GENSCAN 1.0	Date run:  5-Nov-116	Time: 02:52:25

Sequence gi568815596r:121627727_121836850 : 209124 bp : 44.14% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -     67     62    6                               1.05
 1.05 Term -  15646  15598   49  0  1   81   34    84 0.064  -0.92
 1.04 Intr -  21992  21832  161  2  2   48   95    45 0.034  -0.01
 1.03 Intr -  34346  34225  122  0  2   66  111    26 0.554   2.91
 1.02 Intr -  42093  41960  134  2  2   83   89    46 0.021   4.49
 1.01 Init -  58719  58571  149  0  2   62   91   126 0.866   8.72
 1.00 Prom -  63506  63467   40                              -3.66

 2.03 PlyA -  63963  63958    6                               1.05
 2.02 Term -  67350  67238  113  1  2   92   45    14 0.876  -3.78
 2.01 Init -  67549  67399  151  1  1   44   90   152 0.580   9.21
 2.00 Prom -  67823  67784   40                              -4.56

 3.02 PlyA -  67973  67968    6                               1.05
 3.01 Sngl -  81338  80856  483  2  0   64   41   520 0.193  40.98
 3.00 Prom -  93802  93763   40                              -2.36

 4.09 PlyA -  95564  95559    6                               1.05
 4.08 Term - 100186  99998  189  1  0   56   34   147 0.873   3.55
 4.07 Intr - 100630 100562   69  1  0   45   98    76 0.926   3.68
 4.06 Intr - 103378 103167  212  2  2   73   27   121 0.981   3.13
 4.05 Intr - 104478 104370  109  0  1   97   84   157 0.989  16.06
 4.04 Intr - 108024 107887  138  0  0   80   90     4 0.555   0.46
 4.03 Intr - 109073 109020   54  2  0  107   99   102 0.830  12.38
 4.02 Intr - 116027 115729  299  0  2   22   34   189 0.032   3.49
 4.01 Init - 128055 127728  328  0  1  103   18   195 0.230  11.49
 4.00 Prom - 128387 128348   40                              -7.76

 5.00 Prom + 129015 129054   40                              -3.66
 5.01 Init + 129690 129708   19  2  1   72  101    19 0.363   0.83
 5.02 Intr + 130984 131080   97  2  1   52   72    44 0.414  -1.73
 5.03 Intr + 133683 133798  116  0  2   62   92    81 0.859   5.99
 5.04 Intr + 135279 135358   80  1  2   88  107    58 0.999   6.97
 5.05 Term + 137408 137641  234  1  0   61   49   389 0.999  28.62
 5.06 PlyA + 138746 138751    6                               1.05

 6.03 PlyA - 142137 142132    6                               1.05
 6.02 Term - 144974 144825  150  2  0   92   38    66 0.406  -0.09
 6.01 Init - 154580 154440  141  2  0   34   91    88 0.124   3.83
 6.00 Prom - 159299 159260   40                              -0.76

 7.00 Prom + 159807 159846   40                              -4.46
 7.01 Init + 162296 162352   57  1  0   73   64    43 0.596   1.71
 7.02 Intr + 168588 168707  120  2  0  117   36    39 0.181   2.29
 7.03 Intr + 168931 168994   64  0  1   71  106     0 0.193  -1.61
 7.04 Intr + 170851 170979  129  2  0  120   70    47 0.159   6.77
 7.05 Intr + 189178 189268   91  2  1   39   92    49 0.017  -0.55
 7.06 Term + 192211 192238   28  1  1  102   52    49 0.033   0.25
 7.07 PlyA + 195193 195198    6                               1.05

 8.03 PlyA - 195247 195242    6                               1.05
 8.02 Term - 198450 198250  201  0  0   58   47   100 0.505   0.29
 8.01 Init - 204418 204104  315  1  0   62   55   113 0.294   2.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  42164  41960  205  2  1   99   89    56 0.816   6.08
S.002 Term +  62892  62960   69  2  0  123   54     9 0.935  -1.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:121627727_121836850|GENSCAN_predicted_peptide_1|204_aa
MRILRVLPGRHLPQWNALPEQRVAGPGGGSTQWLNTGKEQALGVRTSETCSSLSPPISAR
QSLRPVKIITQFSWKLISPCDPAQILPTVFLNGLVTATTVFKDEHSSSITPLHMGKPITV
NQTSVFSPTVGGTYQGQLTFSVRGKAPGDFTPAKPNTARPAPARGVTIERQPPLWSRFTL
SMVYPGWWRYIILAYIEVVAFEVF

