits: 88.3 E(85289): 4.1e-17
Smith-Waterman score: 729; 39.0% identity (57.2% similar) in 423 aa overlap (6-406:8-393)
10 20 30 40 50
pF1KE0 MGDGAVKQGFLYLQQQQTFGKK-WRRFGASLYGGSDCALARLELQE------GPEKPR
.:.:.:: ::. :::: ::. : ::.:. ..:::: : : :
XP_005 MDPLETPIKDGILY-QQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDR
10 20 30 40 50
60 70 80 90 100
pF1KE0 RC----EAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAAERGDWVQ
.. :.::::.::. : : :: : ::::.::.: : :: .:::: .: :.
XP_005 SAGPGRRGERRVIRLADCVSVLPADGE-SCPRDTGAFLLTTTERSHLLAAQ--HRQAWMG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 AICLLAFPGQRKELSGPEGKQSRPC-----MEENELYSSAVTVGPHKEFAVTMRPTEASE
:: ::::: . :: :: : :::: .::: :: :: :... :::.
XP_005 PICQLAFPGTGEASSGSTDAQS-PKRGLVPMEENSIYSSWQEVG---EFPVVVQRTEAAT
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 RCHLRGSYTLRAGESALELWGGPEPGTQ-LYDWPYRFLRRFGRDKVTFSFEAGRRCVSGE
::.:.: : : .:..: ::: ::.:::.:::.:: :: .::::::::: :::
XP_005 RCQLKGPALLVLGPDAIQL--REAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGE
180 190 200 210 220 230
230 240 250 260 270
pF1KE0 GNFEFETRQGNEIFLALEEAISAQKNAAPATPQPQPATIP--ASLPRPDSPYS-RPHDSL
: : : : . .. :. ::. :.. : .::: .: .::: :.: :
XP_005 GLFAFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREM---
240 250 260 270 280
280 290 300 310 320 330
pF1KE0 PPPSPTTPVPAPRPRGQEGEYAVPFDAVARSLGKNFRGILAVPPQLLADPLYDSI--EET
::.: :. .. : ..:. .:. :. ::. :: :. . .
XP_005 -PPGPEPPTSRKMHLAEPGPQSLPL-------------LLGPEPNDLASGLYASVCKRAS
290 300 310 320 330
340 350 360 370 380 390
pF1KE0 LPPRPDHIYDEPEGVAALSLYDSPQEPRGEAWRRQATADRDPAGLQHVQPAGQDFSASGW
:: .:.: :.. .: :: :: ... ..:.:. . . :::.: :
XP_005 GPPGNEHLY---ENLCVLEA--SPTLHGGEPEPHEGPGSRSPT-TSPIYHNGQDLS---W
340 350 360 370 380
400 410
pF1KE0 QPGTEYDNVVLKKGPK
:: :...
XP_005 -PGPANDSTLEAQYRRLLELDQVEGTGRPDPQAGFKAKLVTLLSRERRKGPAPCDRP
390 400 410 420 430 440
>>XP_011532956 (OMIM: 611435) PREDICTED: docking protein (440 aa)
initn: 566 init1: 262 opt: 677 Z-score: 428.2 bits: 88.3 E(85289): 4.1e-17
Smith-Waterman score: 729; 39.0% identity (57.2% similar) in 423 aa overlap (6-406:8-393)
10 20 30 40 50
pF1KE0 MGDGAVKQGFLYLQQQQTFGKK-WRRFGASLYGGSDCALARLELQE------GPEKPR
.:.:.:: ::. :::: ::. : ::.:. ..:::: : : :
XP_011 MDPLETPIKDGILY-QQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDR
10 20 30 40 50
60 70 80 90 100
pF1KE0 RC----EAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAAERGDWVQ
.. :.::::.::. : : :: : ::::.::.: : :: .:::: .: :.
XP_011 SAGPGRRGERRVIRLADCVSVLPADGE-SCPRDTGAFLLTTTERSHLLAAQ--HRQAWMG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 AICLLAFPGQRKELSGPEGKQSRPC-----MEENELYSSAVTVGPHKEFAVTMRPTEASE
:: ::::: . :: :: : :::: .::: :: :: :... :::.
XP_011 PICQLAFPGTGEASSGSTDAQS-PKRGLVPMEENSIYSSWQEVG---EFPVVVQRTEAAT
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 RCHLRGSYTLRAGESALELWGGPEPGTQ-LYDWPYRFLRRFGRDKVTFSFEAGRRCVSGE
::.:.: : : .:..: ::: ::.:::.:::.:: :: .::::::::: :::
XP_011 RCQLKGPALLVLGPDAIQL--REAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGE
180 190 200 210 220 230
230 240 250 260 270
pF1KE0 GNFEFETRQGNEIFLALEEAISAQKNAAPATPQPQPATIP--ASLPRPDSPYS-RPHDSL
: : : : . .. :. ::. :.. : .::: .: .::: :.: :
XP_011 GLFAFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREM---
240 250 260 270 280
280 290 300 310 320 330
pF1KE0 PPPSPTTPVPAPRPRGQEGEYAVPFDAVARSLGKNFRGILAVPPQLLADPLYDSI--EET
::.: :. .. : ..:. .:. :. ::. :: :. . .