>gi568815596r:121627727_121836850|GENSCAN_predicted_CDS_1|615_bp
atgcggatcctgagagtgctcccgggtaggcatttgccccagtggaacgccttgccagag
cagcgcgtggcaggccccggtggaggatcaacgcagtggctgaacaccgggaaggaacag
gcacttggagtccggacatctgaaacttgcagttcactttcacccccgatttctgctcga
cagagtttgcgcccagtcaaaattattacacagttcagttggaagcttatttcaccctgc
gaccctgcccaaattctgccaactgtcttcctcaatggcctcgtaactgctactacagtg
tttaaagacgagcatagcagcagcataacacctttgcacatggggaaacccataacagtg
aaccaaacatctgtattttctcctacagtgggtggtacttaccagggtcaactaacgttc
tccgtgaggggcaaagctcccggggactttacgccagcgaagcctaacacggccaggcca
gcgcctgcgcggggcgttaccatagagaggcagccgcctctctggtctcggtttacgctc
tctatggtgtacccgggttggtggcgctacatcatcttggcttatattgaagttgtggct
tttgaagtcttctag

>gi568815596r:121627727_121836850|GENSCAN_predicted_peptide_2|87_aa
MLTLVPLTFPQACLSPLVSLGLDCPLPLEMFIIKSFTDQNHSSYLQCRKEGIFSQVVTEP
GKKPFAMTSLYPTSTRVPGLFLALGDP

>gi568815596r:121627727_121836850|GENSCAN_predicted_CDS_2|264_bp
atgctgacattggtgcctctcaccttccctcaggcctgcctctctcccctagtgagcctc
ggcctagactgcccacttccactggagatgttcatcatcaagtcatttacagatcaaaac
cacagttcttacctgcagtgccggaaggagggaatattctcccaggttgtgacagagccc
ggaaaaaagccatttgcgatgacctcactgtacccgacttctaccagagtccctggcctt
tttctggcccttggtgatccctga

>gi568815596r:121627727_121836850|GENSCAN_predicted_peptide_3|160_aa
MNYKGSPIKVTLATLKMSVQPKDSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVEEDAE
SEDEEEEDVKLLSVSGKRSARGGGSKIPQKKVKVAADEDEDDDDEDFDDGEAEEKAPVKK
SIRDTPAKNAQKSNQNGKDSKPSTPRSKGQDSFKKTGKNF

>gi568815596r:121627727_121836850|GENSCAN_predicted_CDS_3|483_bp
atgaattacaaaggcagtccaattaaagtaacactggcaactttgaaaatgtctgtacag
ccaaaggattcccttggaggctttgaaatcacaccaccagtggtcttacggttgaagtgt
ggttcagggccagtgcatattagtggacagcacttagtagctgtggaggaagatgcagag
tcagaagatgaagaggaggaggatgtgaaactcttaagtgtatctggaaagcggtcggcc
cgtggaggtggtagcaagattccacagaaaaaagtaaaagttgctgctgatgaagatgaa
gatgatgatgatgaggattttgatgatggggaagctgaagaaaaagcgccggtgaagaaa
tccatacgagatactccagccaaaaatgcacaaaagtcaaatcagaatggaaaagactca
aaaccgtcaacaccaagatcaaaaggacaagactccttcaaaaaaacaggaaaaaacttc
taa

>gi568815596r:121627727_121836850|GENSCAN_predicted_peptide_4|465_aa
MAPAAQQSASVARAAKEVDAAGNQRNQSQRPPLPPRPPGLTPRPSLGSSEARGAPEDGLS
AALPEAPSAAFGTEARVQRAEERESGRGLSLRPSDRHRQKQPAKAALGAPWATRVKVRLK
KRKKKKKKQRKGKERKAKGKGKEHAKDRKYSQVLDNGLDNKFHEDLEQLKEIQAHRGLCH
FWGLCVQSQHAKTTGSWGNTVVCPGRNKSEDVEFQKEVAQVRKRITQRKKQEQLTPGVVY
VRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMNN
YLFGERLLECHFMPPEKVHKELFKDWNIPFKQPSYPSVKRYNRNRTLTQKLRMEERFKKK
ERLLRKKLAKKGIDYDFPSLVLRKKKKKVSGTLDTPEKTVDSQGPTPVCTPTFLERRKSQ
VAELNDDDKDDEIVFKQPISCVKEEIQETQTPTHSRKKRRRSSNQ

>gi568815596r:121627727_121836850|GENSCAN_predicted_CDS_4|1398_bp
atggcgccggctgcacaacaatcagccagtgtagcaagggcggccaaggaagtggacgcc
gcaggcaaccagcgcaatcaatcgcaacggccgccgctaccgccgcgtccccccggtctt
acgccacgaccgtcgctagggtcctccgaggctcgcggcgcgccggaggacgggctgtcc
gccgcgctgcctgaggcgccgtccgctgcgttcggaaccgaggcgcgcgtccaaagggca
gaggagagggagagtgggcggggcctcagtctgaggccttcagacaggcatcgccagaaa
caacctgcgaaggcggccctcggagcaccctgggcaacaagagtgaaagtccgtctcaaa
aaaaggaaaaagaaaaagaaaaaacaaaggaaaggaaaagaaaggaaagcaaagggaaaa
ggaaaggagcatgcaaaggataggaaatatagccaggtcctagacaatggtctggacaac
aagttccacgaggacctggagcaactaaaggagattcaggcccacagagggctgtgccac
ttctggggcctttgtgtccagagccagcacgccaagaccactggcagctggggcaatact
gtggtctgtccaggaagaaataagtctgaagatgtcgagtttcaaaaggaggtggcgcag
gttcgcaagcgcataacccagcgaaaaaaacaagaacaacttactcctggagtagtctat
gtgcgccacctacctaacctacttgacgaaacccagatcttttcatatttctcccagttt
ggcactgtgacacggttcaggctgtccagaagtaaaaggactggaaatagcaaaggctat
gcatttgtggagtttgagtctgaggatgttgccaaaatagttgctgaaacaatgaacaac
tacctgtttggtgaaagactcttggagtgtcattttatgccacctgaaaaagtacataaa
gaactctttaaagactggaatattccatttaagcagccatcatatccatcagtgaaacgg
tataatcggaatcggacactaacacaaaagctacggatggaggagcgatttaaaaagaaa
gaaagattactcaggaagaaattagctaaaaaaggaattgactatgattttccttctttg
gttttacgtaagaagaagaaaaaagtttcaggtactcttgacactcctgagaagactgtg
gatagccagggccccacaccagtttgtacaccaacatttttggagaggcgaaaatctcaa
gtggctgaactgaatgatgatgataaagatgatgaaatagttttcaaacagcccatatcc
tgtgtaaaagaagaaatacaagagactcaaacacctacacattcacggaaaaaaagacga
agaagcagcaatcagtga

>gi568815596r:121627727_121836850|GENSCAN_predicted_peptide_5|181_aa
MAIMLYVPKRCLKAREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVY
LETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRP
LHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACVE
K

>gi568815596r:121627727_121836850|GENSCAN_predicted_CDS_5|546_bp
atggctatcatgctttatgttccaaagaggtgtttgaaagctcgagaacattttggtaca
gtaaaaacacatctaacatctttgaagaccaaatttcctgctgaacagtattacagattt
catgagcactggaggtttgtgttgcagcgcttggtcttcttggcagcatttgttgtgtat
ttggaaacagaaacactagtgactcgagaagcagttacagaaattcttggcattgagcca
gatcgggagaaaggatttcatctggatgtagaagattatctctcaggagttctaattctt
gccagtgaactgtcgaggctgtctgtcaacagcgtgactgctggagactactcccgaccc
ctccacatctccaccttcatcaatgagctggattccggttttcgccttctcaacctgaaa
aatgactccctgaggaagcgctacgacggattgaaatatgacgtgaagaaagtagaggaa
gtggtctatgatctctccatccggggctttaataaggagacggcagcagcttgtgttgaa
aaatag