XP_011 -PPGPEPPTSRKMHLAEPGPQSLPL-------------LLGPEPNDLASGLYASVCKRAS
290 300 310 320 330
340 350 360 370 380 390
pF1KE0 LPPRPDHIYDEPEGVAALSLYDSPQEPRGEAWRRQATADRDPAGLQHVQPAGQDFSASGW
:: .:.: :.. .: :: :: ... ..:.:. . . :::.: :
XP_011 GPPGNEHLY---ENLCVLEA--SPTLHGGEPEPHEGPGSRSPT-TSPIYHNGQDLS---W
340 350 360 370 380
400 410
pF1KE0 QPGTEYDNVVLKKGPK
:: :...
XP_011 -PGPANDSTLEAQYRRLLELDQVEGTGRPDPQAGFKAKLVTLLSRERRKGPAPCDRP
390 400 410 420 430 440
>>NP_001295165 (OMIM: 611435) docking protein 3 isoform (440 aa)
initn: 566 init1: 262 opt: 677 Z-score: 428.2 bits: 88.3 E(85289): 4.1e-17
Smith-Waterman score: 729; 39.0% identity (57.2% similar) in 423 aa overlap (6-406:8-393)
10 20 30 40 50
pF1KE0 MGDGAVKQGFLYLQQQQTFGKK-WRRFGASLYGGSDCALARLELQE------GPEKPR
.:.:.:: ::. :::: ::. : ::.:. ..:::: : : :
NP_001 MDPLETPIKDGILY-QQHVKFGKKCWRKVWALLYAGGPSGVARLESWEVRDGGLGAAGDR
10 20 30 40 50
60 70 80 90 100
pF1KE0 RC----EAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAAERGDWVQ
.. :.::::.::. : : :: : ::::.::.: : :: .:::: .: :.
NP_001 SAGPGRRGERRVIRLADCVSVLPADGE-SCPRDTGAFLLTTTERSHLLAAQ--HRQAWMG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 AICLLAFPGQRKELSGPEGKQSRPC-----MEENELYSSAVTVGPHKEFAVTMRPTEASE
:: ::::: . :: :: : :::: .::: :: :: :... :::.
NP_001 PICQLAFPGTGEASSGSTDAQS-PKRGLVPMEENSIYSSWQEVG---EFPVVVQRTEAAT
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 RCHLRGSYTLRAGESALELWGGPEPGTQ-LYDWPYRFLRRFGRDKVTFSFEAGRRCVSGE
::.:.: : : .:..: ::: ::.:::.:::.:: :: .::::::::: :::
NP_001 RCQLKGPALLVLGPDAIQL--REAKGTQALYSWPYHFLRKFGSDKGVFSFEAGRRCHSGE
180 190 200 210 220 230
230 240 250 260 270
pF1KE0 GNFEFETRQGNEIFLALEEAISAQKNAAPATPQPQPATIP--ASLPRPDSPYS-RPHDSL
: : : : . .. :. ::. :.. : .::: .: .::: :.: :
NP_001 GLFAFSTPCAPDLCRAVAGAIARQRERLPELTRPQPCPLPRATSLPSLDTPGELREM---
240 250 260 270 280
280 290 300 310 320 330
pF1KE0 PPPSPTTPVPAPRPRGQEGEYAVPFDAVARSLGKNFRGILAVPPQLLADPLYDSI--EET
::.: :. .. : ..:. .:. :. ::. :: :. . .
NP_001 -PPGPEPPTSRKMHLAEPGPQSLPL-------------LLGPEPNDLASGLYASVCKRAS
290 300 310 320 330
340 350 360 370 380 390
pF1KE0 LPPRPDHIYDEPEGVAALSLYDSPQEPRGEAWRRQATADRDPAGLQHVQPAGQDFSASGW
:: .:.: :.. .: :: :: ... ..:.:. . . :::.: :
NP_001 GPPGNEHLY---ENLCVLEA--SPTLHGGEPEPHEGPGSRSPT-TSPIYHNGQDLS---W
340 350 360 370 380
400 410
pF1KE0 QPGTEYDNVVLKKGPK
:: :...
NP_001 -PGPANDSTLEAQYRRLLELDQVEGTGRPDPQAGFKAKLVTLLSRERRKGPAPCDRP
390 400 410 420 430 440
412 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:56:53 2016 done: Sat Nov 5 02:56:54 2016
Total Scan time: 9.240 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]