>gi568815596r:121627727_121836850|GENSCAN_predicted_peptide_6|96_aa
MIHRTLGTREKDRGLVRDKRLQIGHSARSSGRGYTKILEITTKELIQKVKANILPFVLPN
CEKLSGLTSIVRVSKGFLKGSSDSRDVAEEAEGGSF

>gi568815596r:121627727_121836850|GENSCAN_predicted_CDS_6|291_bp
atgatacatcggactttgggaactcgggagaaagatcgggggctggtgagggataaaaga
ctacaaattggccacagtgcacgctcctcaggtcgtgggtacaccaaaatcttagaaatc
accactaaagaacttattcagaaagtaaaagcaaacatcctgccctttgtacttcccaac
tgtgaaaaattatctggcttaacttccattgtcagggtgagcaaagggttcctcaaagga
agctctgacagcagggacgtggcagaggaagctgaagggggatctttctga

>gi568815596r:121627727_121836850|GENSCAN_predicted_peptide_7|162_aa
MERRPEGKLESVNSDDAQIVFKSPTPVRHFCGFPGSLTLLLQAAGFDSEQFLCSHKDSYI
SPLCMSVSLLPLLMKTPVMLELMVAMCPLIGVFLALNVLFSASRNVQTFIQQPVWANESG
MVPGHFCLRGGRPIITQLALPPQVQGATSPDGCGSPAVFLRA

>gi568815596r:121627727_121836850|GENSCAN_predicted_CDS_7|489_bp
atggaacgaaggccagaaggaaaactcgaaagtgttaacagtgatgacgctcagatagtc
ttcaaaagcccaacacctgttcgtcatttctgtggcttcccagggagtcttactcttctg
cttcaagctgctgggtttgactctgagcagtttctgtgcagccacaaagattcttatatc
tctcctctgtgcatgtcagtgtccttgcttcctcttcttatgaagacaccggtcatgttg
gagctcatggttgcaatgtgcccgcttatcggagtcttcctggccttgaatgtcctcttc
tcagcatccaggaatgtccagacattcatccaacaaccagtctgggctaatgagtcaggc
atggtgcctggacacttctgcctgcgtgggggaaggcccatcatcacccagctggcactc
ccgccccaggtgcagggagccaccagcccggatggctgtggttcaccagccgtgttcctg
cgggcctga

>gi568815596r:121627727_121836850|GENSCAN_predicted_peptide_8|171_aa
MGLSPHLSDDNISGLGWRLRSQPVTPIHPLSVEPAGKQDPAPRSARDSEGVVSALLSAAS
HQAPAQESSSIRPSGGSRFPEADSEMRICEQVNYEGVLLGKTCQGRAAPAQSLGNTCGSR
KEVSGPVLEVERGDRGFKMSQLVPLGQNPEPSFGAAGFLVPVSRVIKSEIT

>gi568815596r:121627727_121836850|GENSCAN_predicted_CDS_8|516_bp
atgggcctctctccacatctgtctgatgacaacatctctggcttgggctggagactgagg
tcccagccagtcacacccatccacccactctccgtggagcctgcaggcaagcaggatcca
gctcctcggtctgccagggactcggagggagtggtctcggccctgctctcagctgcctcc
catcaagctccagcgcaagagtccagcagcatcaggccgtctggtgggtcacgtttccca
gaagcagactctgagatgagaatttgtgaacaagtgaattatgaaggcgtgctcctgggg
aaaacctgtcagggacgtgcagctcctgctcagagtctgggaaatacttgtggctctaga
aaagaagtcagtggccctgtgctagaagtggagagaggggacagaggcttcaagatgagc
cagcttgtgcccctgggacagaatcctgaaccaagcttcggagctgccggattcctggtc
cctgtttcccgcgtgattaaatctgaaattacttga